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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1302260 |
| Transcript ID | Lj5g3v1302260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: subtilisin-like protease-like [Glycine max] gi|356533680|ref|XP_003535388.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 761 | 761 | 0 | ||
| SignalP | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 761 | 761 | 0 | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 14 | 24 | 11 | – | – | |
| Phobius | 25 | 28 | 4 | – | – | |
| Phobius | 29 | 762 | 734 | – | – | |
| Gene3D | 32 | 98 | 67 | 9.40E-04 | ||
| Pfam | 33 | 116 | 84 | 3.20E-15 | ||
| Gene3D | 99 | 347 | 249 | 1.00E-73 | ||
| CDD | 116 | 578 | 463 | 4.04E-131 | – | |
| SUPERFAMILY | 118 | 161 | 44 | 1.57E-75 | ||
| Pfam | 141 | 583 | 443 | 2.90E-48 | ||
| PRINTS | 141 | 160 | 20 | 7.50E-16 | ||
| SUPERFAMILY | 188 | 370 | 183 | 1.57E-75 | ||
| PRINTS | 218 | 231 | 14 | 7.50E-16 | ||
| CDD | 353 | 472 | 120 | 2.43E-18 | – | |
| Gene3D | 481 | 616 | 136 | 1.00E-73 | ||
| SUPERFAMILY | 487 | 616 | 130 | 1.57E-75 | ||
| PRINTS | 541 | 557 | 17 | 7.50E-16 | ||
| ProSitePatterns | 542 | 552 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj5g3v1302260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1302260.1, powered by CORGI.
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