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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0009000 |
| Transcript ID | LotjaGi1g1v0009000.6 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A151S032|A0A151S032_CAJCA Heat shock protein 90; Found in the gene: LotjaGi1g1v0009000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1163635..1168752) extracted from Lotus japonicus Gifu genome v1.2.
TCGGTGGGTGAGAATGAGAATGACACCAAATCCAGATGTTATTCTTCTTCTTCTTCTTCTTCTTCTCTATTAACCTCTGA CAAATCCACTGCTCATCCCAATTGGAAACGGGACAGCATTTTTCTGGGCAAACGATATGAATCCACTGCTGCTGAATCTT CATCTTCTGGGGATTCCCCGTCTGCTCAAAGATTTGAGTACCAAGCAGAGGTATGTATGTATATATGGTTATTTCTCAAC CTGCACTGCATGCCATGATGATATGTGTACTGACCATGATTTTGTGTAATATGCATAGGTTAGCCGTCTCATGGACCTCA TTGTTAACAGTCTATACAGTAACAAGGAGGTGTTTCTCAGGGAACTTATCAGGTATTATACTGTTGCAAATGTTTCATTA GTGGTTGCTTATCTTGTCCTGATTGTTAATGGCGGATAGCCTAGTGTAGCGGCAAGCCCAAAAAACGCTATTGAGCGGTG AATAGTGGAGTAGTGGTGAACCCCAGGGCGGGCTATTAACAAGCCTGCCTGAAACCTTTTTAGAATTATGTTGTTGGATA AAGCATAGAGTTAAGAGTGCTATGTGTCAGTTGAAGGATTTGAAGCTACACAGTTTCAATGCCATTGTTATGGAATTTAT TTAACTACATTCAAACTTATAGCTTAAATTGCCTGTTAAAGACACTTTGATCTTGATAAAATTATTAATTTTTCTAATGA GGCTATTTCGAGAAATAGACTACCTATATCTCTGGTTTTGATTGGATGTTATATATATGCATTGTTGTTCAAACTGGCTA TTTATGCTTTTCTTTTCTCGTTACAGTAATGCAAGCGATGCGTTGGACAAACTGCGGTTTTTGAGCGTTACAGAGCCTGA GCTGATGAAGGATGCGGTTGAATTTGATATCCGCATTCATACTGATAAAGATAATGGGATTGTCACTATTACGTAAGATA AAAAGCTTTTGATTTTGTGATTTGGATTTTTATTTTAAAATTCGGCTGGTAACTCGATTTTTGTTTTATGCAGCGATACA GGCATTGGTATGACTAAGCAAGAATTGATTGATTGTCTTGGAACTATTGCTCAAAGTGGAACTGCAAAGTTTTTGAAAGC TTTAAAGGTTCTGCCTCTTCAAAATGATGCTTCGGGATTATATTGTCTTCATTTCATTTTTCAGCTATGTATTTATGTGC TGACAAGGTGTATCATTTAATAGGATAGCAAAGATGCTGGTGGTGACAACAACTTAATTGGTCAATTTGGTGTAGGATTT TATTCTGCTTTTCTGGTTGCTGATCGGGTATGCATTTGTGTTCTAGTAAAAAGTTGATCTATATATATTTTTATTTTAAA TATGGTAGTTATATCTTTTCTTTGTTGCTTGAAGGTGGTTGTCTCAACAAAGAGTCCAAAATCTGATAAACAATATGTTT GGGAAGGAGAGGCAAATGCTAGTTCATATATCATATCTGAGGAAACCGATCCTGAGAAGCTGGTTCCTAGAGGAACTCGC CTTACACTATATCTTAAGGTATGTTGATAATCTCCATGTTTGGTCTTCAATTCATTTAGTTTCTTCATTCAGAAGCTTAC AAATGCGTGTGCATTTTACCCACTGCTAACTTCCAGAGGGACGACAAAGGGTTTGCGCATCCAGAGCGGATTCAAAAGCT TGTGAAAAACTACTCACAATTTGTCTCATTCCCGATATACACTTGGCAGGAAAAGGGATTCACCAAAGAAGTATGGCTAA TGATTCAGATGTTTTCATTTTTATGATGCTATATTTGTATTGTTCGCTCGAAGTTATTTAACAACCCTCCCCCCCCCCCC CCCCAAATCCTATGGAAATTAATTTGGGATCTTTCCAGGTGGAGGTTGATGAGGATCCGGCTGAAGCCAAAACGGATGAA CAAGATGAGAAGACTGAGGTAGCGTTCTGATTGTTCTGCATATATATACACTGTATTGAGTATTGATGAGTGTGAATGTG TGATTGTTTAGCTACCACTTTTACTTACATATTAATGAGTTTGACATGTGTTTGTTACAGAAGAAGAAGAAAACTAAAAC TGTTGTGGAGAAGTATTGGGATTGGGAGCTCACAAATGAGACCCAACCTATTTGGGTGAGTTTTATGATTTCCTATTTCA TGGTTTGTCCTGAACTCAGAATTTTATTTATTGAATGAAGATTTAGACATTACTCTATCTGCACAGCTTCGTAATCCTAA AGAAGTCACTAAGGAGGAGTACAATGAGTTTTACAAGAATACTTTCAATGAATACCTGGAGCCATTGGCATCATCACACT TTACCACAGAGGTAACATTTTTTATTGTCTCAAAATGCTTCTTGTTCTGTTGCATGTTGTTGGATGTTGATATTTACTGT TTGCTACTAGACAAATAGTTTGATAGCCTCAAATTTCCGCTCAAGACCTAATTTGATCGCTAATGTTTTGGTTTTGGTAT TGCAGGGTGAGGTAGAATTTAGGTCTGTACTTTATGTTCCTGCCTTCGCTCCTTCAGGGAAGGATGATATAATCAATCCC AAGACCAAAAATATCAGACTTTATGTGAAAAGAGTTTTCATTTCAGATGACTTTGATGGAGAACTGGTATAAGCACTTTG CTCTTTTGATCTTGAGTATTTGGATGGTGTTCTCACAGTTTATCCTGTGCTAATGTATTATTTGTTTGAACAGTTCCCCA GATACTTAAGTTTCGTTAAAGGTGTGGTTGACTCAAATGACCTTCCACTCAACGTGTCACGTGAAATACTTCAAGAGAGC CGCATAGTAAGTAGATAGGGCACACATCCACTTAATTTTATACCTGGAATTTTCTTTGGTGATACATGTATAAAATTCCT TCCGAGTTTCAACTTGATAAAAAAAATTCTATGTGGTGCTTGAAGGTGCGGATTATGAGGAAACGCTTGGTTAGAAAGGC TTTTGACATGATTCTGGGGATATCCATGAGTGAGAACAGAGAGGTAAGTTCTAATTCAGATAAATTGTAGTTGTACAGTT TGCTTTTTTGATTTTGTTAAGTTAGAAGGGACTGGATAAATTATTGTGGCTTAATCTTTGATAGTTTAACATATATACCT CTTGCTCAGTTGTTTTATGTATCTTTTATAACTGCTTTTATAGAAAGAACTGCATGTTTCATGATAGCATTTACCAGCTG CCTTCATCTGTTTGCAGGACTATGAGAAATTCTGGGATAACTTTGGCAAACACTTAAAATTGGGTTGCATTGAAGACCGT GAGAATCACAAACGACTTGCTCCATTGCTTCGGTTTTTCTCGAACCAAAGTGAGGAAGACCTGATCAGCTTGGATGAATA TGTTGATTGCATGCAACCTGATCAAAAGGATATTTATTACATTGCTGCTGACAGCGTGTCTAGTGCTAAGAACACACCTT TCTTGGAGAAACTTGCGGAGAAAAAACTTGAAGTATAAGCTTATCTTTATTAATGATTACAACTTTATCTATTGACTAAT TTATTTTTGTTAATTTATATATGTTGGTGCTTTTTAATGTAATTTTCAGGTCTTGTTTTTGGTGGATCCAATAGACGAGG TTGCCATTCAAAACCTTAAATCATACAAGGAAAAGAATTTTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTTTGCTT ATTTATTTTTTATTCTTCCTTTTGATGATTTTTGGACTTATACTACATTAGACACACATTTGTCTAAATCAAGGGCATTA GCATTTCATTGATCAAATAGTTGTAGTCTCTCTTGAGTTTTGACAGCTATGAAGTTCATGGTCTGGGTCTTCTTTACTCT TCGAACATGTTTGACTTGGTTTATTGTTTCTGAAGGTGATAAGAACGAGGAAAGGGAGAAGGAAGTGAAGCAGGAATTCG CCCAAACATGTGACTGGATCAAAAAACGTTTGGGAGATAAAGTCGCAAGTGTGCAAATTTCAAACAGACTTAGTTCTTCA CCTTGTGTTCTGGTGTCAGGAAAATTTGGGTGGTCTGCAAACATGGAAAGGTGGGTCTTCCGTCCTCTTAGATATTAAAT GATGTATTTCGTAAATTTAATCAACATTTTGTTTTATGTAATAAATTTGCTTCACAGGCTAATGAAGGCACAAAGTATGG GTGATGCCTCCAGCATGGATTTTATGAGAAGCAGAAGGGTGTTTGAGATCAACCCTGACCACCCTATTATCAGGAACTTG GATGTACGATAAGTGAAGAAATGCACTCTCTTGTATTTGTCATGAGTAATAGATCTAATATAGTCAATTGCAAATTGGAA TAATGTTAATGTAATTTAATTGGTGATTTTCAGGCTGCATGCAAAACAAATCCTGACGATCAAGAGGCCGAGAGAGCTAT TGATCTTTTATATGATGCAGCATTGGTTTCCAGTGGTTATACGGTAAGCTCATGGCTTGATATTGTTGTATGAAAAGTTC AATATTAGACATAGTGATACTGAGTTGCATCTTGCATATTGTGCTAAATATTTTATAGCATAGAAGGAATTGGTGCAAGA ACTTCCGTGTGCTACCTTGTCGTTTTTAGCTTTGTTTAAACTGAAGTGCGCTCCAAACTTGTTAGGAACATAATATAAAA ACATTTGTTTCTCCTCATCACATAGCTTAGGCTTTTGTGATAATTAATGACAGTATTAGAATCTTTGTGACCTAGTTATC TCAAGTTTGATACTTGGGGTTTCCATTATTATACTAAAAAAGTTGAATTTTTGCACAAGCTAGGTTGGACTGTGCATGTT TCAAGCTCAATGGGCTCTTGCATGATTGACTTGTTGAAAACATAATATAATCATCATTCATGTGTCTTCATCCAGCAACT AAAGCTTTTCAGATAGTTTCGTTCATGTCAAAATTTGCATCTTCTGACTTAATTTGTTGGTGTGCAGCCTGATAATCCAG CACAGCTTGGAGGAAAGATATACGAAATGATGAGCATGGCTCTCAGTGGTAGATGGTCAGCTTCTGGTCAGTTTCAGTCC ACTGTAACCCAGCCCCCTGTCCCAGAATTTGTAGAAGCTGAGGTGGTTGAACCCACTGAGGCTGATGGTCAGAAGTGA
CDS sequence (LotjaGi1g1v0009000.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCTCATTGTTAACAGTCTATACAGTAACAAGGAGGTGTTTCTCAGGGAACTTATCAGTAATGCAAGCGATGCGTT GGACAAACTGCGGTTTTTGAGCGTTACAGAGCCTGAGCTGATGAAGGATGCGGTTGAATTTGATATCCGCATTCATACTG ATAAAGATAATGGGATTGTCACTATTACCGATACAGGCATTGGTATGACTAAGCAAGAATTGATTGATTGTCTTGGAACT ATTGCTCAAAGTGGAACTGCAAAGTTTTTGAAAGCTTTAAAGGATAGCAAAGATGCTGGTGGTGACAACAACTTAATTGG TCAATTTGGTGTAGGATTTTATTCTGCTTTTCTGGTTGCTGATCGGGTGGTTGTCTCAACAAAGAGTCCAAAATCTGATA AACAATATGTTTGGGAAGGAGAGGCAAATGCTAGTTCATATATCATATCTGAGGAAACCGATCCTGAGAAGCTGGTTCCT AGAGGAACTCGCCTTACACTATATCTTAAGGTGTGCATTTTACCCACTGCTAACTTCCAGAGGGACGACAAAGGGTTTGC GCATCCAGAGCGGATTCAAAAGCTTGTGAAAAACTACTCACAATTTGTCTCATTCCCGATATACACTTGGCAGGAAAAGG GATTCACCAAAGAAGTGGAGGTTGATGAGGATCCGGCTGAAGCCAAAACGGATGAACAAGATGAGAAGACTGAGAAGAAG AAGAAAACTAAAACTGTTGTGGAGAAGTATTGGGATTGGGAGCTCACAAATGAGACCCAACCTATTTGGCTTCGTAATCC TAAAGAAGTCACTAAGGAGGAGTACAATGAGTTTTACAAGAATACTTTCAATGAATACCTGGAGCCATTGGCATCATCAC ACTTTACCACAGAGGGTGAGGTAGAATTTAGGTCTGTACTTTATGTTCCTGCCTTCGCTCCTTCAGGGAAGGATGATATA ATCAATCCCAAGACCAAAAATATCAGACTTTATGTGAAAAGAGTTTTCATTTCAGATGACTTTGATGGAGAACTGTTCCC CAGATACTTAAGTTTCGTTAAAGGTGTGGTTGACTCAAATGACCTTCCACTCAACGTGTCACGTGAAATACTTCAAGAGA GCCGCATAGTGCGGATTATGAGGAAACGCTTGGTTAGAAAGGCTTTTGACATGATTCTGGGGATATCCATGAGTGAGAAC AGAGAGGACTATGAGAAATTCTGGGATAACTTTGGCAAACACTTAAAATTGGGTTGCATTGAAGACCGTGAGAATCACAA ACGACTTGCTCCATTGCTTCGGTTTTTCTCGAACCAAAGTGAGGAAGACCTGATCAGCTTGGATGAATATGTTGATTGCA TGCAACCTGATCAAAAGGATATTTATTACATTGCTGCTGACAGCGTGTCTAGTGCTAAGAACACACCTTTCTTGGAGAAA CTTGCGGAGAAAAAACTTGAAGTCTTGTTTTTGGTGGATCCAATAGACGAGGTTGCCATTCAAAACCTTAAATCATACAA GGAAAAGAATTTTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTGATAAGAACGAGGAAAGGGAGAAGGAAGTGAAGC AGGAATTCGCCCAAACATGTGACTGGATCAAAAAACGTTTGGGAGATAAAGTCGCAAGTGTGCAAATTTCAAACAGACTT AGTTCTTCACCTTGTGTTCTGGTGTCAGGAAAATTTGGGTGGTCTGCAAACATGGAAAGGCTAATGAAGGCACAAAGTAT GGGTGATGCCTCCAGCATGGATTTTATGAGAAGCAGAAGGGTGTTTGAGATCAACCCTGACCACCCTATTATCAGGAACT TGGATGCTGCATGCAAAACAAATCCTGACGATCAAGAGGCCGAGAGAGCTATTGATCTTTTATATGATGCAGCATTGGTT TCCAGTGGTTATACGCCTGATAATCCAGCACAGCTTGGAGGAAAGATATACGAAATGATGAGCATGGCTCTCAGTGGTAG ATGGTCAGCTTCTGGTCAGTTTCAGTCCACTGTAACCCAGCCCCCTGTCCCAGAATTTGTAGAAGCTGAGGTGGTTGAAC CCACTGAGGCTGATGGTCAGAAGTGA
Protein sequence (LotjaGi1g1v0009000.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPELMKDAVEFDIRIHTDKDNGIVTITDTGIGMTKQELIDCLGT IAQSGTAKFLKALKDSKDAGGDNNLIGQFGVGFYSAFLVADRVVVSTKSPKSDKQYVWEGEANASSYIISEETDPEKLVP RGTRLTLYLKVCILPTANFQRDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGFTKEVEVDEDPAEAKTDEQDEKTEKK KKTKTVVEKYWDWELTNETQPIWLRNPKEVTKEEYNEFYKNTFNEYLEPLASSHFTTEGEVEFRSVLYVPAFAPSGKDDI INPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSEN REDYEKFWDNFGKHLKLGCIEDRENHKRLAPLLRFFSNQSEEDLISLDEYVDCMQPDQKDIYYIAADSVSSAKNTPFLEK LAEKKLEVLFLVDPIDEVAIQNLKSYKEKNFVDISKEDLDLGDKNEEREKEVKQEFAQTCDWIKKRLGDKVASVQISNRL SSSPCVLVSGKFGWSANMERLMKAQSMGDASSMDFMRSRRVFEINPDHPIIRNLDAACKTNPDDQEAERAIDLLYDAALV SSGYTPDNPAQLGGKIYEMMSMALSGRWSASGQFQSTVTQPPVPEFVEAEVVEPTEADGQK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 694 | 694 | 0.0 | ||
| PANTHER | 1 | 694 | 694 | 0.0 | – | |
| SUPERFAMILY | 1 | 213 | 213 | 1.23E-53 | ||
| CDD | 1 | 203 | 203 | 7.7252E-94 | – | |
| Gene3D | 1 | 211 | 211 | 6.1E-86 | ||
| PIRSF | 1 | 696 | 696 | 2.0E-228 | ||
| Hamap | 1 | 661 | 661 | 24.545 | ||
| ProSitePatterns | 9 | 18 | 10 | - | ||
| PRINTS | 10 | 32 | 23 | 1.0E-49 | ||
| Pfam | 11 | 170 | 160 | 6.9E-12 | ||
| PRINTS | 59 | 76 | 18 | 1.0E-49 | ||
| PRINTS | 77 | 94 | 18 | 1.0E-49 | ||
| PRINTS | 106 | 128 | 23 | 1.0E-49 | ||
| Pfam | 186 | 667 | 482 | 6.3E-191 | ||
| PRINTS | 189 | 207 | 19 | 1.0E-49 | ||
| Gene3D | 212 | 249 | 38 | 6.1E-86 | – | |
| MobiDBLite | 219 | 239 | 21 | - | – | |
| Gene3D | 257 | 429 | 173 | 3.1E-68 | – | |
| SUPERFAMILY | 259 | 517 | 259 | 1.97E-87 | ||
| Gene3D | 430 | 516 | 87 | 2.6E-32 | – | |
| Gene3D | 517 | 664 | 148 | 5.3E-52 | ||
| SUPERFAMILY | 540 | 660 | 121 | 5.75E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi1g1v0009000.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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