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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1986530 |
| Transcript ID | Lj5g3v1986530.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Receptor-like protein kinase [Medicago truncatula] gi|358348670|ref|XP_003638367.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 62 | 50 | 8.50E-189 | – | |
| Gene3D | 17 | 230 | 214 | 1.50E-42 | ||
| SUPERFAMILY | 18 | 134 | 117 | 6.01E-21 | ||
| SMART | 21 | 46 | 26 | 230 | ||
| SMART | 47 | 69 | 23 | 4.5 | ||
| Pfam | 49 | 103 | 55 | 2.40E-06 | ||
| ProSiteProfiles | 49 | 70 | 22 | 7.535 | ||
| ProSiteProfiles | 71 | 91 | 21 | 4.863 | ||
| PANTHER | 83 | 458 | 376 | 8.50E-189 | – | |
| ProSiteProfiles | 92 | 113 | 22 | 4.77 | ||
| SUPERFAMILY | 96 | 452 | 357 | 2.31E-61 | – | |
| SMART | 114 | 136 | 23 | 3.1 | ||
| Pfam | 116 | 137 | 22 | 0.17 | ||
| ProSiteProfiles | 116 | 138 | 23 | 6.711 | ||
| Pfam | 139 | 196 | 58 | 2.60E-10 | ||
| SMART | 160 | 183 | 24 | 14 | ||
| ProSiteProfiles | 162 | 184 | 23 | 6.31 | ||
| ProSiteProfiles | 185 | 204 | 20 | 5.302 | ||
| SMART | 210 | 233 | 24 | 78 | ||
| ProSiteProfiles | 212 | 233 | 22 | 5.279 | ||
| Gene3D | 240 | 453 | 214 | 2.00E-57 | ||
| ProSiteProfiles | 240 | 263 | 24 | 6.18 | ||
| Pfam | 241 | 253 | 13 | 1.4 | ||
| ProSiteProfiles | 264 | 285 | 22 | 5.032 | ||
| Pfam | 264 | 286 | 23 | 1 | ||
| SMART | 286 | 301 | 16 | 120 | – | |
| SMART | 286 | 310 | 25 | 28 | ||
| Pfam | 287 | 347 | 61 | 7.40E-08 | ||
| ProSiteProfiles | 288 | 310 | 23 | 5.717 | ||
| PRINTS | 289 | 302 | 14 | 1.50E-05 | – | |
| SMART | 310 | 333 | 24 | 590 | – | |
| ProSiteProfiles | 312 | 332 | 21 | 6.28 | ||
| SMART | 334 | 358 | 25 | 13 | ||
| ProSiteProfiles | 336 | 358 | 23 | 5.486 | ||
| ProSiteProfiles | 360 | 382 | 23 | 5.602 | ||
| SUPERFAMILY | 385 | 529 | 145 | 1.47E-38 | ||
| ProSiteProfiles | 408 | 431 | 24 | 5.417 | ||
| SMART | 430 | 454 | 25 | 52 | ||
| ProSiteProfiles | 432 | 454 | 23 | 5.271 | ||
| Coils | 459 | 459 | 1 | – | – | |
| ProSiteProfiles | 480 | 502 | 23 | 5.402 | ||
| Gene3D | 480 | 529 | 50 | 1.80E-34 | ||
| PANTHER | 481 | 681 | 201 | 8.50E-189 | – | |
| SMART | 502 | 528 | 27 | 120 | – | |
| SMART | 502 | 526 | 25 | 24 | ||
| PRINTS | 502 | 515 | 14 | 1.50E-05 | – | |
| ProSiteProfiles | 504 | 527 | 24 | 6.079 | ||
| Gene3D | 580 | 669 | 90 | 1.80E-34 | ||
| SUPERFAMILY | 581 | 673 | 93 | 1.47E-38 | ||
| Pfam | 602 | 638 | 37 | 3.70E-07 | ||
| ProSiteProfiles | 603 | 625 | 23 | 6.334 | ||
| SMART | 625 | 649 | 25 | 35 | ||
| SMART | 625 | 657 | 33 | 33 | – | |
| ProSiteProfiles | 627 | 649 | 23 | 6.403 | ||
| ProSiteProfiles | 651 | 674 | 24 | 5.055 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1986530.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1986530.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.