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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1961200 |
| Transcript ID | Lj5g3v1961200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 662 | 662 | 0 | – | |
| PANTHER | 1 | 662 | 662 | 0 | – | |
| Phobius | 1 | 99 | 99 | – | – | |
| Pfam | 100 | 343 | 244 | 6.00E-26 | ||
| Phobius | 100 | 118 | 19 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| SUPERFAMILY | 102 | 396 | 295 | 1.57E-46 | ||
| Gene3D | 104 | 398 | 295 | 1.50E-52 | – | |
| ProSiteProfiles | 105 | 379 | 275 | 29.765 | ||
| Phobius | 119 | 137 | 19 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 138 | 158 | 21 | – | – | |
| Phobius | 159 | 169 | 11 | – | – | |
| Phobius | 170 | 186 | 17 | – | – | |
| Phobius | 187 | 226 | 40 | – | – | |
| TMHMM | 227 | 249 | 23 | – | – | |
| Phobius | 227 | 249 | 23 | – | – | |
| Phobius | 250 | 327 | 78 | – | – | |
| Phobius | 328 | 346 | 19 | – | – | |
| Phobius | 347 | 351 | 5 | – | – | |
| Phobius | 352 | 371 | 20 | – | – | |
| Phobius | 372 | 662 | 291 | – | – | |
| SUPERFAMILY | 406 | 643 | 238 | 2.15E-66 | ||
| CDD | 414 | 634 | 221 | 7.61E-133 | – | |
| Gene3D | 417 | 652 | 236 | 5.50E-64 | ||
| ProSiteProfiles | 418 | 650 | 233 | 16.42 | ||
| Pfam | 433 | 581 | 149 | 6.50E-29 | ||
| SMART | 442 | 634 | 193 | 6.50E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v1961200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1961200.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.