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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0079200 |
| Transcript ID | LotjaGi1g1v0079200.2 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|G7KGX5|G7KGX5_MEDTR Auxin influx transporter; Found in the gene: LotjaGi1g1v0079200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11419314..11425670) extracted from Lotus japonicus Gifu genome v1.2.
GAGGCGATTGAGCATGGCGAAAGAGAGGAAGAGAATGAAGGTGGTGGTTCAGGGCTGAAGAACTTTCTCTGGCATGGTGG CTCTGTTTATGATGCCTGGTTCAGCTGTGCTTCAAATCAGGTAGTGAGATATGGGGTTTGTGAATTGTGAGTGCTGGTCT AATCATTGGAAGTGAGATTCTGTGACCCTTTTTTGGTGTGTGTGAGGGAATTTGATTCGTTTTTGGGTTTGTGCTGTGCA GGTTGCACAGGTTCTGTTAACACTGCCATACTCTTTCTCTCAACTTGGAATGCTTTCAGGAATCATTTTCCAAATCTTCT ATGGCTTGCTTGGTAGCTGGACTGCTTATTTGATTAGTATTCTGTATATTGAGTACAGAACCAGAAAAGAGAAAGAGAAT GTTAGCTTCAAAAACCATGTCATTCAGGTTGGTTGCTTACAACATATTTGAATCAGCTTTTTTTCCTCAATCAATTCTGA ACTCCGACTTAATTGATTCTGGCCTCAGAAAGAAACCCGGAAAAAGAAAAAATGAAAAGAATTTTTGAAAAAGTTGATAG ATTGATAGCATGTTTGTGACATATTATCTTCCATCATAATCATTTCTGAAACAGCTACTCGAAGAAAGCTATTCCCCGCA GAATTGATATTAACTTCAGAATCAATTGTAGAAGAGTTTTCAAACATTCTCTAAGATTAATGGTTTTTAGTTCATTTTGT GCAGTGGTTTGAAGTGTTGGAAGGTTTACTGGGTCCATACTGGAAGGCCATTGGATTGGCCTTCAACTGCACTTTTCTCC TCTTTGGATCTGTTATCCAGCTTATAGCTTGTGCAAGGTTTGAACTGAACTGAAATTCTTTTGATTATAGCCTGTATCTA TTTAGATACTTGAAAGACAGTGAGATTTGTTCACTTTTTTATGTATCGGCTTATTTTTCTCCGGCTTAATCCAGTTTTTG GTCCCTACCCTTTGTCATAAATATGGCTTTAGTCCCTCGCCGGAGCAAAGGTGGTGATTGGTCCCCAATTTTTTGCAAAA TAGTTGCCTTTGATCCTTCCGGCCGGTTGGGTCAACGCCGGAGCTCCGCCAGCTGACGAGCCACGTCAATTAATGAAGTC CAGGTGGCTTTTTTTCATTTAAATTCTAAAAAAAATATAATTAAAACCCTTAATTAAATCCTTCATTTAATTAAAAAAAA TCATTGTTCATCTTCTGGATTCATCCACACATCTCTCATCATCATCATCTTTCACCATCATCAACATCCTCCCCTCTTCG TTCAACCCCCCCCCCCTCTCCCCCTGGGTTTCGATCTGCCTCAGCTTGGTGGTGTTTCTAGGTTCGTCGTCGTTCTTTTT TCTTTCATATCTGTAGTGTGGGTATGGTCTCGGTGGGTTGGGGTTATGGGTTTTGGGGGTGGGAATTTCGATGGCCGTGG TGGGTGGGGATTATGGGTGTGGTGGATATGGGTTGCGGTGGGTGGAGAAAAGGGGGCCAGATCTAGAGGAGGAGGAAGAA GATGAAAGGGAAGCTAGGGTTTAAAGTGTGCTTCTTGAGGCCTTGAATTCATATTGCATTATTTTCTGTAATTGCTGCAG ACTGAGGCGGAAGTTTGCTGCAGAAATTGGGTTCTTTTGGTTTTTGATTGCTGTCATGTGTTTGGTGCCTTGTTGCGAGC CTACTGTTGGTTTGTTTACTTTGGGGGTTGGTTTAATGGTGCTATTTGCTAGTTTGTGTTTGGCAGCAACTGTGTCTGCA TTTTATTTTTTCTTGGAATTTTTCTGGTAGAGGAGAAGGAGGAAGAAGAGGCTGGGAATATGGTTAAGATATGTATGGGG TTACTGGGTACAGTTAGGAGAATCTGGATTTTTTGTGTTTTTGAAATATCTGTTTTTTTTTTTGAAACTAGAAAAATCTA GGTTGAAGAAGATGATTAAGAAGATGTTGATAAGAAGATAGATGAGTTTTTTTTTTGAATTAATTAAGAAGGAAGTTAAT TAGTGAGTAATTAGTTGTGTTTTAATTTTATTTTTTTTAAATGAAAAAGAAAAAAAAACCACCTCGACCTCATTAATTGA CGTGGCAAGGCCACATCAGCTGGTGGAGCTCCGGCGTTGACTCAACCGGCCGGAAGGACCAAAGCCAACTATTTTGCAAA AAACTGGGGACCAATCCCCACCTTTGCTCCGGCGAGGGACTAAAGCCATATTTATGACAAAGGATAGGGACCAAAAACTG GATTAAGCCTTTTTCTCCCGAATCAATTTTGGTATCCAGAAGCTACTTACATGAGCTTCTTCGCAAAATTGCTTTTGACT TTTGAATCAATTTTAGAAAGATTTCCAAACATGCAATTAAGAATTTGATTTGGATTTTTGTGGTATGCAGTAACATATAC TACATAAATGATCACTTGGACAAGAGGACTTGGACTTACATATTTGGAGCTTGTTGTGCCACCACAGTGTTCATACCCTC ATTCCATAACTACAGGATTTGGTCTTTCCTTGGCCTTGGCATGACCACATACACAGCTTGGTACTTGACCATTGCAGCTG TTGTTCATGGCCAGGTAACTTAAGCAAACATTACCAAATACCAAGTACAACTTGTGGTCCCGATTTCTTGATCGAGGTCT CTGATACCAGTTGAGTGCAATGTAAATAAACTTCTGGGGGATAACTTTGCAGGTTGAAAATGTGAAACACACGGGCCCAA ACAAATTGGTTTTGTATTTCACAGGCGCCACCAACATCCTCTACACTTTCGGCGGCCACGCCGTTACAGTGTAAGCACCA ATTTTTTTTAATGTTTTAGCTTATTGGGTTAGACAAAACAATCATGATAGTGTTCTTTATTGTCCTGAGACAATGAAACA TCAAAGATAGTAGGAGAAGTTTATTGCACGGCCACTTTCTTCAATTGCAGCTTTTGCCTCCATTCTAATGAGGACCTTGT TGTGAATAAGACAAAACTGTTAAATGTGGCACTTTTGAACACCCATTACACTAGTGTCTTGGCTCACAGTTATACTCTGC CTTTATCAATTAAAAGACTTCAAAGTTCAGACCCCCCACTTGAACACTTGAACTTTATTCTTAGAACGTGAAGCCTCTTC ATATTTTGCTTTTTCCCTAATAAATCATGTTCATGTTTGTAAATCTTTCTACAATTGATTCTGAAGCTAGAATTAAGTAA GTTTCTGTGAGTAGCTTTTAGATTTCAAAATTGATTATGATGAAAGTAAAGTTAATTTAAACATGCTACATGATGTAGAT TTACAATTTGCATCTATAAGATAACTTCATTTGTGATATTTAACTGCACAATGTGTAAATTTGTTAATCCAAACTTAGAA TTGATAGATTGTTGGATGACTATATGTTCTTCAATATTTGTTAAGACTTTTTTGTATGATCTCTCTATGTTGCTTCTAGT ATCACTATCATGGAAGTAGAAAAATAAGTGCGTAGTACTAAATTGTGCTATTCTTTAATTATCTTATTAAGAAATTCTCC ACTTGTTTCTTTTCTAATATGATATCTTGATATCAACTTTCTTGGAGAAATAAAACAATGGATTTATTTACTAGAAACAA GAAAGGGTGCAAATTCAGCTAGAAAACAATTATTACATATTTGGACATATCCCAGAAATGACAGACCCAATTTCACTTTT GGATTTGGAGCATAGTGGTAAGAAAAAAGAAGGAAGTTGATTAAAAGAGCATAGCATAGCACATGGGTGATTTGAAGATA TATGCTGATGTTGCAGTGTACACTAACATATTGCTGGACCATGTTACTATTACAGGGAAATCATGCATGCAATGTGGAAA CCTCAGAAGTTCAAATATATCTATCTTTTTGCCACACTTTTTGTGTTCACCCTTACCCTACCATCTGCTATTGCTGTCTA CTGGGCCTTTGGTGACCAACTCTTGGACCATTCCAATGCCTTCTCTCTTCTACCTCGCAATGGCTGGCGTGATGCTGGTG TCATCTTAATGCTCATTCACCAGGTCTATATACATGTTTCTTTTTTCCTTTCCTTAAAATTGCTCATATACTAGATAAAT AATTATTACTTTAAGAGCACCTTATGAATTGGGATTCCCTACAATCAGGGAATCCTATGGTTCATATGTATAAAGAGACT ATTTTTAAGGTATAATTAACTCTTTAAGTCTGAGCTGTTTGATCAAGATCAGACTGTTAAAGACCCTTGACTACACCGAA TGCAGGATTATCTGACTGCATGGAATCAAGGATCACGACTTTAATTCAAATCCCCTACAATCAGAGAATCCTAAATTCAA TGAAGTCAGGGAACTGCAGTCGTGCAGTCGTCTGATCAAAGATCCTACGGTTCAAGGTCCGAGCCGTCTACTCGGTGAGG ACCCTTACTACAATGATTGTAGTATTCCCTGACTGCAGGGAATCCGAGTCCATAAGACTTTAGACCTAGAGTCCTCAGCA GTCTCATTTTTTAGAAACTACAAAGTGTAGCTTACCGTACTTTGACTGCTTTCGATTTTGTGCTAACATCAACCCAAACA TGCTATATTACAAGTGGGAAAATGAAGAAGTTTTAGAAACTTATGTATTTCTATTTCTATGTGAATATGGCAGTTTATCA CCTTCGGATTTGCTTGTACCCCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATTTTTG AGGGCTCTAGCCAGGTTGCCTGTGGTGGTACCAATATGGTTTTTGGCCATTATTTTCCCATTCTTTGGCCCCATCAACTC TGCTGTGGGGGCTCTTCTGGTTAGCTTCACCGTCTATGTCATCCCTGCCTCCGCCCATATGCTTACTTATAGGTCTGCTT CTGCAAGACAGGTAAATATTGTCCCCATCTTTTGTAAACGAGGATTATATTGTCATTATTGTATATTGTCATTATTGTAT ATATTTACCTTCCTAGTTTAGGTTTCACATCTTATGTTTCAATAAATGAAAATTGCTTCTTTCACACCATAGTTATATAC ATTGTACCCTCACATATTTATTTCTTAAGGTAAAAATGGGATAAAGAAACTAAAGTTTCAATCTCTCCATTGTTCTAAGG GTGGGTGAATGAAAAGTCATAAAATATGATGCTTGTCTCATCCAACTGACTTTGTGTGTGTTTGAATACGAGTTGAGTGC AATGTGAACAAACTTTGTGCCTAATTCATAGGAGTTTCTCATTCACTTTTTGTCTTGAAATGCATGCTAACATTTGTTTG CACTAGTGCCGACAGATATCCAAAAATATTATTAATTGAGTCCATAGTGAATTTCTCTTGTCCATTAATAAGATAAGTTA ATAAGCACTATTGAGGCCTGTTCTAGTCAATGTGGTTTTTTTAATAATATGCTGCTCATGCATTCTATTCCAACCTGTAG CTAGCTTTAGTACTGCAATAAATTAAACTAGGTACTGTGTCTGTGTTTTATGTCCTCCCCAAAACCTAAGACCTTCCAGA GAAAGCTTTCAATGAATAGGGCTAGAATGGGAATCCAGTACTGTCCATTTTTATGAGGTGATCTTAGAAGCATTTGGAAG AGCTTCTTTTTCATCACATACAATTTTGAAACTCATAAGCTACACACAAAAGCTTCTCCTAAAAATTGATTTTGGCTTCA GAATCAATTGTAGAAACACTAAATGAGGTTCTTAAAACTCCTTCTGTGGTGTACATGTGTTTGAGGATATATACAGCTTC ATGATTTAACTTGGAAGTGGCTTCCTATGTCACTGGCAGTACAAGTCCCAGTCCCACCACCAATACTATGCTATGCTAAC CATATGTCCCCTACATTTTAACAATGAGCTGGACCATGGCCAACCGAAACACTCTTAAGTGGCCCTACTTAGTACTCAAG TTAATGTTCCTGTTCTAGCATGTTTCTAACAGTTCCTATTTTCTCAAAATTAATTTTGGCACCCAGAAGCTATTTAGATA AAAAAATTCCCAGCTGACACTGCTTTTATCTCATGTTCATTTTCAGAATGCTGCAGAGAAATTGCCCTTCTTCATCCCAA GCTGGACTGCAATGTTTGTGTTCAATGCATTTGTGGTGGTATGGGTTACTGTAGTAGGCTTTGGATTTGGAGGGTGGGCT AGCATGACAAACTTCATCAAGCAGGTTGACACATTTGGACTGTTTGCCAAGTGCTACCAATGCCCACCAAAACTCTCAGC TTCCAACCATACACTGCACCACTGAAAAATCATGTTCTTTTGTCTCCTCTTGTGTTGTCTTAGGTGTATTTTCTCTATCT TTTTTGCTTAATCTCCATACAGATGCATTATTGTTAA
CDS sequence (LotjaGi1g1v0079200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGCTCTGTTTATGATGCCTGGTTCAGTTGCACAGGTTCTGTTAACACTGCCATACTCTTTCTCTCAACTTGGAAT GCTTTCAGGAATCATTTTCCAAATCTTCTATGGCTTGCTTGGTAGCTGGACTGCTTATTTGATTAGTATTCTGTATATTG AGTACAGAACCAGAAAAGAGAAAGAGAATGTTAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTA CTGGGTCCATACTGGAAGGCCATTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGC TTGTGCAAGTAACATATACTACATAAATGATCACTTGGACAAGAGGACTTGGACTTACATATTTGGAGCTTGTTGTGCCA CCACAGTGTTCATACCCTCATTCCATAACTACAGGATTTGGTCTTTCCTTGGCCTTGGCATGACCACATACACAGCTTGG TACTTGACCATTGCAGCTGTTGTTCATGGCCAGGTTGAAAATGTGAAACACACGGGCCCAAACAAATTGGTTTTGTATTT CACAGGCGCCACCAACATCCTCTACACTTTCGGCGGCCACGCCGTTACAGTGGAAATCATGCATGCAATGTGGAAACCTC AGAAGTTCAAATATATCTATCTTTTTGCCACACTTTTTGTGTTCACCCTTACCCTACCATCTGCTATTGCTGTCTACTGG GCCTTTGGTGACCAACTCTTGGACCATTCCAATGCCTTCTCTCTTCTACCTCGCAATGGCTGGCGTGATGCTGGTGTCAT CTTAATGCTCATTCACCAGTTTATCACCTTCGGATTTGCTTGTACCCCATTGTATTTTGTGTGGGAGAAAGTGATAGGAA TGCATGACACAAAGAGCATATTTTTGAGGGCTCTAGCCAGGTTGCCTGTGGTGGTACCAATATGGTTTTTGGCCATTATT TTCCCATTCTTTGGCCCCATCAACTCTGCTGTGGGGGCTCTTCTGGTTAGCTTCACCGTCTATGTCATCCCTGCCTCCGC CCATATGCTTACTTATAGGTCTGCTTCTGCAAGACAGAATGCTGCAGAGAAATTGCCCTTCTTCATCCCAAGCTGGACTG CAATGTTTGTGTTCAATGCATTTGTGGTGGTATGGGTTACTGTAGTAGGCTTTGGATTTGGAGGGTGGGCTAGCATGACA AACTTCATCAAGCAGGTTGACACATTTGGACTGTTTGCCAAGTGCTACCAATGCCCACCAAAACTCTCAGCTTCCAACCA TACACTGCACCACTGA
Protein sequence (LotjaGi1g1v0079200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVALFMMPGSVAQVLLTLPYSFSQLGMLSGIIFQIFYGLLGSWTAYLISILYIEYRTRKEKENVSFKNHVIQWFEVLEGL LGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAW YLTIAAVVHGQVENVKHTGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLFVFTLTLPSAIAVYW AFGDQLLDHSNAFSLLPRNGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIFLRALARLPVVVPIWFLAII FPFFGPINSAVGALLVSFTVYVIPASAHMLTYRSASARQNAAEKLPFFIPSWTAMFVFNAFVVVWVTVVGFGFGGWASMT NFIKQVDTFGLFAKCYQCPPKLSASNHTLHH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| Pfam | 7 | 388 | 382 | 5.4E-75 | ||
| Phobius | 10 | 18 | 9 | - | – | |
| PANTHER | 10 | 416 | 407 | 8.8E-238 | – | |
| PANTHER | 10 | 416 | 407 | 8.8E-238 | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 32 | 9 | - | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| Phobius | 33 | 53 | 21 | - | – | |
| Phobius | 54 | 89 | 36 | - | – | |
| Phobius | 90 | 112 | 23 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 113 | 123 | 11 | - | – | |
| TMHMM | 124 | 141 | 18 | - | – | |
| Phobius | 124 | 142 | 19 | - | – | |
| Phobius | 143 | 148 | 6 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 149 | 172 | 24 | - | – | |
| Phobius | 173 | 183 | 11 | - | – | |
| TMHMM | 183 | 205 | 23 | - | – | |
| Phobius | 184 | 206 | 23 | - | – | |
| Phobius | 207 | 217 | 11 | - | – | |
| Phobius | 218 | 242 | 25 | - | – | |
| TMHMM | 218 | 240 | 23 | - | – | |
| Phobius | 243 | 263 | 21 | - | – | |
| Phobius | 264 | 288 | 25 | - | – | |
| TMHMM | 266 | 288 | 23 | - | – | |
| Phobius | 289 | 299 | 11 | - | – | |
| Phobius | 300 | 324 | 25 | - | – | |
| TMHMM | 308 | 325 | 18 | - | – | |
| Phobius | 325 | 329 | 5 | - | – | |
| Phobius | 330 | 351 | 22 | - | – | |
| TMHMM | 330 | 352 | 23 | - | – | |
| Phobius | 352 | 371 | 20 | - | – | |
| TMHMM | 365 | 387 | 23 | - | – | |
| Phobius | 372 | 396 | 25 | - | – | |
| Phobius | 397 | 431 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0079200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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