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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0147000 |
| Transcript ID | LotjaGi1g1v0147000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TPR repeat-containing thioredoxin TTL1; TAIR: AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9MAH1|TTL1_ARATH TPR repeat-containing thioredoxin TTL1; TrEMBL-Plants: tr|G7KAB8|G7KAB8_MEDTR Inactive TPR repeat thioredoxin TTL3-like protein; Found in the gene: LotjaGi1g1v0147000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:25034265..25039254) extracted from Lotus japonicus Gifu genome v1.2.
CGCAGAAAGAGCTAAAGTAGTTTCTTGGAAGCCACTCTACAAGCCAATTAAGTCTATATAAATACACACATATAACATCT TGTACAGGACACGCCTCTTACCTAAAGTGCTTCTTGCTCAAGCCATCCATCACTTTTATCATTTCCCTTTCATAATCTCC CAATCAGAGCTTTTTCTCTATCCAAGCAACAAAATATACAGCTCTGTCACCTGGAGTATAAGTTGTCGCTTTCATACTTC ACAATCACATATCTCCTTTTTCTCACACACACAAACATCTTTAAAAATCAAAACTTCATGGCAGCTAAGGCCAAGAACAA CAACAAGATGGTGAATGAATTGGGTTGTGGTTTCATGGGGAAAATTCTCCAATTCAAAAACCACAGGCTGAGAAACTCAT CTGTTCATTCACTACCCATCAAGGCACACAGTGATGATCATGGCAAAAATGAACTCAAGAAGTTTCCAAATGAAGAACCA AAGGTTCCATTAAGAAGAAGTTTCACCGACACAACACTCACTGAGCCACAAAAACAGAGTACAGAACAGAGACTTTCAAA AAAGAGTCATCAAACACCCTCAACACACCAAAAAACCCATCAAAATAGAAGGAATTCAGATGCTGCAAGAAATTCAACAT CATCCTCAACTGGTAGTTCAACTTCAAACCACACAAAGGTTCAACAAAACCATGACATGAATGATGAAGTGAAGCTACAG AGAGAGCCCACTGCCAATTCCCTGCAACTTGCTAGAATAAGCACAAGTTACCAGAAAGACAATGATGGCAACAAATCCTC ACCCAAAGAGTTTTCTCCTTTGAAACTCACTGGGAACTTGCTTGTGAATCACACCCCAAGAAGAAAGAGTGTAGAATACA CCCCTAAAATTTCATCAGAGCTGAATAAAAGAAGCAATTCAAGCAAAGGTGTGATGATGGGGAATATCATGAGGAAGAAC AGCAATGATCTTGCACAGCTTCTAACTCAAAGGCAGAGCAGAGACCCTGAGGTGTTGAAGTCAACGGGGAATGAAGCATA CAAGAAGGGAAGGTTTGAAGAGGCTCTGGCTTTGTATGATCAAGCAATTGCCCTTGATTCAAATAAAGCAACTTATCATT GCAATAAAAGTGCGGCTTTAATTGGCTTAGGAAGGTTTGAGGAAGCCATTTTTGAGTGTGAGGAATCAATCAGACTAGAG CCTTCATATATCAGAGCCCATAACCGCTTAGCAACAATATACTTCAGGTAATTCGAGCGTGTTCAAAAATCATTCTACAA TTAATTCTAAAATTCTAAAATTCTAAAATTAAAACCAATTATGAAGATAAATTTTTGTGAGTAATTTTTGCGTGTTAGAA TTGAACTAGTTGACATAACATGGTAGTTACATATTATACTTTGGATAGTTTTTATTAGTTTTTTTCTTATGGAATTCCAA ATTTTAATGCAGGCTAGGAGAAGCTGAAAAAGCATTGGACTGCAATAATTCAACATCATCTGGTGATTCTGTGCTCACTT TCCAAGCTCAGGCTCTTCAAAAGCACATGATCAAATGCAATGAAGCTCGGAAATTCCATGAATGGAGAGTTATACTGAAG GAAACACAGTCTGCAATATCCGTAGGTGCTGATTCAGCTCCTCAGGTTAGTTCCATGGTCAAAGATTTTATTTTTCGATA TTTCTTATGTGCAACACAAACGATTTTGCACTTGTACATTTTTTATCTTGGATTCTTATTAAAATCCATATAACACGCTA ATTACGGTGCCAGCTGGCAGAATCCTAAAACTCCAGTTATGACTCATGCTGATTAAAATTGTTTGTGTATATGCTAGATC TATGCTTTGCAAAGTGAAGCATTGCTAAAGCTAGTGAGATATCAAGAGGCGTATTCCATATACGACAAAATTCCGAAATT TTCACTTGATTGGTGTAACAAGATTTTTGGCCTGGCTACTAGTGCCTACCTCTTGATGATAGGCGCACAGGTTTACTTGA CAGCTGGCAGGTTGGTGAAAATGCATTATTTTGATTTGATGTGTTTGAAAAATTCTTCAATCATCATATTTGTAATTTTA TAGCAGAGCAGCCTTGCAGCCTATGTCTCACCAATAAGTTTATGTCATGTTAATTAAAAATACAATAAAAAAACTACCTG AATTGAATTTGATGTTTATAGTTTTGAAAGACCTGTGACTTGACTAGTAAACTGAAAACAGAAAAATATTTGTGAGATAT TTTGAAATGATAGTTTGTAGAAAACTACTTACTATTTTTTTTCAAAACAGTTCCATATCAAAAAGTTTTTCTCCTATGTC ATTCGATTGCCAATGTTCAATGCTGGTACATTTTTTGAGCCTAGTTAGAAATGAACCCAAGTTTAATTGAATTTTGTGGG TTTAATAGGTTCGAGGATGCTTTGACAGCAGCTCAGCAAGCAGCAAGAGTCGACCCAAGCAACAGAGAAGTGAATGCAGT GTTAAGGAGAGCTAGAGCAGTGACATCAGCTAGAATGAGTGGAAATTTACTCTTCAAGGCCTCAAAATTCACGGAAGCTT GTGCGGTGTACAATGAAGGACTAGAACATGATCCCCAGAACTCAGTTTTGCTATGCAACAGAGCAGCATGTCGCTCTAAG CTAGGCCAATATGAGAAAGCAATTGAAGATTGTAATGCAGCACTTATGGTTGTGCCAGGTTATAGCAAAGCAGTGCTAAG AAGGGCAGATTGCAATGCCAAGGTACTCTAATTGCTTCTTTAATATTTAGTATATTAAGTTCTTCTTGCACATACATCTT TATACTTAATAACCCTTTTGTTTTATCATGTAGTTGGAACACTGGGAAGCTGCCATTCAAGACTATGAAATGCTACTAAG AGAGAAGCCAGGGGATGAGGAAGTGGCCAAGGCTTTGTTTGAGGCTCAGCTCCAACTCAAGATGATACGTGGTGAAGATA CTAAGGACTTGAAGTTTGGGTCAAATTTGGTTTTTATTTCAAGTAATGATCGGTTCAGACACTATGTAACTTCACCTGGT AAGGCACACTTTAGCTTCTTCTCTTATACAAAAACAAACAAAGCATTTCAAATACACTAACCAGTGGTGATGGTTATTGA ATAGGGATGGCTGTGGTGCTGTTTAGCAACAAGGCAACCCACAAGCAAGTGTTGCTAGTGTTGGAGCAAACCAGCAAGAG ATTCCCATCAGTTAATTTCCTCAAGGTTGGTTTATCTTGAATCGTTTGGAGTGTGTTTGAAGTAATAGATAGAAGAAAAA AGAAAAATCTAATTATCAAATGCAATTGATAGTGTGATAAAGAAAGACAACTTTGGTCAATATATAAATTCTTTAAATTC AAGTATTCAACATATTTTACCTTGCTTCTAACTTGTAATTGAATTACAATATTTTAGGTGGAGATTGAAGACCACCCCTA CTTAGCAAAATCAGAAGGTGTGACCTCTGTCCCAGCCTTCAAAATATACAAGAACGGATCAAAGGTTAAAGAGATTTCAG GCAACAAGCACGAGTTGTTAGAAAGATCAGTTAAATTGTACAGCAGCTGAGACTGAGATGATTGCACATCTTCAAATGAG GAAATGAGCAAGAAAATTGTTTGATTTTTCAGGAAGAAAACAAAAAAGATGCCCAAAATGATTCCAGATAATTTTTTCTC CTTCATAAATTTGATGACCTTGCTCACAAGGCAGAGGAAACAAGAGAAGAATCATTATATCACTGTAGCAAGTTTATAGA GAAAAGGAATTCCATCATTCCATGTATATTGGTTTGACAAACCTAAACAATACCTTGTATTTTTTTCACTTTTTGAATGT TAAATTTTCTTCAAAGGAGTGTTTTTAGTTTTTACATATCAGTTCATGAATCACATTCTAGAAGTTAAATGACACATGAA TAGAATAGCTTTATATTATATCTCTTAAAGCCCGCTTCAAGCAAGAGTCTATTTTAGCTCGAAACATGAATAGTGCAACA GCCCCCTAACAAATAGTACACTAAGAATCAATCTCTAGACAATTTAATCAAAGTGATTTTGGCACCATATCTCGGATCGA TGAACTCTTCCTGAAGCTTAATTAATCACATAATCAGCATCACTTACATTGCATAGGTTGTACTGGAAAATTACTAGTTC TTCTAAGAGCACTACAAATATCAGGTGTCTAATATAGAAAAGGGTTTAAACAGTAAAGTAAGTTCTAAATACACAGTACT ACCAACTGTTCCAGTTGAAACAGAAAAACAGGCATAATTTCTCTCCATATACATCATTTTGACTTCAGAATTTTCCTAGT TCATTAATCTCAGGTGTCTAATTTTCTACTTTTATGTACTACTCTAGAATCAATACTTTATAAGTTCGATTCGATTAGTC TGCTAAAACATAGTTCATACTGCAGATTTTTCCTAGTTCATCAATCTCAGGTATCTAATCATCCATTTTATGTATTACTC TAGAATCAAAACACTGTTCTATTCCATTAGTCTGCTATAACTCTCTCCTGGAAATTGATCACAGAGATAAACAACAACAA GAGCAATGCGGAAAGAAAGAGCACCAAGAGGAGCAGAACAAGCACCGTAACGGAGCCGCGGAACTTCATCTTCCTGAAGC TCAACCGCTCCTTCAGCAGCTGAATCTTCAGGTCCTGAATCTCGCTCCTCATCACCTGAAACAAACAAACACACAGCGAA TCAAGTAGAGTGTTGATTTCTAGGGTTTCAAATCAAATAGAGTGTTGATTTCAGGATTTGAGAGTTCACAGAGAGAGTGA CCTCTTCTTCTTCTTCTTCTTGTTCGGAGATGGTTCTGGTTCTGCATTGTTCGTCGGAGTTGGTTGTGGATTTCAAGGCG GAGAGTAACAACGCCGCTTTTGCACAGCGGCGCAATGCGGTTGCAGATTTCGCACCATTCTCTTCGTTTTCCATTTCTCT CTCAAGCTCTCTATCGAATAACTGCGTAAC
CDS sequence (LotjaGi1g1v0147000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCTAAGGCCAAGAACAACAACAAGATGGTGAATGAATTGGGTTGTGGTTTCATGGGGAAAATTCTCCAATTCAA AAACCACAGGCTGAGAAACTCATCTGTTCATTCACTACCCATCAAGGCACACAGTGATGATCATGGCAAAAATGAACTCA AGAAGTTTCCAAATGAAGAACCAAAGGTTCCATTAAGAAGAAGTTTCACCGACACAACACTCACTGAGCCACAAAAACAG AGTACAGAACAGAGACTTTCAAAAAAGAGTCATCAAACACCCTCAACACACCAAAAAACCCATCAAAATAGAAGGAATTC AGATGCTGCAAGAAATTCAACATCATCCTCAACTGGTAGTTCAACTTCAAACCACACAAAGGTTCAACAAAACCATGACA TGAATGATGAAGTGAAGCTACAGAGAGAGCCCACTGCCAATTCCCTGCAACTTGCTAGAATAAGCACAAGTTACCAGAAA GACAATGATGGCAACAAATCCTCACCCAAAGAGTTTTCTCCTTTGAAACTCACTGGGAACTTGCTTGTGAATCACACCCC AAGAAGAAAGAGTGTAGAATACACCCCTAAAATTTCATCAGAGCTGAATAAAAGAAGCAATTCAAGCAAAGGTGTGATGA TGGGGAATATCATGAGGAAGAACAGCAATGATCTTGCACAGCTTCTAACTCAAAGGCAGAGCAGAGACCCTGAGGTGTTG AAGTCAACGGGGAATGAAGCATACAAGAAGGGAAGGTTTGAAGAGGCTCTGGCTTTGTATGATCAAGCAATTGCCCTTGA TTCAAATAAAGCAACTTATCATTGCAATAAAAGTGCGGCTTTAATTGGCTTAGGAAGGTTTGAGGAAGCCATTTTTGAGT GTGAGGAATCAATCAGACTAGAGCCTTCATATATCAGAGCCCATAACCGCTTAGCAACAATATACTTCAGGCTAGGAGAA GCTGAAAAAGCATTGGACTGCAATAATTCAACATCATCTGGTGATTCTGTGCTCACTTTCCAAGCTCAGGCTCTTCAAAA GCACATGATCAAATGCAATGAAGCTCGGAAATTCCATGAATGGAGAGTTATACTGAAGGAAACACAGTCTGCAATATCCG TAGGTGCTGATTCAGCTCCTCAGATCTATGCTTTGCAAAGTGAAGCATTGCTAAAGCTAGTGAGATATCAAGAGGCGTAT TCCATATACGACAAAATTCCGAAATTTTCACTTGATTGGTGTAACAAGATTTTTGGCCTGGCTACTAGTGCCTACCTCTT GATGATAGGCGCACAGGTTTACTTGACAGCTGGCAGGTTCGAGGATGCTTTGACAGCAGCTCAGCAAGCAGCAAGAGTCG ACCCAAGCAACAGAGAAGTGAATGCAGTGTTAAGGAGAGCTAGAGCAGTGACATCAGCTAGAATGAGTGGAAATTTACTC TTCAAGGCCTCAAAATTCACGGAAGCTTGTGCGGTGTACAATGAAGGACTAGAACATGATCCCCAGAACTCAGTTTTGCT ATGCAACAGAGCAGCATGTCGCTCTAAGCTAGGCCAATATGAGAAAGCAATTGAAGATTGTAATGCAGCACTTATGGTTG TGCCAGGTTATAGCAAAGCAGTGCTAAGAAGGGCAGATTGCAATGCCAAGTTGGAACACTGGGAAGCTGCCATTCAAGAC TATGAAATGCTACTAAGAGAGAAGCCAGGGGATGAGGAAGTGGCCAAGGCTTTGTTTGAGGCTCAGCTCCAACTCAAGAT GATACGTGGTGAAGATACTAAGGACTTGAAGTTTGGGTCAAATTTGGTTTTTATTTCAAGTAATGATCGGTTCAGACACT ATGTAACTTCACCTGGGATGGCTGTGGTGCTGTTTAGCAACAAGGCAACCCACAAGCAAGTGTTGCTAGTGTTGGAGCAA ACCAGCAAGAGATTCCCATCAGTTAATTTCCTCAAGGTGGAGATTGAAGACCACCCCTACTTAGCAAAATCAGAAGGTGT GACCTCTGTCCCAGCCTTCAAAATATACAAGAACGGATCAAAGGTTAAAGAGATTTCAGGCAACAAGCACGAGTTGTTAG AAAGATCAGTTAAATTGTACAGCAGCTGA
Protein sequence (LotjaGi1g1v0147000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAKAKNNNKMVNELGCGFMGKILQFKNHRLRNSSVHSLPIKAHSDDHGKNELKKFPNEEPKVPLRRSFTDTTLTEPQKQ STEQRLSKKSHQTPSTHQKTHQNRRNSDAARNSTSSSTGSSTSNHTKVQQNHDMNDEVKLQREPTANSLQLARISTSYQK DNDGNKSSPKEFSPLKLTGNLLVNHTPRRKSVEYTPKISSELNKRSNSSKGVMMGNIMRKNSNDLAQLLTQRQSRDPEVL KSTGNEAYKKGRFEEALALYDQAIALDSNKATYHCNKSAALIGLGRFEEAIFECEESIRLEPSYIRAHNRLATIYFRLGE AEKALDCNNSTSSGDSVLTFQAQALQKHMIKCNEARKFHEWRVILKETQSAISVGADSAPQIYALQSEALLKLVRYQEAY SIYDKIPKFSLDWCNKIFGLATSAYLLMIGAQVYLTAGRFEDALTAAQQAARVDPSNREVNAVLRRARAVTSARMSGNLL FKASKFTEACAVYNEGLEHDPQNSVLLCNRAACRSKLGQYEKAIEDCNAALMVVPGYSKAVLRRADCNAKLEHWEAAIQD YEMLLREKPGDEEVAKALFEAQLQLKMIRGEDTKDLKFGSNLVFISSNDRFRHYVTSPGMAVVLFSNKATHKQVLLVLEQ TSKRFPSVNFLKVEIEDHPYLAKSEGVTSVPAFKIYKNGSKVKEISGNKHELLERSVKLYSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 701 | 699 | 0.0 | – | |
| PANTHER | 3 | 701 | 699 | 0.0 | – | |
| MobiDBLite | 38 | 209 | 172 | - | – | |
| MobiDBLite | 41 | 66 | 26 | - | – | |
| MobiDBLite | 68 | 100 | 33 | - | – | |
| MobiDBLite | 107 | 129 | 23 | - | – | |
| MobiDBLite | 141 | 174 | 34 | - | – | |
| Gene3D | 236 | 589 | 354 | 1.5E-78 | ||
| SUPERFAMILY | 236 | 459 | 224 | 4.61E-31 | ||
| ProSiteProfiles | 237 | 270 | 34 | 9.853 | ||
| SMART | 237 | 270 | 34 | 6.5E-4 | ||
| ProSiteProfiles | 237 | 571 | 335 | 28.562 | ||
| Pfam | 244 | 276 | 33 | 3.0E-8 | – | |
| ProSiteProfiles | 271 | 304 | 34 | 6.697 | ||
| SMART | 271 | 304 | 34 | 0.19 | ||
| SMART | 305 | 338 | 34 | 190.0 | ||
| ProSiteProfiles | 424 | 457 | 34 | 9.116 | ||
| SMART | 424 | 457 | 34 | 13.0 | ||
| Pfam | 431 | 504 | 74 | 1.8E-6 | – | |
| ProSiteProfiles | 470 | 503 | 34 | 7.523 | ||
| SMART | 470 | 503 | 34 | 27.0 | ||
| SUPERFAMILY | 475 | 586 | 112 | 7.09E-28 | ||
| ProSiteProfiles | 504 | 537 | 34 | 6.579 | ||
| SMART | 504 | 537 | 34 | 5.1E-5 | ||
| Pfam | 506 | 535 | 30 | 1.4E-6 | ||
| SMART | 538 | 571 | 34 | 3.7 | ||
| ProSiteProfiles | 538 | 571 | 34 | 6.667 | ||
| SUPERFAMILY | 589 | 692 | 104 | 5.3E-12 | ||
| Gene3D | 594 | 701 | 108 | 1.0E-12 | ||
| CDD | 611 | 694 | 84 | 2.29002E-15 | – | |
| Pfam | 632 | 692 | 61 | 5.6E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi1g1v0147000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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