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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0670020 |
| Transcript ID | Lj6g3v0670020.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA damage-inducible protein 1-like [Cicer arietinum] gi|502129048|ref|XP_004500164.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 399 | 399 | 3.80E-202 | ||
| SUPERFAMILY | 1 | 84 | 84 | 2.23E-18 | ||
| PANTHER | 1 | 399 | 399 | 3.80E-202 | – | |
| Gene3D | 1 | 81 | 81 | 6.30E-19 | – | |
| SMART | 1 | 72 | 72 | 5.00E-12 | ||
| ProSiteProfiles | 1 | 76 | 76 | 17.888 | ||
| Pfam | 3 | 70 | 68 | 1.20E-12 | ||
| PRINTS | 11 | 31 | 21 | 5.20E-05 | ||
| PRINTS | 32 | 52 | 21 | 5.20E-05 | ||
| Coils | 134 | 154 | 21 | – | – | |
| Pfam | 179 | 301 | 123 | 2.60E-53 | ||
| CDD | 186 | 309 | 124 | 3.27E-73 | – | |
| SUPERFAMILY | 186 | 302 | 117 | 7.13E-25 | ||
| MobiDBLite | 335 | 368 | 34 | – | – | |
| SUPERFAMILY | 361 | 399 | 39 | 1.87E-06 | ||
| ProSiteProfiles | 367 | 399 | 33 | 11.149 | ||
| Gene3D | 372 | 399 | 28 | 9.40E-07 | – | |
| Pfam | 373 | 399 | 27 | 9.60E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj6g3v0670020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0670020.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.