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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1014710 |
| Transcript ID | Lj5g3v1014710.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: BEACH domain-containing protein lvsA-like isoform X1 [Cicer arietinum] gi|502115252|ref|XP_004495161.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 29 | 29 | – | – | |
| MobiDBLite | 15 | 62 | 48 | – | – | |
| SUPERFAMILY | 176 | 210 | 35 | 5.23E-06 | ||
| SUPERFAMILY | 242 | 333 | 92 | 5.23E-06 | ||
| Gene3D | 244 | 313 | 70 | 7.60E-04 | ||
| MobiDBLite | 406 | 428 | 23 | – | – | |
| PANTHER | 424 | 747 | 324 | 0 | – | |
| PANTHER | 424 | 747 | 324 | 0 | – | |
| MobiDBLite | 450 | 478 | 29 | – | – | |
| Gene3D | 492 | 513 | 22 | 7.60E-04 | ||
| SUPERFAMILY | 492 | 633 | 142 | 5.23E-06 | ||
| Gene3D | 594 | 632 | 39 | 7.60E-04 | ||
| Gene3D | 685 | 732 | 48 | 7.60E-04 | ||
| Gene3D | 780 | 818 | 39 | 7.60E-04 | ||
| Gene3D | 936 | 992 | 57 | 7.60E-04 | ||
| PANTHER | 968 | 1495 | 528 | 0 | – | |
| PANTHER | 968 | 1495 | 528 | 0 | – | |
| Gene3D | 1133 | 1237 | 105 | 1.40E-06 | ||
| SUPERFAMILY | 1136 | 1281 | 146 | 1.80E-10 | ||
| Pfam | 1139 | 1263 | 125 | 2.40E-07 | – | |
| PANTHER | 1571 | 2030 | 460 | 0 | – | |
| PANTHER | 1571 | 2030 | 460 | 0 | – | |
| MobiDBLite | 1988 | 2030 | 43 | – | – | |
| PANTHER | 2050 | 2309 | 260 | 0 | – | |
| PANTHER | 2050 | 2309 | 260 | 0 | – | |
| PANTHER | 2330 | 2848 | 519 | 0 | – | |
| PANTHER | 2330 | 2848 | 519 | 0 | – | |
| MobiDBLite | 2728 | 2753 | 26 | – | – | |
| SUPERFAMILY | 2784 | 2827 | 44 | 3.87E-17 | ||
| Gene3D | 2784 | 2826 | 43 | 3.10E-15 | ||
| CDD | 2784 | 2948 | 165 | 3.07E-25 | – | |
| PANTHER | 2877 | 3525 | 649 | 0 | – | |
| PANTHER | 2877 | 3525 | 649 | 0 | – | |
| Gene3D | 2886 | 2946 | 61 | 3.10E-15 | ||
| Pfam | 2887 | 2946 | 60 | 1.20E-08 | ||
| SUPERFAMILY | 2898 | 2949 | 52 | 3.87E-17 | ||
| ProSiteProfiles | 2972 | 3264 | 293 | 136.471 | ||
| Gene3D | 2980 | 3264 | 285 | 3.20E-130 | ||
| SUPERFAMILY | 2982 | 3264 | 283 | 5.36E-121 | ||
| SMART | 2984 | 3264 | 281 | 1.40E-202 | ||
| Pfam | 2985 | 3264 | 280 | 9.10E-121 | ||
| CDD | 2985 | 3264 | 280 | 2.73E-149 | ||
| SUPERFAMILY | 3317 | 3519 | 203 | 6.16E-34 | ||
| Gene3D | 3317 | 3599 | 283 | 7.00E-38 | ||
| SMART | 3337 | 3378 | 42 | 0.0023 | ||
| ProSiteProfiles | 3346 | 3437 | 92 | 15.267 | ||
| Pfam | 3348 | 3377 | 30 | 0.014 | ||
| ProSiteProfiles | 3353 | 3379 | 27 | 9.071 | ||
| SMART | 3389 | 3428 | 40 | 4.00E-07 | ||
| Pfam | 3394 | 3428 | 35 | 6.60E-05 | ||
| ProSiteProfiles | 3396 | 3437 | 42 | 13.182 | ||
| ProSitePatterns | 3415 | 3429 | 15 | – | ||
| SMART | 3481 | 3518 | 38 | 460 | ||
| SUPERFAMILY | 3549 | 3599 | 51 | 6.16E-34 | ||
| SMART | 3550 | 3589 | 40 | 0.75 | ||
| PANTHER | 3550 | 3596 | 47 | 0 | – | |
| PANTHER | 3550 | 3596 | 47 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1014710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1014710.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.