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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1392550 |
| Transcript ID | Lj6g3v1392550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Polygalacturonase QRT3 [Medicago truncatula] gi|357449209|ref|XP_003594881.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| ProSiteProfiles | 1 | 17 | 17 | 6 | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| PANTHER | 6 | 494 | 489 | 2.80E-296 | – | |
| PANTHER | 6 | 494 | 489 | 2.80E-296 | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 19 | 22 | 4 | – | – | |
| Phobius | 23 | 494 | 472 | – | – | |
| MobiDBLite | 62 | 84 | 23 | – | – | |
| Gene3D | 78 | 325 | 248 | 5.20E-16 | ||
| SUPERFAMILY | 86 | 451 | 366 | 3.31E-19 | ||
| Pfam | 92 | 310 | 219 | 1.30E-08 | ||
| Gene3D | 366 | 452 | 87 | 5.20E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v1392550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1392550.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.