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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1708400 |
| Transcript ID | Lj6g3v1708400.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: C2 and GRAM domain-containing protein At1g03370-like [Glycine max] gi|356532855|ref|XP_003534985.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 667 | 667 | 0 | – | |
| PANTHER | 1 | 667 | 667 | 0 | – | |
| Phobius | 1 | 102 | 102 | – | – | |
| Pfam | 2 | 54 | 53 | 9.10E-10 | ||
| Phobius | 103 | 125 | 23 | – | – | |
| TMHMM | 104 | 126 | 23 | – | – | |
| Phobius | 126 | 144 | 19 | – | – | |
| Phobius | 145 | 165 | 21 | – | – | |
| Phobius | 166 | 669 | 504 | – | – | |
| SUPERFAMILY | 188 | 310 | 123 | 1.79E-22 | ||
| SMART | 189 | 287 | 99 | 2.10E-09 | ||
| Gene3D | 190 | 306 | 117 | 3.40E-19 | ||
| Pfam | 190 | 290 | 101 | 6.80E-14 | ||
| ProSiteProfiles | 190 | 272 | 83 | 12.632 | ||
| CDD | 192 | 290 | 99 | 3.93E-16 | – | |
| SMART | 341 | 407 | 67 | 4.10E-22 | ||
| Pfam | 342 | 447 | 106 | 3.00E-15 | ||
| CDD | 352 | 465 | 114 | 3.42E-63 | – | |
| Pfam | 507 | 648 | 142 | 1.60E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v1708400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1708400.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.