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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0089300 |
| Transcript ID | LotjaGi1g1v0089300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | XH/XS domain protein; TAIR: AT3G48670.1 XH/XS domain-containing protein; Swiss-Prot: sp|Q8VZ79|IDN2_ARATH Protein INVOLVED IN DE NOVO 2; TrEMBL-Plants: tr|K7M5B9|K7M5B9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0089300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:13023017..13031570) extracted from Lotus japonicus Gifu genome v1.2.
TGACTTTTTTTTTATCTGTTTCTATTTCTCAAACTCAAACAACCTGCGAAGCTTGCAGCAGCAAATGGTAGTTGCTTCAT GGCACACTCCATGACACAAAAGCCCTACTGAGTAGCCTGATCCTCAGTCCTCACAGTACCCGAAAGCCATTGAAGGTTTC CAATTTGTTCAAGGTGAAGAAGAAAAACCCTTCATTCCTTATTTTCCCTATTTCGGCAATTTTTTTTATTTTTTCAAACT CTCCATTTCACATTGATAATTTAGAACCCACTGTTGAATTTCTTACCAGTTGAATTACCATGCATGCATTCTTATTGGGA ATTTCAGATCTATGCTGTGGTTCATTCATCATCATTGTAGCTTTTTTTATTTGGTTTACAGAAGCATAGCCATGGTGTAG AATTAACAAAATTATTTATCTCAATGCTTGCTTTAGCTGATTCTATTTACCTGAATCACCATGTTAGTGACAATTTGGAG TTTAGAACAATTAGTTACAGAAGCTTCCGTTTTTTATCAGTGTTGAATTTTATGACTCCATGCAGGCTGTTTAAACATTA GATTTAGATGTTGTTAATAAGAAATTATGTTTCTGTTTCTTGACATTGGTTCTAGGTTGTATGTGTTCATGTATTATCCC TTCTAAAATATTCAATTACATAGTAGAAGCGTGGACAATACACAGTAACACAGGTTCATCTACCATGTTCTGAAATTCAT TTATTTTTTTATTACAAGAATTGGGGGCGGGATGGAACTCTAGACTACTTAGTATAGAGGTTCTGATACTATGTCAAGAA CCAATTATCCCAAAAGCTTTAAGCTGTCGGGTAAATGACACATGAATGATTATATTTCTAACAACAATGATATTTAATTG ATGTAATCTGCAAAGGAACACTGCAACTGCCAGTACTAACACCAAATTTTGTCTTTCAGGTGCCATAAATATTAAGCCTA GGAGAAGTCCTAATGGCTCAGTTCTCTAACCAGGACACTGATATAAGGAGTACATCTCAATTAAGTTGGTGGTATGTGGT TAAATCTTACGAAGAACTTAGAAAGGGGGTTCACAAGGTGAAAACCTCATATGAGACTTTCAGTTGTCCATTCTGCCCTG GGAGAAAACAGGATTATAAGTATGTGGAACTCCTTAATCATGCTTCTGGGGTGGGTCGGAGTAGTTCAGACAAGAGAAGT GCTGAAGAGAAGGGTAATCATCTAGCTTTAGTGAAATATATGGAGAAGGACCTTATGAGTATGGGTGGCCCATCAAAACC TGTAGATAAAGGTACTGGAATGAATATAACAAACTTTCTGTTTGATTTTTGTTTTCCCTATAACTGAATATGCAGAAAAT CCCCAGTTCACAAAGATATTTAATGGAAAAATGGAGGTATATGATAAAGCAACATGACAACAGTCAGTGCTTACACTAAA TTTTGTCCTTCAGGCACAACATCTGTAATGGCTCACTTCTTTAACGAGGATACTGACGCAAATGCATCTCAAATAAGTTG GTGGTATGTAGATGCATCTTACGAAGAGCTCAAAAATGGAAGTCGAAATGTGAAAACATCAGATGAGACTTTAACCTGTC CGTACTGCCCTAAGAGGAAGCAGGACTATATGTACAGGGAACTCCTAGAACATGCTTATATGGTGGGACGGAGTAGTTCC GAAAAGAGAAGTGCTAGAGAGAGGGCTAATCATCTGGCTTTAGTGAAGTATTTGGAAAAGGATCTCATGAGTATGGATGG GCCTTCAAAAGTTGTTGATAAAGGTGATCGTCCTGTTTATGAACACTATAACTGAATTTCAGTTAAGTTAATGTTTTTCC AAGTTTCTGATGGAATAATGAAGATATTTTTTAAGGAAGCAAAGTAACAGTCAGATCTAACCCTAATTTTTGTCTCTCAG GTACCAAACTAATAAGCCCAGAACAATCTTCTATGGCTTACTGCTCTAAGAAGGATACTAATATTAGTGCATCTCAAATA CATTGGTCGTATGTGGATATATTTTATAAAGAACTCAAGAAGGGAAGTTGCAATGTCAGAACCTCAGATGAGACTTTCAT ATGCCCATACTGCCCTAAAAAGATAAATCGGGATTATGTGTACAGAGAACTCCTTGAACATGCTTCCGGGGTGGGTCAAA GTAGTTCAGAAAAGAGAAGTGTCAAAGAGAGAGCAACTCATCTAGCTTTAGTGAAATATTTGAAGATGGATCTTATGAAT GTGGATGGTCAATCAGAACCTTCAAATGAAGGTAATCCCCTTGTTCAAGAAGCAATTATTCTGAAATATCTGTTCAAGTT TTCCTAATTACTGAATATGCTGAGATTGGCTAATTCAATTCATGAGGTTGTTTAATGAAAGTAATTTGTAAAGGTCACAT TTTATCAAAATAACAAATAAGTAAATTAGCATGACAGCAACTAGTTCTAATACCAATTTTTGCCTTTCAGGAACCGAAAT GTTAAGCCCAGAAGAAACTGCGATGGCTAGCTGCTCTGACAAATATACTGATATAAGCTCATCTCAAACAAGTGCGGGGT ACGTCAACCAATCATATGAGCAACTAAAAAATGGGAGTCACAATGTGAAAACCTCAGACGAGACTTTCGCATGCCCTTAC TGCCCTAATAAAAAGAGAAAACGGGATTATGTGTTACGGGAAATCCTTGAACATGCATATGGGGTGGGTCGGAGTGACTC ACCAAATAGAAGTGCCATTGAAAAGGCCAATCATCTGGCTTTAGTGAAATATTTGAAAAATGATCTTATGAATGGGGGCG GTCCATCAAAACCTATGAATGAAGGTGATCCTCGTTAGTGAAACAATTATAAAAAAGTTGTTTTAACTTTTTTTTCTGTT ACTAAATAGCCAAAATTAGCCAATTCACAAAGATTTTTTATGGGATGAAAGTAATCTTTTGTAAACATCATTACGAAAAC TAATTTTGTCTTTCAGGCACCACAATATTGAACCCTGGAGAAACTGTAATGAGTCAGAACTCTCACAATGACACTAATAA AAGGGAATCTCAAATAAGCTTGTTGTATATAGATCGATCCTATGAAGAACTCAAAAAGGGAAGTTACAAGGTGAAAGTCT CGGAAGATACTTTCATGTGTCCGTACTGCCCTAATAGAAAACAGGATTATGTGTACAGGGAAATCCTTGCACATGCTTCT GGGGTGGGTCAGAGTAGCAAACAAAAGAGAAGTGTCGTGGAAAAGGCCAATCATCTTGCTTTAATGAAGTATTTGGAAAA TGATCTTATGAATGTGGACCATCCATCAAAACCTGCAAATGTAGGTCGTCCTCCTGTCTATTCAGATAAGCATTTAGTGT GGCCATGGACTGGGATTGTGGTTAATGTCCCTACTAGACAGACAGAAGATGGACATTTTTCTGGGGAAAGTGGTTCCAAG CTAAGGGACGAATTCCGATGCAGGGGTTTTAATCCACGTAGAGTCCGCACTCTTTGGGATTCCTGGGGCCACTCTGGAGG TGCAATCGTGGAATTCAATAAAAATTGGTCGGGCTTAGATAATGCATTGGCATTTGAAAGAGCATACGAATCAGATCATC ATGGGAAAAATGACTGGTTTGCTAATACCACGCAGAAGTCTGGTCTTTATGCATGGATTGCTCGAGCTGATGACTACTAT ATGAACAATATAATTGGGGAACAACTGCAGAAGATGGGGGATGTCATAACAATACCTGAACTTATGGAAGAAGAAGCTCG AAGGCATGCTAAATTTGTATCCAGTTTGACTAACACTCTTCAGGTCAAGAACAAGAAATTAAAGGAGATGGATGTAGTAT GCAGTGAAATTACAGTTCGCATAGATACTGTAACCGGTGAAATAGACAAGCTCACTCAGACTCACAGTCAAGGTATCTAT TGTTATTGAACAGAAGTTACTTTTTCTCTAATTTAGACATTGAGTCATTGATTGTTACTTTCAGTGTTTCATTTTTCTGA TTTATTTGCCCAGTAGTAGAAGACAAGTTTATGGTGAAATGGAGCCACTAAGTTGTTACACAATTGCCAATGTGGTAGTT TCTAAACCATTGGATTGAACCTGTTTTTAACAAAAAATAAAATGGTAGAATCATGGTCCAGAAACTGTCACCTAGTGTTT GCAACAGCATAGTGGTTCCACCACAGAATTCATCTTTTTAAAAATGATAGTTTGGGATGAGAACTGACACTACAATCAAA ATGGTAAGATAATTCTGAGAATTAGCTCTGGCTACAATGGAAAATTACAGAAGGTAATCCCAGAAAGTGCAAGTAAAATA TCTGAGGAGCGGTTCCTTCTCTGCCCTGTGGTATCAGCCACCCCAAAACTTATTGAATGATGAGTGATGACCTACCTTGC GCAGTACCCTTGATTTCCATCATCTTCATGCCCCTCTTCCTTATTATAACACTTCTCCAATCTTCTTTCAAGTGTATGAT CAGTTAGAGTCTTGCTTAATAAACTCCTACAGACTATTTCCCCATTATTTCCCAGCCTACACTTAGCTAACCTTAATTGG AGGACCATGATGTGAGGACCATCAGTTTACGTATGTTCTGCTAGCTTTTCAAAAATACATTTGCAACAATTGATTGTTTT AAATGAGGCTGAACTATTCAAATGACATTGTTTTATGTCATCATTGGTTGCTTGTATTCAGAGATGAAGAAAATACAGTC AAGTGCAATTCAACATGTTCAGAGTGTTTTAAATGGTCATGAAAGGCTTAAGTTGCAACTGGAATATCAGAAAAGAGAAC TTGAGTTTCGAAGAATCGAACTGCAAAAACGTGAGACACATAATGAAAGTGAAAGAAAAAAGTTGGAAGAAGATATTATG GAGGTAGTGTTCTTATTTTTGTTGCATCTATTCTATCATGCTGTGATTGAGATTCCTATGAAATGAAGGTAGATGGAATT TTTTTTTAAGGGTGATTGGATAGGATTATCAATATATTTAGATGTTTTAGTGACCTCAAGGGAGTTGTTAGCCAAGATAG TGATTTTTCAACTTTTACTTGTCAGGTTGATGATCATCAAATGGTTGGTTGAAAAACATTCTTAGTTTTTGTTAACATTA TGGTAAACATAATGGTTGAAAAACATTCTCAGTTAGAATAGCATGCAATTGAAGGCTAAGCATTTTGTTTATTCTCTGAA AATAAGTGCACTGCATGAGTTGGTATATGTTAATCAATCTTGTATATCTCTTTAGTTATGCGTCTGTTTGCTTCGTCTAG GGGTTTATAATTCTATACTCTCATCTGAGTTAGGATGCTGTTGTATTTTAGAATGGATGCCAAGGAAATTAACCTGAGGT TTTCCTATTTTTTAACATTATTCTTTTCCCCCCCGGACCTTGGTGAGGAATATATAAACCTAAAATTCTGCATTATTTGT TGGTCTGTGTCTTTGTAATCCTTTAACACTAACTATGTGGCTAAGAAGCTTGAAGAATGTTTTGTTTAGAAATGCAGCCA ATGCTGACGTCTATTCTCTTTCTAGACTGCAATGAGAAATAGCTCTCTTGATATGGCTGTTCTGGTGCAACAGAAAGCCG GTGAAAATGTTTTAAAACTGGCTGCAGATCAAAAGGTTTGTGTAACCTATCTATATGCATTGTTATTGTGCAAAGTGTCA CTGTCAGCATGAGAAAAGCAGTTTCTTAATTCTCTTTGACTATTTATTTATCCAGCGGCAAAAAGAACAATTCCATGCTA AAATCATCCAGCTTGAAAAACAACTGGTTGTGAAACAAAAACTTGAATTGGAGATTCAACAGCTAAAAGGAAAATTAAAT GTCATGAAGCACATGGAAGGTGACGGGGACTCTGAAGTTCTGAATATGATGGATGCCTTACATGAAGATTTAAGAGAAAA GGAACTGTCACTCCGAGAGTTGGATGCATTGAACCAAACACTGATCATTAAAGAGCGTAAAAGCAATGATGAGCTACAGG AAGCTCGAAGAGAATTGATAAAGGTAATTTTTCTTAAATGTATCTTCTATTTCCAAAGTGCTGATTTTGTAAAAGCATCT GTTCAATAGGGTCCTGTTTTTGAATTTACTCATAAATTCTTGGTTATGTATGGAGTATGGCCGTTGCATGTTTTAGATGA CGATACTTCTCAATCATTCAAATTTTTATGTGAATTAAATATGATATTGATTTATTGATGATACTGCCTTGCATATTCCA TAGTGCCTGAGAAAAAAACTGAAATATACTGGTGCCTTATGAAGTTTCATTTTTTGTGTAATGATTCATTTTTTAGCCAC ATTTTATATTGTAAACTTTTATTTGTTCAGACTTCAAAGTAAGGTAACAATTTAACTTGAGTAAAATCTAAGCCATGTTG TTTCTCTGAAATCTACTTGGCATGTATTACACAAAAAGAATTGATGTATGTATCATCAGTCTTATAGTTTTGGTCAGTAA TTGTGTTTTTCTAAAACTATGATATTGTGTGGGACAGTCAATGTTCATTCAGTCATTTGTTACATGACTAGTAGCTCATG GAGTTAATGTGTTTAAATTTTCTAAACTTTCTTGGATTTTTATCTGCTGCAGGTCATTAAAGAGATACCTACTCGTGACA ATATTGGTGTCAAGAGAATGGGTGAACTTGACACTAGACCGTTCGTAGAAGCTATGAAGATGAAATATAATGAGGCAGAC GCAGAAGATAGGGCATCAGAACTGTGTTCATTATGGGAAGAGTATCTGAAGGATCCTGACTGGCATCCATTTAAAATTTC CATGATTGAAGGGAAACATCAGGTGTGCCTTTCTTAAGCTTTATAGGTTTTCTGAAGTACGCGTGTTTGATATCAATTTT AAGCCATGAAGAAATTAGGCTCATTCTGTTGTAAGCACTCCATGTTTATGCATGTGGTACTGTTGTGTGACGATAATGAA TATCCTTGATGTCTACGGCCTACTTGGCTTGACATAAGGGTGATGAATAAGGTTAAATTTAATCCATATAACTTGGGTAG CTAAACTAGGTCAGTACTATTAGAAAAATATGTAATTCTTTCACCTTTTGTTTTCTAGAGCACATTATTCTTTATCATTT CACTTTTGGATCTGTTTGTGTTACAGTGTTTTTTACTGATTGATCCCACCCGCCATGAAATCCATAGGTGGACTTTTGAT GACCACAAAATTGGAAGATAATACTGAATGTCATTGCTATATCAACTATCATGATCATGACGTAGATATTATGATGTCAG ACAATTAATTTTAAAACTAACAAGAACGATGCCTATATTTAGCAAAGTCAATTTGGATATATCTATTAGATCTTGTCATA AAGCTGTTGGATCAGAGGTTCTGTTCACTGTGGTTGTTTCAATATTACCAGCTTGTTAAGCTTGTGCTTCTTGTTTGGTA CAATATATTGTCCAACAGTTTTCAGATTCATTGGAATATATTTTCCTGGTGAAACTTATCCGGAAATCATTTCATTTCAG GAAATCATTGATGATGAAGATGAAAAGTTGAGAGGACTGAAAAACGAAATGGGCGAAGGAGTCTACGAAGCGGTTGTGAC AGCTTTGAGAGAGATAAATGAATATAATCCAAGCGGGCGGTATATAACCTCAGAATTATGGAATTATAAAGAGGGAAGGA GAGCAACTTCGAAAGAAGGAGTTCAAGTGTTATTGAAGCAGTGGAAACTATATAAACAAAAAACAGGAATGTTATGAAAG CCTGGGATGTATGTAATTAGAATAAGATACTGCATTTTTCTTTTGAACTGTATAACTAGAAAGAAAGAATTTTTTTCCTG ATAATCAATTCAGTTTCCAATAAGAACTAGGTGCCTACGCCACATCATTTCTCAAAATACTGCTGTTTGATTTTCATTAT TCAGAAAAATGAGGAAATGTGGTTTTTCACCTTGACTATTTAATTACCTTTTCAACTACCATATATGTCATGTAAGGATT ATATTGCTTAAGGGTTGGTGTTGGTTCCAGGAATGTGTTGCTTTCCCCAGAGGAAATTGTGCTGTGGAGTCAAATATGGA ACCAGTCAGAAAATCTTATTTGCTCAGGAATTGACAATGATATAGGTGCAAGCCTCAACCTGCAACATAAATCACTCATG GCTGAATTCTCCACTCTTCAAAATCAAAACCAACATACATTAGAAGTTCTTAATGGGCTTGAAAAGTTAATGCTGCTTTA ATCCAACTAGCTGTGAGTCCCTCATTGTCATCGTATTGTATTTGTATATCTCTCTTTAAGTTAAATTTAGATCTTGGATT AAAAAACAACACCGATACACATGCAATTTTGCAGGTTGAGATTGCAGGGTGCCACTGAAGAGCACCCTAATACTCATTCA TATCTGATTCCTTTCCATTAGCCAAGTTTAGTCCTCTCTTTATTTAAGGATTCATTGAAATTTGGAAGGTAAACAAAGTT CTTAACAATCATAAACTTCTTTAGCTCTTAAATATTTGGATTTGAATATCTTGTATGAGCTTCTTTGTACCTGC
CDS sequence (LotjaGi1g1v0089300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCAGTTCTCTAACCAGGACACTGATATAAGGAGTACATCTCAATTAAGTTGGTGGTATGTGGTTAAATCTTACGA AGAACTTAGAAAGGGGGTTCACAAGGTGAAAACCTCATATGAGACTTTCAGTTGTCCATTCTGCCCTGGGAGAAAACAGG ATTATAAGTATGTGGAACTCCTTAATCATGCTTCTGGGGTGGGTCGGAGTAGTTCAGACAAGAGAAGTGCTGAAGAGAAG GGTAATCATCTAGCTTTAGTGAAATATATGGAGAAGGACCTTATGAGTATGGGTGGCCCATCAAAACCTGTAGATAAAGG CACAACATCTGTAATGGCTCACTTCTTTAACGAGGATACTGACGCAAATGCATCTCAAATAAGTTGGTGGTATGTAGATG CATCTTACGAAGAGCTCAAAAATGGAAGTCGAAATGTGAAAACATCAGATGAGACTTTAACCTGTCCGTACTGCCCTAAG AGGAAGCAGGACTATATGTACAGGGAACTCCTAGAACATGCTTATATGGTGGGACGGAGTAGTTCCGAAAAGAGAAGTGC TAGAGAGAGGGCTAATCATCTGGCTTTAGTGAAGTATTTGGAAAAGGATCTCATGAGTATGGATGGGCCTTCAAAAGTTG TTGATAAAGGTACCAAACTAATAAGCCCAGAACAATCTTCTATGGCTTACTGCTCTAAGAAGGATACTAATATTAGTGCA TCTCAAATACATTGGTCGTATGTGGATATATTTTATAAAGAACTCAAGAAGGGAAGTTGCAATGTCAGAACCTCAGATGA GACTTTCATATGCCCATACTGCCCTAAAAAGATAAATCGGGATTATGTGTACAGAGAACTCCTTGAACATGCTTCCGGGG TGGGTCAAAGTAGTTCAGAAAAGAGAAGTGTCAAAGAGAGAGCAACTCATCTAGCTTTAGTGAAATATTTGAAGATGGAT CTTATGAATGTGGATGGTCAATCAGAACCTTCAAATGAAGGAACCGAAATGTTAAGCCCAGAAGAAACTGCGATGGCTAG CTGCTCTGACAAATATACTGATATAAGCTCATCTCAAACAAGTGCGGGGTACGTCAACCAATCATATGAGCAACTAAAAA ATGGGAGTCACAATGTGAAAACCTCAGACGAGACTTTCGCATGCCCTTACTGCCCTAATAAAAAGAGAAAACGGGATTAT GTGTTACGGGAAATCCTTGAACATGCATATGGGGTGGGTCGGAGTGACTCACCAAATAGAAGTGCCATTGAAAAGGCCAA TCATCTGGCTTTAGTGAAATATTTGAAAAATGATCTTATGAATGGGGGCGGTCCATCAAAACCTATGAATGAAGGCACCA CAATATTGAACCCTGGAGAAACTGTAATGAGTCAGAACTCTCACAATGACACTAATAAAAGGGAATCTCAAATAAGCTTG TTGTATATAGATCGATCCTATGAAGAACTCAAAAAGGGAAGTTACAAGGTGAAAGTCTCGGAAGATACTTTCATGTGTCC GTACTGCCCTAATAGAAAACAGGATTATGTGTACAGGGAAATCCTTGCACATGCTTCTGGGGTGGGTCAGAGTAGCAAAC AAAAGAGAAGTGTCGTGGAAAAGGCCAATCATCTTGCTTTAATGAAGTATTTGGAAAATGATCTTATGAATGTGGACCAT CCATCAAAACCTGCAAATGTAGGTCGTCCTCCTGTCTATTCAGATAAGCATTTAGTGTGGCCATGGACTGGGATTGTGGT TAATGTCCCTACTAGACAGACAGAAGATGGACATTTTTCTGGGGAAAGTGGTTCCAAGCTAAGGGACGAATTCCGATGCA GGGGTTTTAATCCACGTAGAGTCCGCACTCTTTGGGATTCCTGGGGCCACTCTGGAGGTGCAATCGTGGAATTCAATAAA AATTGGTCGGGCTTAGATAATGCATTGGCATTTGAAAGAGCATACGAATCAGATCATCATGGGAAAAATGACTGGTTTGC TAATACCACGCAGAAGTCTGGTCTTTATGCATGGATTGCTCGAGCTGATGACTACTATATGAACAATATAATTGGGGAAC AACTGCAGAAGATGGGGGATGTCATAACAATACCTGAACTTATGGAAGAAGAAGCTCGAAGGCATGCTAAATTTGTATCC AGTTTGACTAACACTCTTCAGGTCAAGAACAAGAAATTAAAGGAGATGGATGTAGTATGCAGTGAAATTACAGTTCGCAT AGATACTGTAACCGGTGAAATAGACAAGCTCACTCAGACTCACAGTCAAGAGATGAAGAAAATACAGTCAAGTGCAATTC AACATGTTCAGAGTGTTTTAAATGGTCATGAAAGGCTTAAGTTGCAACTGGAATATCAGAAAAGAGAACTTGAGTTTCGA AGAATCGAACTGCAAAAACGTGAGACACATAATGAAAGTGAAAGAAAAAAGTTGGAAGAAGATATTATGGAGACTGCAAT GAGAAATAGCTCTCTTGATATGGCTGTTCTGGTGCAACAGAAAGCCGGTGAAAATGTTTTAAAACTGGCTGCAGATCAAA AGCGGCAAAAAGAACAATTCCATGCTAAAATCATCCAGCTTGAAAAACAACTGGTTGTGAAACAAAAACTTGAATTGGAG ATTCAACAGCTAAAAGGAAAATTAAATGTCATGAAGCACATGGAAGGTGACGGGGACTCTGAAGTTCTGAATATGATGGA TGCCTTACATGAAGATTTAAGAGAAAAGGAACTGTCACTCCGAGAGTTGGATGCATTGAACCAAACACTGATCATTAAAG AGCGTAAAAGCAATGATGAGCTACAGGAAGCTCGAAGAGAATTGATAAAGGTCATTAAAGAGATACCTACTCGTGACAAT ATTGGTGTCAAGAGAATGGGTGAACTTGACACTAGACCGTTCGTAGAAGCTATGAAGATGAAATATAATGAGGCAGACGC AGAAGATAGGGCATCAGAACTGTGTTCATTATGGGAAGAGTATCTGAAGGATCCTGACTGGCATCCATTTAAAATTTCCA TGATTGAAGGGAAACATCAGGAAATCATTGATGATGAAGATGAAAAGTTGAGAGGACTGAAAAACGAAATGGGCGAAGGA GTCTACGAAGCGGTTGTGACAGCTTTGAGAGAGATAAATGAATATAATCCAAGCGGGCGGTATATAACCTCAGAATTATG GAATTATAAAGAGGGAAGGAGAGCAACTTCGAAAGAAGGAGTTCAAGTGTTATTGAAGCAGTGGAAACTATATAAACAAA AAACAGGAATGTTATGA
Protein sequence (LotjaGi1g1v0089300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQFSNQDTDIRSTSQLSWWYVVKSYEELRKGVHKVKTSYETFSCPFCPGRKQDYKYVELLNHASGVGRSSSDKRSAEEK GNHLALVKYMEKDLMSMGGPSKPVDKGTTSVMAHFFNEDTDANASQISWWYVDASYEELKNGSRNVKTSDETLTCPYCPK RKQDYMYRELLEHAYMVGRSSSEKRSARERANHLALVKYLEKDLMSMDGPSKVVDKGTKLISPEQSSMAYCSKKDTNISA SQIHWSYVDIFYKELKKGSCNVRTSDETFICPYCPKKINRDYVYRELLEHASGVGQSSSEKRSVKERATHLALVKYLKMD LMNVDGQSEPSNEGTEMLSPEETAMASCSDKYTDISSSQTSAGYVNQSYEQLKNGSHNVKTSDETFACPYCPNKKRKRDY VLREILEHAYGVGRSDSPNRSAIEKANHLALVKYLKNDLMNGGGPSKPMNEGTTILNPGETVMSQNSHNDTNKRESQISL LYIDRSYEELKKGSYKVKVSEDTFMCPYCPNRKQDYVYREILAHASGVGQSSKQKRSVVEKANHLALMKYLENDLMNVDH PSKPANVGRPPVYSDKHLVWPWTGIVVNVPTRQTEDGHFSGESGSKLRDEFRCRGFNPRRVRTLWDSWGHSGGAIVEFNK NWSGLDNALAFERAYESDHHGKNDWFANTTQKSGLYAWIARADDYYMNNIIGEQLQKMGDVITIPELMEEEARRHAKFVS SLTNTLQVKNKKLKEMDVVCSEITVRIDTVTGEIDKLTQTHSQEMKKIQSSAIQHVQSVLNGHERLKLQLEYQKRELEFR RIELQKRETHNESERKKLEEDIMETAMRNSSLDMAVLVQQKAGENVLKLAADQKRQKEQFHAKIIQLEKQLVVKQKLELE IQQLKGKLNVMKHMEGDGDSEVLNMMDALHEDLREKELSLRELDALNQTLIIKERKSNDELQEARRELIKVIKEIPTRDN IGVKRMGELDTRPFVEAMKMKYNEADAEDRASELCSLWEEYLKDPDWHPFKISMIEGKHQEIIDDEDEKLRGLKNEMGEG VYEAVVTALREINEYNPSGRYITSELWNYKEGRRATSKEGVQVLLKQWKLYKQKTGML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 107 | 103 | 0.0 | – | |
| PANTHER | 5 | 107 | 103 | 0.0 | – | |
| Pfam | 45 | 87 | 43 | 9.0E-17 | ||
| PANTHER | 116 | 222 | 107 | 0.0 | – | |
| PANTHER | 116 | 222 | 107 | 0.0 | – | |
| Pfam | 155 | 197 | 43 | 1.0E-13 | ||
| PANTHER | 229 | 335 | 107 | 0.0 | – | |
| PANTHER | 229 | 335 | 107 | 0.0 | – | |
| Pfam | 271 | 314 | 44 | 3.8E-15 | ||
| PANTHER | 347 | 460 | 114 | 0.0 | – | |
| PANTHER | 347 | 460 | 114 | 0.0 | – | |
| Pfam | 388 | 432 | 45 | 1.7E-14 | ||
| PANTHER | 463 | 1094 | 632 | 0.0 | – | |
| PANTHER | 463 | 1094 | 632 | 0.0 | – | |
| Pfam | 506 | 547 | 42 | 3.8E-15 | ||
| Gene3D | 572 | 741 | 170 | 1.7E-63 | ||
| Pfam | 575 | 686 | 112 | 4.8E-36 | ||
| CDD | 578 | 685 | 108 | 2.6876E-39 | ||
| Coils | 850 | 894 | 45 | - | – | |
| Coils | 906 | 954 | 49 | - | – | |
| Pfam | 964 | 1094 | 131 | 1.4E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Gene silencing by RNA | Any process in which RNA molecules inactivate expression of target genes. |
Expression pattern of LotjaGi1g1v0089300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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