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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0054800 |
| Transcript ID | LotjaGi1g1v0054800.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0054800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7765058..7769898) extracted from Lotus japonicus Gifu genome v1.2.
TGGTACTACAACATGTTGCTAACTTTTGTATATTCATTGCTAAGCAGGGTGACTTTGGTCTTTTCAGCCTTCATGATTGG AATCCAATGACACTCGTAGCTTCATTGAAGTTTCCTTGATAAAGACTGCATTTAACTAGCTCTTTGCAGACTTTTGCTAC CACTATCCACACTTGGCTTCAGATCTCATCCAAGCAAAACCAGTCCCCGATATTGTTTCCTTTTCAACTTTTGCATTTCT GAAAATGGCTGAGGCTTTACTTGGAGCTGTGTTTGAGAAATTGCTCTCCCTAGCTCAGAATGAATTTGCAACCATGTCTG GAATCCAGGGAAAGGCTAAGAAGCTATCAAACACTCTTGAACTGATCAAGGCTGTTGTTGAAGATGCTGAGGAGAAACAG ATAACAAACAAACCTATAAAGGTTTGGCTGCAGCAGCTCAAAGATGCTGTGTACATCCTAGATGATATCCTTGATGAATG TTCCATAGAATCACTTCGACTTAAAGGATTGTCCTCTTTAAAACCGAAGAGCATCAAATTTCGCTATGAGATTGGCAACA AGCTGAAAGAGATTTCTAGGAGATTTGATGAGATTGCTGACCAGAAGAACAAGTATGTTCTGCAAGAGGTTGTCAGGGAA AGGTCAACTGATGTAGCTGAATGGCGCCAAACCAGCTCGATAATTCCCCAAGCTAAACTATATGGAAGAGAAGATGATAA GGAGAAGATTGTGAAGTTTCTTCTCAGCCAAGCACGCGAGTATGACTTCCTCTCCATCTATCCTATTGTCGGCTTAGGAG GCATGGGAAAAACAACACTTGCTCAAATGGTCTACAATGATGATCAGGTAACAAGCAATTTCAACATCAAAGTTTGGATT TGTGTTTCTGAAAATTTCTCTGTCCAGAGGATTTTGTGCTCCATCATAGAATCTATTACAAAAGCAAAACATGATTGCTT GAATTTAGATGTAACAGAAAGAAAGGTGCAAGAATTGTTGCAAGGTAAAAGATATTTTCTAGTTTTGGATGACGTGTGGA GGAAAAATGAAGAAATGAAATTTGGTTTAACCCAAGACAAATGGAATAAGCTGAAATGTGTGTTGTCATGTGCATCCAAA GGAGCTTCTATTTTAGTATCCACTCGTGATATGAAGGTTGCAGCAATTATGGGAACGTGCCAAGCTCATCATTTGTGCGG TCTCTCAGAGGATGAATGTTGGATGCTCTTCAAACAATATGCATTTGGAACTGAAAAAGAAGAGCGTGCAGAGCTGGTAC CTATTGGAAAAGAGATAGTAAAGAAGTGCGGAGGATCACCTCTTGCAGCACAAGCACTAGGAGGTCTCTTGTTCTCAAGG TCTGAGGAAAAGGAATGGCTTGAAGTTATGGAAAGTGGGCTTTGGAATTTAGAAGGTGAAAATTCTATTTTGGCTGCCTT GAGATTGAGCTACTTTCATTTAACGCCAACATTAAGGCAGTGTTTTGCATTTTGTGCCATATTTCCCAAAGATACAGAAA TCATGAAGGAAGATTTGATACATCTTTGGATGGCTAATGGGTTTATTTCATCTAGGGCAAACTTGGAGGTTGAAGATGTT GGCAATATGATTTGGAATGAATTGTATCAAAAATCATTCTTTCAAGATATGAAGTTGGTTGATTATTCAGATGTTATTCA TTTCAAGATGCATGATCTTGTCCATGATCTTGCTCTTTCAATAATGGGGCAAGAGTGCATGGTTTTGGGAAACACAAACA TGACAGATTTGTCAACAAGCACCCACCATGTTAGCTTTGACTCTGGTATGGATGTATTGTCACTCCACAAAAGTGCCTTG AAGAAAGTTGAATCCTTGAGAACATTTTACCAGTTAAAAGTCTCCAACAGCGTTTCTGGTTGCATCCCAATACACTGCAG CACTCTTCGGGTATTACGCACAAGTTCTTTTAATTTATCACCACTCAAGAATTTAATTCATTTGAGGTATTTGGAACTTT TCCGCCTTGAGATGGAAACCTTGCCCGACTCAATTTATAGCTTGCAGAAATTGGAAATCTTGAAATTGAGATCTTTGACA AAACTTGTTTGTCTACCTAAAGGCTTGACCTGCTTACAGGATCTTAGACATCTTGTCATTGAAGATTGTTATTCATTGTC TTGTATGTTCCCTAACATTGGGAAATTATCCCGTCTGAGAACGTTAAGTAAGTACATTGTCAGTTCAGAGATTGGGCATA GCCTGGCAGAATTACATGACTTAAAACTCAGAGGAAATTTGCACATTGAAGGACTAGAAAATGTTGGCAGTTTATCCGAA GCTCAAGAGGCCAACTTGATGGGTAAAAAAGACATCCACAAATTACAGTTGATATGGGACAAGGAGGTCCACTCAAAGTC ATATGCTACTAATCCGGAGCTAGTACTTAATGCTCTTCAACCTCACTCAAATCTCAAGAATTTGAAAATAGAATACTCTG CAGGATTACAATTACCGACCTGGATGGAAATGCTCACCAATTTAGTTTCTCTTGATCTTTATGGATGCGAGATGTGTGTG CGGCTTCCCTCACTTGGTAAACTACCATATCTAAGAAGAATTAAAATAAGTGAAATGAATGATGTGCAGTACATGGATGA TGACGAATCTTATGATGGTGCGGAGGTGAAAGCTTTCCCGTCATTAGAAGAACTCTCACTATCAGGATGCTCAAAGTTAG AGCGGTTGTTGAAAGTGGAAAGAGGAGAGAATTTCCCCTGTCTTTCTAATTTGATAATTGAGAATTGCCCTAAACTTGAG TTGCCAAGCTGCTGCATTCCGTCACTCAAAAGGCTCAATCTATTTGATTATACGAATGAGATACTGAGGTCCCTCTCAGG TTTCAATGGCCTTACCTCCCTTCGGCTTTACGCTGGCGATGTAGACCTGACATCCTTCCCGGTGGGAACATTGACTTGTC TTCAGACTCTGGGGATATCTAGTTCCGAGGTATTGAAGGAATTACCAAATGAACTCTTCAAGAACCTCAACAATTTGGAC CATCTGCAAATCGATTATTGTAGAAAGCTGGAGTCTTTACCAGAGCAAGGGTGGGAAGGTCTCCGCTCCCTTCGAACTCT GGAGATTTCAGGATGTGGTGAATTGAAATCCTTGCGGGATGGTGTTCGACACCTCACTTCACTCCAGCTTTTGACCATCC GTTATTGTAGCAAGCTGGAGTCTTTACCAGAGCAAGGGTGGGAAGGTCTCCGCTCCCTTCGAACTCTGCAGATTTGGGAT TGTGGTGAATTGAAATCCTTGCCGGATGGTGTTCGACACCTCACTTCACTAGAGGTTTTGAAAATTTACGACTGCCCAGC ATTAGCCGAGAGGTGTAAAGAGGGAACAGGGGAGGATTGGGACAAGATAGCGCACGTTCCCAAAGTACAAATTTTCGTTG GCACTTCAAGTCTTCAACAGATGTGAAAGTAATCATGGATGGTTTTTCAGTTCCTGGAATTAGCCGAATGGTGTCCAACA CCTCACTTCACTCCAGCTTTTGAGAATTCAGGACTGCCCAACATTAGCTGAGAGGTGTAAGGAGGGAACAGAGGTGGATT CGGACAAGATAGCGCACGTTCCCAAAGTTGAATTCTGCAACGCGTAATTTTGCCTAATGGGGGAGAACTTGAACAACAAT TTGGGTACTCTGCTATTTCTGATTCTATTTTTGGTTAATACATATCAGATGTCTTTGATCTTCCTTTTGGAGACTGGATT CCCTGACCAACTCTCAATCGAGGTGTGTGATAAATATTACAATCCTCTATTATAATTATTTGTTTTTTATTGTTTACAAT TTTTGACTTTGTGTGTGGGTTTGATGAATATGGTATGGCCTGTTACAATCTTTTTGCAGTATTTATGTGAACTTGAATTA TTTTGATTGATGATGTTTGTTGGACCTGCAAATTTTTGAGGTATTGTAGGTTAAGTAGTGTAGGAAACTTTGATGATTTG TGTGAGTGTGTTCTTTATTCATGCTTTATGTGTCGTGTCATGTTAATTCATGATGCTTAAAACATTTATCTGAAGAGCAA AATTACAATTTGAATTGCTTTGCTTGCTATATGGTAGTGTATGTTGTTTGTGAAGTTGGTAAGATTAGATTGAAAATTGA TGATGTATATTGATCTGTCATAACTCATTGACTTGTTGATGTATATTTGAACTTTCTGAATATTCTACTGGTTCAAATGT GTGGCAAATTTTCTATATGAATACATTTTTGCACAAGTTTAGGAATTTATTTGTGTATCACTTACTAAGGATGATGTTAG TGATTAACTAGCTTGTGTATATTGTGACCATATCTCCTGCTTTGCTTCAGTGCTCAAAAGAACCCTTCAAATGGAGAGGC AGCCAACCCAGGGAGAGAAGCTTTCGGCCATAAAAGCAAACTGTCAAGTTGAGCTTTCTCTAGATGAATGTGTGATGATT CTCAGTCATAAGAGAGAATTCCACAGGCTCCCTTGAAGACCTTATAGATATTGCTTCTAAGTATGAAGATGATGAATCCA CAGTTCCTCGCTGAAACACCAGATTCTAATTCCATGCACCACCATTCAGGCACAGATGATAGTTTAAAAGATAAATTATT TACCATGTTCCTTTTAATATTTTGGTTGTATTGATTTCACCATTTGGTTCCTCACTGAATGTGATTAGTGGATGTTTGGA AATACAATATATTTTTCACATTGGGGTGAGATTGTGAGAACTTAATAGTTGACTGACTCTAACATAAATCTGTCTCTGAT CTCTCTGCTCATGCTGTCTCTTTTGGGAAAATACCACATGC
CDS sequence (LotjaGi1g1v0054800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGGCTTTACTTGGAGCTGTGTTTGAGAAATTGCTCTCCCTAGCTCAGAATGAATTTGCAACCATGTCTGGAAT CCAGGGAAAGGCTAAGAAGCTATCAAACACTCTTGAACTGATCAAGGCTGTTGTTGAAGATGCTGAGGAGAAACAGATAA CAAACAAACCTATAAAGGTTTGGCTGCAGCAGCTCAAAGATGCTGTGTACATCCTAGATGATATCCTTGATGAATGTTCC ATAGAATCACTTCGACTTAAAGGATTGTCCTCTTTAAAACCGAAGAGCATCAAATTTCGCTATGAGATTGGCAACAAGCT GAAAGAGATTTCTAGGAGATTTGATGAGATTGCTGACCAGAAGAACAAGTATGTTCTGCAAGAGGTTGTCAGGGAAAGGT CAACTGATGTAGCTGAATGGCGCCAAACCAGCTCGATAATTCCCCAAGCTAAACTATATGGAAGAGAAGATGATAAGGAG AAGATTGTGAAGTTTCTTCTCAGCCAAGCACGCGAGTATGACTTCCTCTCCATCTATCCTATTGTCGGCTTAGGAGGCAT GGGAAAAACAACACTTGCTCAAATGGTCTACAATGATGATCAGGTAACAAGCAATTTCAACATCAAAGTTTGGATTTGTG TTTCTGAAAATTTCTCTGTCCAGAGGATTTTGTGCTCCATCATAGAATCTATTACAAAAGCAAAACATGATTGCTTGAAT TTAGATGTAACAGAAAGAAAGGTGCAAGAATTGTTGCAAGGTAAAAGATATTTTCTAGTTTTGGATGACGTGTGGAGGAA AAATGAAGAAATGAAATTTGGTTTAACCCAAGACAAATGGAATAAGCTGAAATGTGTGTTGTCATGTGCATCCAAAGGAG CTTCTATTTTAGTATCCACTCGTGATATGAAGGTTGCAGCAATTATGGGAACGTGCCAAGCTCATCATTTGTGCGGTCTC TCAGAGGATGAATGTTGGATGCTCTTCAAACAATATGCATTTGGAACTGAAAAAGAAGAGCGTGCAGAGCTGGTACCTAT TGGAAAAGAGATAGTAAAGAAGTGCGGAGGATCACCTCTTGCAGCACAAGCACTAGGAGGTCTCTTGTTCTCAAGGTCTG AGGAAAAGGAATGGCTTGAAGTTATGGAAAGTGGGCTTTGGAATTTAGAAGGTGAAAATTCTATTTTGGCTGCCTTGAGA TTGAGCTACTTTCATTTAACGCCAACATTAAGGCAGTGTTTTGCATTTTGTGCCATATTTCCCAAAGATACAGAAATCAT GAAGGAAGATTTGATACATCTTTGGATGGCTAATGGGTTTATTTCATCTAGGGCAAACTTGGAGGTTGAAGATGTTGGCA ATATGATTTGGAATGAATTGTATCAAAAATCATTCTTTCAAGATATGAAGTTGGTTGATTATTCAGATGTTATTCATTTC AAGATGCATGATCTTGTCCATGATCTTGCTCTTTCAATAATGGGGCAAGAGTGCATGGTTTTGGGAAACACAAACATGAC AGATTTGTCAACAAGCACCCACCATGTTAGCTTTGACTCTGGTATGGATGTATTGTCACTCCACAAAAGTGCCTTGAAGA AAGTTGAATCCTTGAGAACATTTTACCAGTTAAAAGTCTCCAACAGCGTTTCTGGTTGCATCCCAATACACTGCAGCACT CTTCGGGTATTACGCACAAGTTCTTTTAATTTATCACCACTCAAGAATTTAATTCATTTGAGGTATTTGGAACTTTTCCG CCTTGAGATGGAAACCTTGCCCGACTCAATTTATAGCTTGCAGAAATTGGAAATCTTGAAATTGAGATCTTTGACAAAAC TTGTTTGTCTACCTAAAGGCTTGACCTGCTTACAGGATCTTAGACATCTTGTCATTGAAGATTGTTATTCATTGTCTTGT ATGTTCCCTAACATTGGGAAATTATCCCGTCTGAGAACGTTAAGTAAGTACATTGTCAGTTCAGAGATTGGGCATAGCCT GGCAGAATTACATGACTTAAAACTCAGAGGAAATTTGCACATTGAAGGACTAGAAAATGTTGGCAGTTTATCCGAAGCTC AAGAGGCCAACTTGATGGGTAAAAAAGACATCCACAAATTACAGTTGATATGGGACAAGGAGGTCCACTCAAAGTCATAT GCTACTAATCCGGAGCTAGTACTTAATGCTCTTCAACCTCACTCAAATCTCAAGAATTTGAAAATAGAATACTCTGCAGG ATTACAATTACCGACCTGGATGGAAATGCTCACCAATTTAGTTTCTCTTGATCTTTATGGATGCGAGATGTGTGTGCGGC TTCCCTCACTTGGTAAACTACCATATCTAAGAAGAATTAAAATAAGTGAAATGAATGATGTGCAGTACATGGATGATGAC GAATCTTATGATGGTGCGGAGGTGAAAGCTTTCCCGTCATTAGAAGAACTCTCACTATCAGGATGCTCAAAGTTAGAGCG GTTGTTGAAAGTGGAAAGAGGAGAGAATTTCCCCTGTCTTTCTAATTTGATAATTGAGAATTGCCCTAAACTTGAGTTGC CAAGCTGCTGCATTCCGTCACTCAAAAGGCTCAATCTATTTGATTATACGAATGAGATACTGAGGTCCCTCTCAGGTTTC AATGGCCTTACCTCCCTTCGGCTTTACGCTGGCGATGTAGACCTGACATCCTTCCCGGTGGGAACATTGACTTGTCTTCA GACTCTGGGGATATCTAGTTCCGAGGTATTGAAGGAATTACCAAATGAACTCTTCAAGAACCTCAACAATTTGGACCATC TGCAAATCGATTATTGTAGAAAGCTGGAGTCTTTACCAGAGCAAGGGTGGGAAGGTCTCCGCTCCCTTCGAACTCTGGAG ATTTCAGGATGTGGTGAATTGAAATCCTTGCGGGATGGTGTTCGACACCTCACTTCACTCCAGCTTTTGACCATCCGTTA TTGTAGCAAGCTGGAGTCTTTACCAGAGCAAGGGTGGGAAGGTCTCCGCTCCCTTCGAACTCTGCAGATTTGGGATTGTG GTGAATTGAAATCCTTGCCGGATGGTGTTCGACACCTCACTTCACTAGAGGTTTTGAAAATTTACGACTGCCCAGCATTA GCCGAGAGGTGTAAAGAGGGAACAGGGGAGGATTGGGACAAGATAGCGCACGTTCCCAAAGTACAAATTTTCGTTGGCAC TTCAAGTCTTCAACAGATGTGA
Protein sequence (LotjaGi1g1v0054800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEALLGAVFEKLLSLAQNEFATMSGIQGKAKKLSNTLELIKAVVEDAEEKQITNKPIKVWLQQLKDAVYILDDILDECS IESLRLKGLSSLKPKSIKFRYEIGNKLKEISRRFDEIADQKNKYVLQEVVRERSTDVAEWRQTSSIIPQAKLYGREDDKE KIVKFLLSQAREYDFLSIYPIVGLGGMGKTTLAQMVYNDDQVTSNFNIKVWICVSENFSVQRILCSIIESITKAKHDCLN LDVTERKVQELLQGKRYFLVLDDVWRKNEEMKFGLTQDKWNKLKCVLSCASKGASILVSTRDMKVAAIMGTCQAHHLCGL SEDECWMLFKQYAFGTEKEERAELVPIGKEIVKKCGGSPLAAQALGGLLFSRSEEKEWLEVMESGLWNLEGENSILAALR LSYFHLTPTLRQCFAFCAIFPKDTEIMKEDLIHLWMANGFISSRANLEVEDVGNMIWNELYQKSFFQDMKLVDYSDVIHF KMHDLVHDLALSIMGQECMVLGNTNMTDLSTSTHHVSFDSGMDVLSLHKSALKKVESLRTFYQLKVSNSVSGCIPIHCST LRVLRTSSFNLSPLKNLIHLRYLELFRLEMETLPDSIYSLQKLEILKLRSLTKLVCLPKGLTCLQDLRHLVIEDCYSLSC MFPNIGKLSRLRTLSKYIVSSEIGHSLAELHDLKLRGNLHIEGLENVGSLSEAQEANLMGKKDIHKLQLIWDKEVHSKSY ATNPELVLNALQPHSNLKNLKIEYSAGLQLPTWMEMLTNLVSLDLYGCEMCVRLPSLGKLPYLRRIKISEMNDVQYMDDD ESYDGAEVKAFPSLEELSLSGCSKLERLLKVERGENFPCLSNLIIENCPKLELPSCCIPSLKRLNLFDYTNEILRSLSGF NGLTSLRLYAGDVDLTSFPVGTLTCLQTLGISSSEVLKELPNELFKNLNNLDHLQIDYCRKLESLPEQGWEGLRSLRTLE ISGCGELKSLRDGVRHLTSLQLLTIRYCSKLESLPEQGWEGLRSLRTLQIWDCGELKSLPDGVRHLTSLEVLKIYDCPAL AERCKEGTGEDWDKIAHVPKVQIFVGTSSLQQM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 119 | 118 | 2.80243E-15 | ||
| Pfam | 6 | 101 | 96 | 1.4E-24 | ||
| PANTHER | 24 | 805 | 782 | 1.4E-176 | – | |
| PANTHER | 24 | 805 | 782 | 1.4E-176 | – | |
| Coils | 31 | 51 | 21 | - | – | |
| Gene3D | 135 | 314 | 180 | 9.6E-35 | – | |
| SUPERFAMILY | 139 | 417 | 279 | 2.07E-65 | ||
| Pfam | 155 | 383 | 229 | 1.9E-51 | ||
| PRINTS | 178 | 193 | 16 | 5.8E-18 | – | |
| PRINTS | 251 | 265 | 15 | 5.8E-18 | – | |
| PRINTS | 355 | 369 | 15 | 5.8E-18 | – | |
| SUPERFAMILY | 481 | 887 | 407 | 9.18E-29 | – | |
| Gene3D | 523 | 863 | 341 | 3.2E-29 | ||
| SUPERFAMILY | 810 | 1059 | 250 | 3.15E-28 | – | |
| Gene3D | 864 | 1048 | 185 | 6.7E-33 | ||
| Pfam | 906 | 964 | 59 | 6.6E-8 | ||
| PRINTS | 951 | 967 | 17 | 5.8E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0054800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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