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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0523200 |
| Transcript ID | Lj5g3v0523200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: two-component response regulator ARR12-like [Glycine max] gi|356562101|ref|XP_003549312.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 20 | 141 | 122 | 1.17E-31 | ||
| Gene3D | 20 | 158 | 139 | 1.60E-38 | – | |
| SMART | 21 | 133 | 113 | 3.80E-26 | ||
| PANTHER | 21 | 279 | 259 | 4.30E-184 | – | |
| PANTHER | 21 | 279 | 259 | 4.30E-184 | – | |
| ProSiteProfiles | 22 | 137 | 116 | 38.694 | ||
| Pfam | 23 | 132 | 110 | 2.80E-21 | ||
| CDD | 24 | 136 | 113 | 3.01E-22 | – | |
| MobiDBLite | 138 | 208 | 71 | – | – | |
| Gene3D | 206 | 267 | 62 | 1.90E-28 | ||
| ProSiteProfiles | 206 | 265 | 60 | 10.277 | ||
| SUPERFAMILY | 207 | 266 | 60 | 2.51E-18 | ||
| TIGRFAM | 209 | 262 | 54 | 7.50E-24 | ||
| Pfam | 211 | 261 | 51 | 4.20E-06 | ||
| PANTHER | 296 | 399 | 104 | 4.30E-184 | – | |
| PANTHER | 296 | 399 | 104 | 4.30E-184 | – | |
| MobiDBLite | 491 | 527 | 37 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of Lj5g3v0523200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0523200.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.