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Lj5g3v0890630.1

Overview

Field Value
Gene ID Lj5g3v0890630
Transcript ID Lj5g3v0890630.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: guanylate kinase-like [Glycine max] gi|356504801|ref|XP_003521183.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF50965
11 100 90 9.94E-07
IPR011043
Gene3D
G3DSA:2.120.10.80
11 96 86 6.10E-05
IPR015915
PANTHER
PTHR23117
84 349 266 4.10E-150 –
PANTHER
PTHR23117:SF13
84 349 266 4.10E-150 –
SMART
SM00072
123 309 187 3.90E-83
IPR008145
Gene3D
G3DSA:3.40.50.300
124 146 23 7.40E-49
IPR027417
Pfam
PF00625
124 305 182 1.30E-58
IPR008145
ProSiteProfiles
PS50052
124 306 183 43.288
IPR008144
TIGRFAM
TIGR03263
125 305 181 1.50E-62
IPR017665
SUPERFAMILY
SSF52540
125 305 181 3.88E-62
IPR027417
CDD
cd00071
126 302 177 7.09E-64 –
Gene3D
G3DSA:3.30.63.10
154 206 53 3.00E-26 –
ProSitePatterns
PS00856
159 176 18 –
IPR020590
Gene3D
G3DSA:3.40.50.300
207 305 99 7.40E-49
IPR027417

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004385
Molecular function Guanylate kinase activity Catalysis of the reaction: ATP + GMP = ADP + GDP.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0006163
Biological process Purine nucleotide metabolic process The chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Subterm of

Genome browser

LORE1 insertions 36

Expression data

Expression pattern

Expression pattern of Lj5g3v0890630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0890630.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.