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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0410600 |
| Transcript ID | Lj6g3v0410600.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nudix hydrolase [Medicago truncatula] gi|357460851|ref|XP_003600707.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| PANTHER | 4 | 221 | 218 | 8.30E-110 | – | |
| PANTHER | 4 | 221 | 218 | 8.30E-110 | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 14 | 24 | 11 | – | – | |
| Phobius | 25 | 29 | 5 | – | – | |
| Phobius | 30 | 242 | 213 | – | – | |
| Gene3D | 53 | 202 | 150 | 4.60E-22 | ||
| SUPERFAMILY | 57 | 202 | 146 | 6.77E-20 | ||
| ProSiteProfiles | 62 | 199 | 138 | 14.077 | ||
| CDD | 65 | 192 | 128 | 1.15E-44 | – | |
| Pfam | 83 | 196 | 114 | 5.90E-10 | ||
| ProSitePatterns | 106 | 127 | 22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of Lj6g3v0410600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0410600.1, powered by CORGI.
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