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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1187400 |
| Transcript ID | Lj6g3v1187400.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356558419|ref|XP_003547504.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 28 | 18 | 4.80E-232 | – | |
| PANTHER | 11 | 28 | 18 | 4.80E-232 | – | |
| PANTHER | 48 | 402 | 355 | 4.80E-232 | – | |
| PANTHER | 48 | 402 | 355 | 4.80E-232 | – | |
| SUPERFAMILY | 57 | 361 | 305 | 1.29E-79 | ||
| Gene3D | 62 | 95 | 34 | 3.90E-05 | ||
| ProSiteProfiles | 82 | 364 | 283 | 37.474 | ||
| Pfam | 86 | 360 | 275 | 3.30E-45 | ||
| CDD | 88 | 363 | 276 | 1.08E-89 | – | |
| Gene3D | 96 | 154 | 59 | 4.90E-22 | – | |
| Gene3D | 155 | 358 | 204 | 7.80E-46 | – | |
| ProSitePatterns | 209 | 221 | 13 | – | ||
| MobiDBLite | 386 | 457 | 72 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1187400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1187400.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.