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LotjaGi1g1v0091000.3

Overview

Field Value
Gene ID LotjaGi1g1v0091000
Transcript ID LotjaGi1g1v0091000.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT1G07570.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q06548|PBL9_ARATH Probable serine/threonine-protein kinase PBL9; TrEMBL-Plants: tr|I3SV89|I3SV89_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0091000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:13230136..13232845) extracted from Lotus japonicus Gifu genome v1.2.

TCATGAGGTATGTATCAGAATTTAAGCTTGCTTATGTCATTTCTGAAGTGTTTGACCTTTTCTCATGCGATTCCAACAAC CATAAAATGTAGTGCATAACTGGTAGAGAAATTACTGTCACCTGATCCTAGTTTTTCTATTCAAGTATAAGCTGAGTGAA ATTAGTCATTACTCATTAGATTAGAGTGCTTATACATTTTTCTTTTGACATGCACAGGACTGAGTTCCAAGGATGGTTGC AGATCGGAGGATTGCTTGAATGGTGCAAGCAGCAGCAGCAAGGTCTCCATTCCCTCGATGCCTCCAACTCCTCGGACCGA GGGTGAGATCTTGAAGTCCTCCAATATGAAGAGCTTCACCTTTGGTGAGCTTAAAACCTCGACAAGGAACTTTCGTCCCG ATAGTATGGTCGGCGAAGGTGGGTTTGGTTGTGTATATAAGGGCTGGATAGATGAGCAGTCACTTGCCCCAGCTAGACCG GGAACTGGAATGGTCATTGCTGTAAAGAGGCTTAACCAAGAAGGTTTGCAGGGACACAGTGAATGGCTGGTGAGTGTCTT TTGGCAGAGCTTATTTACACTCTGGAACTTTGCTCAAAGCCTGAGAATTTAAGATACAGTTCCACTTTAAAGTTTAGGAA AATGTTAAGTTAGTGCATGTTTGGAAACTCTTCTACAATTAATTTTGAAGGTAGAATCAACTCCGGGATGAAGCTTCTGA GAGTATGTTTTAGATTTCAGGATTGATTCTGATCAAAGAGAAGGTGATCCAAACATGCTATTAGTTTAATGGGATGATTT TGGGAACTTATCCTTTTCTATTAGATGGAACAAATAGTTAATACTTTAGATGATTTGTTATTTTGATGTAACTAATTAGC CTTATGCTATAGACAGAAATCAACTACCTGGGGCAGCTGCATCATCCTAATCTTGTGAGACTGGTTGGTTACTGCGTAGA GGATGACCAACGGCTTTTGGTATATGAATTTTTAACCAAGGGGAGTTTGGACAATCATTTATTTAGGAGTAAGTTATTGA TTTTCCTTCAAATTTTTCTATGGAGTAAGATTAATTCAGTACCTTGAACACCTCTAATTGTCATTTACCTATTCTATTTA TAACAGGGGGTTCTTACTTTCAACCTCTTTCTTGGAGCATCCGCATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCA TATCTTCACAGTGATGAAGCAAAAGTGATATATCGAGACTTCAAAACTTCAAATATATTGCTTGATTCGGTTAGCATATC TATCTCATGGATCTTACAATTTACTAGTCATACATACTGGCCTTTCTAACATCTATTTGTTGATGACAGAATTATCGCGC AAAACTTTCTGATTTTGGCTTGGCAAAGGATGGACCAGTGGGTGATAAGAGCCATGTGTCTACAAGGGTAATGGGCACAT ATGGCTATGCTGCTCCTGAATATATGGCCACAGGTACCAAATTTTGCAGGATGCTTAAGCTTATGATCTCTTTAATTTGT CATAACATACCATATTTCTTTTGCATATGACATAATCCTATCTTCTAAATTATTTTGCATTGACTATATAAATATAATAC ATTACCTTTTACCGGGAAAATGAAACCCTTAACCCTTATGAGTTCTTTTTCAAACCAGAGTGTAGTTTCTTAGCTTCTTT TCTCCCTATATTAGCAAGCCATAGTTATGCACCACTTGACATTTGATCCTACTATAGTATCTTGCATTTTACTGGGTTAG CATTTGGAACAAGAGGTGCTGCCATGTGACTAGGAGGCACTGGTTCAAACTGTTAAATTAACCTCTTGCAAACTCTATGT TTGGCTGCCTGTAGTAGGCCCAAAATCGGTTAGGCTTTTCCCTAGACCCATCACAGCAAGAGTTTTGTTACAGTGAGCTG CCATTTTAGCATTTGGACCCAACAGATTCTATGCCTCCATATTCTTGGATTTTCAATAACATCCACCACCAGTTGACTCA TTTTTATAATAAGACATCATCATTCAATGTAAACTGAACTGTTTTTAGTTTTCACTTGCTCAACAATGCATCTCAAATCC AGAAATGAACTATTAGCATCTTCGAATTAGCTTCTATTTTCTCAGACTCAATTCTAACACACAGAAGCTTCTGTCCATAA TAGAATTCGACTTTAGACTCAATTATAAAATGACTTCTAATCATCCACCAACATGTTCACTTAGCTGGGTGAAGTTAATT CCTAGTTTTCCCTCCTGACCTGTGTTTTTTCCCCATTGTTTTTTTGTGAAGGTCACTTGACCAAAAAGAGTGATGTATAC AGCTTTGGAGTTGTTCTCCTTGAAATCATGTCCGGCAAACGAGCCCTTGACCAGAACAGACCATCCGGGGAGCACAATTT GATTGAGTGGGCAAAACCTTACCTCAGCAACAAGCGCAGGATCTTCCAAGTTATGGATGCTCGAATTGAAGGCCAATACA CATTACGCGAAGCAATGAAGGTAGCTAACCTTGCAATTCAATGCTTGTCTGTGGAACCAAGATTCAGACCGAAAATGGAT GAGGTGGTGAGTGTGTTGGAGGAACTTCAGGGTTCTCATGATGACACAGCTGGAGGAGTGGGAACTTCTAGAGATCAGCG TGCTAAAAGGAATGTTCATAGTGGTCCTAAGCAGCATAGAAGTAAACAAAGTGGAATAACTGTCCAGTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0091000.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCTCCAACTCCTCGGACCGAGGGTGAGATCTTGAAGTCCTCCAATATGAAGAGCTTCACCTTTGGTGAGCTTAAAAC CTCGACAAGGAACTTTCGTCCCGATAGTATGGTCGGCGAAGGTGGGTTTGGTTGTGTATATAAGGGCTGGATAGATGAGC AGTCACTTGCCCCAGCTAGACCGGGAACTGGAATGGTCATTGCTGTAAAGAGGCTTAACCAAGAAGGTTTGCAGGGACAC AGTGAATGGCTGACAGAAATCAACTACCTGGGGCAGCTGCATCATCCTAATCTTGTGAGACTGGTTGGTTACTGCGTAGA GGATGACCAACGGCTTTTGGTATATGAATTTTTAACCAAGGGGAGTTTGGACAATCATTTATTTAGGAGGGGTTCTTACT TTCAACCTCTTTCTTGGAGCATCCGCATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCACAGTGATGAA GCAAAAGTGATATATCGAGACTTCAAAACTTCAAATATATTGCTTGATTCGAATTATCGCGCAAAACTTTCTGATTTTGG CTTGGCAAAGGATGGACCAGTGGGTGATAAGAGCCATGTGTCTACAAGGGTAATGGGCACATATGGCTATGCTGCTCCTG AATATATGGCCACAGGTCACTTGACCAAAAAGAGTGATGTATACAGCTTTGGAGTTGTTCTCCTTGAAATCATGTCCGGC AAACGAGCCCTTGACCAGAACAGACCATCCGGGGAGCACAATTTGATTGAGTGGGCAAAACCTTACCTCAGCAACAAGCG CAGGATCTTCCAAGTTATGGATGCTCGAATTGAAGGCCAATACACATTACGCGAAGCAATGAAGGTAGCTAACCTTGCAA TTCAATGCTTGTCTGTGGAACCAAGATTCAGACCGAAAATGGATGAGGTGGTGAGTGTGTTGGAGGAACTTCAGGGTTCT CATGATGACACAGCTGGAGGAGTGGGAACTTCTAGAGATCAGCGTGCTAAAAGGAATGTTCATAGTGGTCCTAAGCAGCA TAGAAGTAAACAAAGTGGAATAACTGTCCAGTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0091000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPPTPRTEGEILKSSNMKSFTFGELKTSTRNFRPDSMVGEGGFGCVYKGWIDEQSLAPARPGTGMVIAVKRLNQEGLQGH SEWLTEINYLGQLHHPNLVRLVGYCVEDDQRLLVYEFLTKGSLDNHLFRRGSYFQPLSWSIRMKVALDAAKGLAYLHSDE AKVIYRDFKTSNILLDSNYRAKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSG KRALDQNRPSGEHNLIEWAKPYLSNKRRIFQVMDARIEGQYTLREAMKVANLAIQCLSVEPRFRPKMDEVVSVLEELQGS HDDTAGGVGTSRDQRAKRNVHSGPKQHRSKQSGITVQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621:SF115
2 356 355 3.2E-232 –
PANTHER
PTHR45621
2 356 355 3.2E-232 –
Gene3D
G3DSA:3.30.200.20
7 117 111 3.4E-34 –
SUPERFAMILY
SSF56112
11 314 304 1.5E-79
IPR011009
ProSiteProfiles
PS50011
32 317 286 39.156
IPR000719
Pfam
PF07714
36 314 279 9.0E-47
IPR001245
CDD
cd14066
38 317 280 1.66524E-92 –
ProSitePatterns
PS00107
38 70 33 -
IPR017441
Gene3D
G3DSA:1.10.510.10
118 335 218 3.0E-60 –
ProSitePatterns
PS00108
163 175 13 -
IPR008271
MobiDBLite
mobidb-lite
321 357 37 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0091000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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