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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1078590 |
| Transcript ID | Lj6g3v1078590.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: two-component response regulator ARR12-like [Glycine max] gi|356530639|ref|XP_003533888.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 23 | 157 | 135 | 4.10E-40 | – | |
| SUPERFAMILY | 23 | 145 | 123 | 1.71E-34 | ||
| SMART | 24 | 136 | 113 | 5.50E-29 | ||
| PANTHER | 24 | 392 | 369 | 1.60E-205 | – | |
| PANTHER | 24 | 392 | 369 | 1.60E-205 | – | |
| ProSiteProfiles | 25 | 140 | 116 | 41.433 | ||
| Pfam | 26 | 134 | 109 | 4.70E-23 | ||
| CDD | 27 | 139 | 113 | 5.04E-26 | – | |
| MobiDBLite | 142 | 212 | 71 | – | – | |
| Gene3D | 208 | 268 | 61 | 5.90E-29 | ||
| ProSiteProfiles | 208 | 267 | 60 | 10.941 | ||
| SUPERFAMILY | 209 | 268 | 60 | 6.45E-19 | ||
| TIGRFAM | 211 | 264 | 54 | 3.30E-23 | ||
| Pfam | 213 | 263 | 51 | 6.60E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of Lj6g3v1078590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1078590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.