Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR024535

Source: InterPro

Description

IPR024535 is a Pectate lyase superfamily protein.

<p>Proteins containing this domain posses a β-helical structure like pectate lyase, including D-mannuronate C5-epimerases and glycosyl hydrolases.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 17

Transcript Name Description Predicted domains Domain count
Lj0g3v0198719.1
– PREDICTED: probable polygalacturonase-like [Glycine max] gi|356535839|ref|XP_003536450.1|
Domains
16
Lj4g3v2289110.1
– PREDICTED: probable polygalacturonase-like [Glycine max] gi|356519942|ref|XP_003528627.1|
Domains
18
Lj4g3v2989010.1
– PREDICTED: probable polygalacturonase-like isoform X3 [Cicer arietinum] gi|502139201|ref|XP_004503680.1|
Domains
16
Lj6g3v1392550.1
– Polygalacturonase QRT3 [Medicago truncatula] gi|357449209|ref|XP_003594881.1|
Domains
17
Lj6g3v1412750.1
– Polygalacturonase QRT3 [Medicago truncatula] gi|357449209|ref|XP_003594881.1|
Domains
17
LotjaGi2g1v0124100.1
– Pectin lyase superfamily protein; TAIR: AT3G61490.4 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|C6T824|C6T824_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0124100
Domains
16
LotjaGi3g1v0179900.1
– Pectin lyase superfamily protein; TAIR: AT3G48950.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|C6T824|C6T824_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0179900
Domains
16
LotjaGi3g1v0185600.2
– Pectin lyase superfamily protein; TAIR: AT3G61490.4 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|C6T824|C6T824_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0185600
Domains
16
LotjaGi3g1v0185700.1
– Pectin lyase superfamily protein; TAIR: AT3G61490.4 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|C6T824|C6T824_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0185700
Domains
17
LotjaGi3g1v0185700.2
– Pectin lyase superfamily protein; TAIR: AT3G61490.4 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|C6T824|C6T824_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0185700
Domains
16
LotjaGi4g1v0337400.2
– Pectin lyase-like superfamily protein; TAIR: AT3G16850.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|A0A0B2P5F6|A0A0B2P5F6_GLYSO Putative polygalacturonase; Found in the gene: LotjaGi4g1v0337400
Domains
14
LotjaGi4g1v0429500.1
– Pectin lyase-like superfamily protein; TAIR: AT3G61490.4 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|I3SCH0|I3SCH0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429500
Domains
16
LotjaGi4g1v0429500.2
– Pectin lyase-like superfamily protein; TAIR: AT3G61490.4 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|I3SCH0|I3SCH0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429500
Domains
16
LotjaGi5g1v0247900.2
– Pectin lyase-like superfamily protein; TAIR: AT3G16850.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|A0A0R0KR00|A0A0R0KR00_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0247900
Domains
15
LotjaGi5g1v0247900.3
– Pectin lyase-like superfamily protein; TAIR: AT3G16850.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|A0A0R0KR00|A0A0R0KR00_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0247900
Domains
15
LotjaGi5g1v0247900.4
– Pectin lyase-like superfamily protein; TAIR: AT3G16850.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|A7PZL3|PGLR_VITVI Probable polygalacturonase; TrEMBL-Plants: tr|A0A0R0KR00|A0A0R0KR00_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0247900
Domains
17
LotjaGi6g1v0244400.1
– Polygalacturonase QRT3; TAIR: AT4G20050.5 Pectin lyase-like superfamily protein; Swiss-Prot: sp|O49432|QRT3_ARATH Polygalacturonase QRT3; TrEMBL-Plants: tr|I1L157|I1L157_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0244400
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.88