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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2266300 |
| Transcript ID | Lj5g3v2266300.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Leucine-rich repeat receptor-like protein kinase [Medicago truncatula] gi|357455263|ref|XP_003597912.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 10 | 22 | 13 | – | – | |
| PANTHER | 22 | 421 | 400 | 3.30E-201 | – | |
| PANTHER | 22 | 421 | 400 | 3.30E-201 | – | |
| Phobius | 23 | 28 | 6 | – | – | |
| Phobius | 29 | 492 | 464 | – | – | |
| Gene3D | 80 | 318 | 239 | 8.60E-44 | ||
| SUPERFAMILY | 81 | 420 | 340 | 1.68E-53 | ||
| SMART | 187 | 211 | 25 | 87 | ||
| ProSiteProfiles | 189 | 211 | 23 | 4.994 | ||
| SMART | 212 | 235 | 24 | 20 | ||
| Pfam | 212 | 250 | 39 | 2.10E-07 | ||
| ProSiteProfiles | 213 | 235 | 23 | 7.974 | ||
| PRINTS | 214 | 227 | 14 | 2.70E-05 | – | |
| PRINTS | 233 | 246 | 14 | 2.70E-05 | – | |
| ProSiteProfiles | 236 | 258 | 23 | 5.094 | ||
| ProSiteProfiles | 259 | 282 | 24 | 5.802 | ||
| Pfam | 260 | 317 | 58 | 1.90E-09 | ||
| SMART | 305 | 330 | 26 | 47 | ||
| Gene3D | 321 | 398 | 78 | 4.00E-21 | ||
| Pfam | 333 | 392 | 60 | 2.40E-08 | ||
| SMART | 355 | 378 | 24 | 6.8 | ||
| ProSiteProfiles | 357 | 379 | 23 | 5.725 | ||
| ProSiteProfiles | 381 | 402 | 22 | 5.171 | ||
| PANTHER | 438 | 460 | 23 | 3.30E-201 | – | |
| PANTHER | 438 | 460 | 23 | 3.30E-201 | – | |
| MobiDBLite | 442 | 468 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2266300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2266300.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.