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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0963660 |
| Transcript ID | Lj6g3v0963660.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter G family member 23-like [Glycine max] gi|356577612|ref|XP_003556918.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 366 | 366 | – | – | |
| PANTHER | 11 | 647 | 637 | 0 | – | |
| PANTHER | 11 | 647 | 637 | 0 | – | |
| ProSiteProfiles | 51 | 309 | 259 | 20.462 | ||
| Gene3D | 70 | 296 | 227 | 9.70E-49 | ||
| SUPERFAMILY | 70 | 300 | 231 | 3.40E-42 | ||
| Pfam | 83 | 236 | 154 | 2.90E-25 | ||
| SMART | 92 | 294 | 203 | 1.70E-04 | ||
| ProSitePatterns | 208 | 222 | 15 | – | ||
| Phobius | 367 | 384 | 18 | – | – | |
| Pfam | 375 | 581 | 207 | 5.60E-42 | ||
| Phobius | 385 | 390 | 6 | – | – | |
| TMHMM | 390 | 412 | 23 | – | – | |
| Phobius | 391 | 410 | 20 | – | – | |
| Phobius | 411 | 421 | 11 | – | – | |
| Phobius | 422 | 445 | 24 | – | – | |
| Phobius | 446 | 465 | 20 | – | – | |
| Phobius | 466 | 492 | 27 | – | – | |
| TMHMM | 471 | 493 | 23 | – | – | |
| Phobius | 493 | 497 | 5 | – | – | |
| Phobius | 498 | 522 | 25 | – | – | |
| TMHMM | 503 | 522 | 20 | – | – | |
| Phobius | 523 | 528 | 6 | – | – | |
| Phobius | 529 | 551 | 23 | – | – | |
| TMHMM | 529 | 551 | 23 | – | – | |
| Phobius | 552 | 616 | 65 | – | – | |
| TMHMM | 617 | 639 | 23 | – | – | |
| Phobius | 617 | 638 | 22 | – | – | |
| Phobius | 639 | 647 | 9 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj6g3v0963660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0963660.1, powered by CORGI.
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