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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2217170 |
| Transcript ID | Lj5g3v2217170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1 [Cicer arietinum] gi|502120866|ref|XP_004497109.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 543 | 543 | 0 | – | |
| PANTHER | 1 | 543 | 543 | 0 | – | |
| Gene3D | 3 | 544 | 542 | 5.30E-136 | ||
| SUPERFAMILY | 6 | 544 | 539 | 1.06E-98 | ||
| ProSiteProfiles | 8 | 46 | 39 | 9.815 | ||
| ProSiteProfiles | 162 | 200 | 39 | 8.747 | ||
| ProSiteProfiles | 201 | 239 | 39 | 9.983 | ||
| Pfam | 240 | 268 | 29 | 2.50E-04 | ||
| ProSiteProfiles | 240 | 278 | 39 | 13.552 | ||
| ProSiteProfiles | 279 | 317 | 39 | 12.85 | ||
| ProSiteProfiles | 318 | 356 | 39 | 12.288 | ||
| ProSiteProfiles | 357 | 395 | 39 | 12.035 | ||
| Pfam | 364 | 458 | 95 | 3.00E-10 | – | |
| ProSiteProfiles | 396 | 434 | 39 | 11.669 | ||
| ProSiteProfiles | 474 | 512 | 39 | 10.011 | ||
| ProSiteProfiles | 513 | 547 | 35 | 10.573 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2217170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2217170.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.