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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1513590 |
| Transcript ID | Lj5g3v1513590.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: importin subunit alpha-1b-like isoform X1 [Cicer arietinum] gi|502117024|ref|XP_004495674.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 60 | 60 | 15.192 | ||
| PANTHER | 1 | 534 | 534 | 0 | – | |
| PANTHER | 1 | 534 | 534 | 0 | – | |
| PIRSF | 6 | 533 | 528 | 1.20E-219 | ||
| Pfam | 14 | 97 | 84 | 5.20E-23 | ||
| Gene3D | 14 | 500 | 487 | 1.30E-138 | ||
| SUPERFAMILY | 15 | 502 | 488 | 6.91E-132 | ||
| MobiDBLite | 47 | 66 | 20 | – | – | |
| SMART | 107 | 148 | 42 | 6.50E-07 | ||
| Pfam | 109 | 148 | 40 | 9.50E-09 | ||
| CDD | 112 | 233 | 122 | 1.72E-34 | – | |
| ProSiteProfiles | 118 | 161 | 44 | 10.132 | ||
| SMART | 150 | 190 | 41 | 2.10E-11 | ||
| Pfam | 150 | 189 | 40 | 2.30E-13 | ||
| ProSiteProfiles | 161 | 203 | 43 | 11.427 | ||
| SMART | 191 | 233 | 43 | 0.31 | ||
| Pfam | 192 | 233 | 42 | 6.80E-08 | ||
| SMART | 235 | 274 | 40 | 0.0093 | ||
| ProSiteProfiles | 245 | 287 | 43 | 10.027 | ||
| Pfam | 246 | 273 | 28 | 1.80E-07 | ||
| CDD | 246 | 359 | 114 | 7.94E-34 | – | |
| SMART | 276 | 316 | 41 | 8.00E-07 | ||
| Pfam | 277 | 315 | 39 | 3.90E-09 | ||
| SMART | 318 | 359 | 42 | 2.00E-08 | ||
| Pfam | 319 | 359 | 41 | 3.50E-09 | ||
| SMART | 361 | 401 | 41 | 2.80E-08 | ||
| Pfam | 361 | 400 | 40 | 1.30E-11 | ||
| CDD | 366 | 497 | 132 | 2.19E-23 | – | |
| SMART | 404 | 444 | 41 | 6.70E-06 | ||
| Pfam | 406 | 442 | 37 | 6.00E-07 | ||
| Pfam | 459 | 503 | 45 | 1.90E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Protein import into nucleus | The directed movement of a protein from the cytoplasm to the nucleus. | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. | ||
| Molecular function | Nuclear import signal receptor activity | Combining with a nuclear import signal (NIS) on a cargo to be transported, to mediate transport of the cargo through the nuclear pore, from the cytoplasm to the nuclear lumen. The cargo can be either a RNA or a protein. |
Expression pattern of Lj5g3v1513590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1513590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.