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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2264090 |
| Transcript ID | Lj5g3v2264090.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Glycine max] gi|356575371|ref|XP_003555815.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 19 | 18 | 0 | – | |
| PANTHER | 2 | 19 | 18 | 0 | ||
| PANTHER | 35 | 1023 | 989 | 0 | ||
| PANTHER | 35 | 1023 | 989 | 0 | – | |
| PIRSF | 62 | 1016 | 955 | 0 | ||
| Pfam | 67 | 106 | 40 | 2.90E-16 | ||
| TIGRFAM | 69 | 1013 | 945 | 0 | ||
| SUPERFAMILY | 152 | 583 | 432 | 5.37E-87 | ||
| Gene3D | 200 | 587 | 388 | 1.90E-79 | ||
| Pfam | 247 | 567 | 321 | 2.60E-63 | ||
| CDD | 252 | 518 | 267 | 4.68E-178 | – | |
| SUPERFAMILY | 621 | 857 | 237 | 6.81E-47 | ||
| Pfam | 637 | 850 | 214 | 3.00E-64 | ||
| SMART | 638 | 851 | 214 | 2.90E-52 | ||
| Gene3D | 701 | 852 | 152 | 1.00E-17 | ||
| Pfam | 873 | 1014 | 142 | 2.60E-50 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxoglutarate dehydrogenase (succinyl-transferring) activity | Catalysis of the reaction: 2-oxoglutarate + lipoamide = S-succinyldihydrolipoamide + CO2. | ||
| Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
| Molecular function | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide. | ||
| Molecular function | Thiamine pyrophosphate binding | Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj5g3v2264090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2264090.1, powered by CORGI.
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