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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0147600 |
| Transcript ID | LotjaGi1g1v0147600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-xylosidase, putative; TAIR: AT1G78060.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7; TrEMBL-Plants: tr|A0A1J7HJ40|A0A1J7HJ40_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0147600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:25222892..25228713) extracted from Lotus japonicus Gifu genome v1.2.
GCCAAGCACGTTATCACAATATACAATAATAAGTTAAAACTCAAAATAAAGTAAACTGAAAATGTGTTGTTGGACATGTT CCCGTGACACTGGTCTTTATAACATGCTCTGTTCTCTGCAACCTGCACTCACCACTGCATCACATTCACAGCATGGCTCT CTTATCCCATGCCATCACCTTCTTCATCATCTCCTTCCTTTACCTAACTCACCACCAACTCGCCCACGCCCAGTCACCAA CTCAGCCACCTTACTCCTGCGGCGCTCACTCCAACTCCTACACCTTCTGCAACTCCAAGCTCCCCATCACTCAAAGAGCC AAGGACCTCGTGTCACGACTCACCCTTGACGAGAAGCTCTCCCAGCTCGTCAACTCAGCGCCACCGATCCCCCGCCTCGG GATCCCGGGCTACCAGTGGTGGAGTGAAGCTCTGCACGGCGTTGCAGACGCTGGCAAGGGCATTAGATTCAATGGCACTA TAAAATCAGCAACTAGTTTCCCCCAAGTCATTCTCACCGCGGCTTCATTCGACGCCAATCTCTGGTACCAAATTAGTAAG GTACGTACCGAGTTTTGCACACCAACTGCTTTTGTGTTTTTGCATCTACCATTTAATCCGCAACTCATTTTCCCCAAGTT ATTTTTCAACAATAAAGTGAATAATCTACATTTTTTTGAAGGTGATTGGAACAGAAGCTAGAGCGGTGTACAATGCGGGG CAAGCTCAGGGGATGACATTTTGGGCTCCAAACATTAACATTTTCAGGGATCCGAGATGGGGGAGAGGGCAAGAAACTGC AGGTGAAGATCCTATGGTGAATGCTAAGTATGCTGTGGCGTATGTTAGAGGGCTTCAAGGGGATTCATTTGAAGGAGGGA AATTAGGGGAGCGTCTTCAAGCTTCAGCTTGCTGCAAACATTTCACTGCTTATGATTTGGATAATTGGAAGGGTTTGGAT CGCTTCGACTTCGATGCTCATGTAATTATAGAACAGTAGAACTAAATAACTAAAAGTAATTAATTAATAATATAAAATAT TAATCCTCTGGATCCATTGGTTATTAGTTAGTTTAGTTTATTCTATTTCTTGGTATGTTTTGTTTTTTATTTAGAAAAAG TAATTGCTTTATTATTTTGTTTTATGCCGTTGATGGGTGTTTGGAACTTGGGACCATGATGTCGGGTAGTCGCGTGTTAT TTGGTCTTTTTCTGTGAGTTTGAAGAAAATTTCTTTTTTTATTAGTAAAAGTTGTTCATTAGATTGGATTCTTTCAAATT TTAGCTATAGTGGTGCTGTCAATTACAATAATGGTTAAGGGATACCTATTTAAATGTACATGCTATAAAATAATAGAGTG CAAATGAGTTGTCTAATTTACCCTATATTGTCATTTAACCCTATCTTAGGGGATTCATCAATGATGTTTTTAAGATATAG AACATGTTAGAACATCATGGGGTAAGTTAGATAACTTGAGTGAAAAATGAAGTAAATATGAATAAGCGGCGATACATATG ATATATAATGTAATGTGATTGAAAAATTATGATAGATTGAAAATTATGGTAAATATTGGATAAAATCATATTAATATTTT GACGTATGCCTGAGGAAATTTTAATTCATAACACGTGCAGTGTTAAATATTATTGGGTCACCTAATAATATTATTGGGCT AGCTGCTTCGGAAGAGTAATCATTTATGCACATGATTTCCAGCTATAGTTGTTTATAGCTACGACAAACATTAGAAACGG TTAAAAATCGTCACTAAATCGTATGTAAATTGCATGTAACTAGAAATTATGTCGGAGTAACATTAGTATTTTCTGAATTG TTCAATTTAAATTGTTTTTGATGCAGGTGACTCCGCAAGATTTGGCGGACACCTATCAACCCCCATTTCACAGCTGCATA CAACAAGGGCGAGCAAGTGGAATAATGTGTGCTTACAACCGTGTCAATGGGGTTCCAAATTGTGCAGATTTCAATCTCTT AACCAACACCGCAAGAAAACAATGGAATTTCAATGGGTATATTAGCTAGCTTTTCTCCTTTTCAAGCAATGGTCTCACTA GTGAACTTGAGAAGAGAGAATGACACTTTTATTCCCTTTTGGTGAAACTTCTTTTCCAATTTGAAAGTTTTAATTTTAAG CTATCACTGGAATGTGAGAGTGACACATTACCTTTTTATTCACTAATTGGAACGCTTTTGTTTTTGGATTTTAATACTTA ATATCAGGTATATTACGTCGGATTGTGGAGCAGTCTCGATCATACACGATAGGCAAGGCTATGCAAAAACAGCAGAGGAT GCTGTGGCTGATGTCCTTAGAGCTGGTATATTGCCATTTGCCACTCTTCTCTTTTCAATCCTTAATATTTTCTTCCTTTG TTTATATGATCATAGAGATATAGTATAAATAAATCTTTATGTAAATGAAATCACAATGTGAAGAGGGTAATTATCTAATC CTATTGATGTAATAATGTTCCCAATGCAAGATGCTTTTCTCACTTGTCTTAGGCCAGTTTACTTTCTTTGCCCATGTTAC TAGCAAAGTCATATGGTTTTGGTCCACATTTTTTAAAGGTCACCCCCACGCATGCCGCATGCCATTGCCAAATTTTATGC TCTTTCACACCACTTTTCTATATAAAAATTGATCCCATGGACCTACACCTTTCAGGAGGATCCCTTGAATCATATGTACT AGCTTAGTTCGGATGCAAGAAGACACATATTTCAAAGCATGTTAATCCTAGATTTGTTTTAGTTAGGAGTTCAAATTTCA CGTTAAGCCCTTGAAACCGCATCAAGCAAAAAATCACACAATTTAGCTTAAGCATTAGGGTTCGGCGATTTAGACTTTGG TGAGATCGACAATTGCTCGATATCCAGATTTTGTGGCAGTTTTGAATTACCATAAATTATGGAGTTATTAAAAAAAGGAA AAACACATTTCTGGTGGTCATGTTGGGTAACGGACCACCAGAAATGATTTTTTGTAACTCTACGATTTGGTTGAACAACA CAATTCTAGGATTCAATAATCATTTTTGTAAGCATTAACATGTATTGACGTGTGTGCAAAAGTTTTTCCAAACACACATA TATAGTAGATCCAATTGAATGTGATCCTAACAGAACCCAAGAAGAAATAGTTGTTACTCACTACTCCCATGATTTCTGTC AAATAACATAGCTAATTTTATTACATCAGCATTTCTTGCAACTTTCCTTTGTAACATATAGCATTTTTGTGGGATATGGG ACTTTAAAGGTCTTTGAAGATCATTCAAGATTTAATACTAATGTAATTTTGATGGACCGTGATGATTGACTTGATTGTGT TATGAAATTTTCCAGGGATGGATGTGGAATGTGGTGATTACTTGACAAAGCATGGTAAATCAGCAGTTTTGCAGAAAAAA GTACCAATATCTCAAATTGACCGTGCCCTTCACAATCTCTTCTCCATTAGAATTAGGCTAGGCCTATTTGATGGAAACCC TTCCAAGCTCACATATGGCTCAATTGGTCCCAACCAAGTCTGCTCCAAACAAAACCTAAAACTAGCACTCGAAGCCGCCA GAAACGGTATTGTCCTTTTAAAAAACACTGCATCAATTCTCCCCCTTCCAAAAACAAACCCAAGCATTGCAGTGATAGGC CCCAATGCCAATGCTTCATCACTAGCTGTTCTAGGAAACTACTATGGCCGTCCTTGTAAACTGGTCACTCTGTTGCAAGG CTTCCAGCACTATGCTAAGGATACCATTTATCACCCTGGTTGTAGTGATGGAACACAGTGTGCTTCTGCTGAAATAAACG AGGCGGTGGAAGTTGCGAAAAAAGTGGATTATGTGGTGCTGGTTATGGGGTTGGATCAAAGTCAAGAGAGGGAATCACAT GATCGTGATTTCTTAGAGTTACCAGGGAAGCAACAGGAACTGATTAATAGTGTTGCCAGTGCTTCTAAGAAACCTGTTAT TTTGGTCCTCTTGTGTGGAGGTCCTGTGGATATCACTGCAGCTAAGTTTAACAAAAATGTTGGAGGCATATTGTGGGCTG GTTATCCTGGTGAACTTGGAGGAGTGGCACTGGCCCAGGTTATCTTTGGAGACCATAACCCAGGTGAATTTTCTACTATA CCCACGAACAAATAAACACATTTATAGAGTTGTTTAACTTACACTAGGTATTGGATAATGTGGTCAAGAGATAGGTTTGT TGAGAATTACACTATTTTCTTTGCTTGAATTTTCATAAACAAAATTACAGAACCATCTCGGAGGAGACTATTAAACTTCT TGTGATTAGTTTGACAACCCAGAATATGAAATAAAAGCTTAGCACTTCTTTTAGAAGTATCATTCTTGGATTTCAGAATT GGGGCGAAACTTTTCACGTTAGAATTAGGCACAAACTGAAATTTTAGATGGAATCAAAACCTATCATCGATCCATTGATT AGGCAATTTATAAATGATTCACTCGCAAATGTTCAGTAAACTTCACACTCAGATGTCCATCTTTGGGCATGGGCATGAGG GGTGTTAAGGTTCCACATTGACTAGATATAGCTAACTAAGTCATTATCAAGAGTAAAACAATCTTTGATTTTAAGCTACC ATTTGGGTGAGAATTACTTAAACCGAATTCTAAAATGGACAAACTAAAATTTACACATTAGTCTTCAGGTTTCTCCATGC AAGTCACATTATAATTTTAGCATAACATTTTTCTTGATACCCAAATTGGAATAGGGTACATGCCTTAAATAATTTTTACG AAAGCATCTTTTCCTAAAGCTATTTTTAATCAAATGGGGTGCTTTCTATGATCACTACAATGCAGGAGGAAGACTACCAA TTACTTGGTACCCAAAAGACTTCATCAGAGTACCAATGACAGACATGAGGATGAGAGCTGATCCAGCATCAGGCTACCCC GGAAGAACCTACCGATTTTACACAGGTCCAAAGGTCTATGAATTTGGCTATGGTCTAAGTTACTCAAAATACTCCTACGA GTTCGTATCCGTCACACAAAACAACCTTCACATCAACCAGTCATCCACTCATTTAACGGTTGATGAAAACTCCGAAACCA TCCGTTACAAGCTGGTTTCGGAGCTCGGTGAAGAGACTTGTCAAAGCATGTCTGTCTCGGTGACTTTGGGAGTTAAAAAT GATGGAAGCATGGCGGGGAAGCATCCAGTGTTGCTGTTTATGAGGCAGGGGAAACAGAGAAATGGAAACCCTTTAAAACA GTTGGTAGGTTTTCAAAGTGTGAAGCTAGATGCAGGGGAAAGGGGTGAAGTTGGGTTTGAACTTAGCCCCTGTGAGCATC TTAGCATTGCAAATGAGGGAGGTGTAAAGGTGATACAAGAGGGGTCTTATTTATTACATGTTGGGGACAAAGAGTACCCT ATGAATATCTCTGTTTGATGATGATGCTGCAATGGATTGAGTCTTCAATAAGGTAAAGGGGTAAAGCAAATTTATTTGCA GCTAGTCTATGAAATTGAAATTTCGATTGGCTCTAGTGAAGGAATCATTATCAATTTATCATTATTTCCAGTGTTCTTCA CCAGAGTAGAATTATGCTATTATATTTTCCGATGCAGAAAAGAAAAAAAGAGTTATGCTATTATTTCCTATTTGAAACAT ATCAGTTCACAAAACTTTTACACGTGGTGATCAACAATTGAATGAGTTGTTGCAAAAATACAGTAAAAGAAATCTAGGAT GCACGAGTATGGGTACGGTACCGGGTACTGGTGCGACATTTTTCAAAAAATCATGGGTACGG
CDS sequence (LotjaGi1g1v0147600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTCTTATCCCATGCCATCACCTTCTTCATCATCTCCTTCCTTTACCTAACTCACCACCAACTCGCCCACGCCCA GTCACCAACTCAGCCACCTTACTCCTGCGGCGCTCACTCCAACTCCTACACCTTCTGCAACTCCAAGCTCCCCATCACTC AAAGAGCCAAGGACCTCGTGTCACGACTCACCCTTGACGAGAAGCTCTCCCAGCTCGTCAACTCAGCGCCACCGATCCCC CGCCTCGGGATCCCGGGCTACCAGTGGTGGAGTGAAGCTCTGCACGGCGTTGCAGACGCTGGCAAGGGCATTAGATTCAA TGGCACTATAAAATCAGCAACTAGTTTCCCCCAAGTCATTCTCACCGCGGCTTCATTCGACGCCAATCTCTGGTACCAAA TTAGTAAGGTGATTGGAACAGAAGCTAGAGCGGTGTACAATGCGGGGCAAGCTCAGGGGATGACATTTTGGGCTCCAAAC ATTAACATTTTCAGGGATCCGAGATGGGGGAGAGGGCAAGAAACTGCAGGTGAAGATCCTATGGTGAATGCTAAGTATGC TGTGGCGTATGTTAGAGGGCTTCAAGGGGATTCATTTGAAGGAGGGAAATTAGGGGAGCGTCTTCAAGCTTCAGCTTGCT GCAAACATTTCACTGCTTATGATTTGGATAATTGGAAGGGTTTGGATCGCTTCGACTTCGATGCTCATGTGACTCCGCAA GATTTGGCGGACACCTATCAACCCCCATTTCACAGCTGCATACAACAAGGGCGAGCAAGTGGAATAATGTGTGCTTACAA CCGTGTCAATGGGGTTCCAAATTGTGCAGATTTCAATCTCTTAACCAACACCGCAAGAAAACAATGGAATTTCAATGGGT ATATTACGTCGGATTGTGGAGCAGTCTCGATCATACACGATAGGCAAGGCTATGCAAAAACAGCAGAGGATGCTGTGGCT GATGTCCTTAGAGCTGGGATGGATGTGGAATGTGGTGATTACTTGACAAAGCATGGTAAATCAGCAGTTTTGCAGAAAAA AGTACCAATATCTCAAATTGACCGTGCCCTTCACAATCTCTTCTCCATTAGAATTAGGCTAGGCCTATTTGATGGAAACC CTTCCAAGCTCACATATGGCTCAATTGGTCCCAACCAAGTCTGCTCCAAACAAAACCTAAAACTAGCACTCGAAGCCGCC AGAAACGGTATTGTCCTTTTAAAAAACACTGCATCAATTCTCCCCCTTCCAAAAACAAACCCAAGCATTGCAGTGATAGG CCCCAATGCCAATGCTTCATCACTAGCTGTTCTAGGAAACTACTATGGCCGTCCTTGTAAACTGGTCACTCTGTTGCAAG GCTTCCAGCACTATGCTAAGGATACCATTTATCACCCTGGTTGTAGTGATGGAACACAGTGTGCTTCTGCTGAAATAAAC GAGGCGGTGGAAGTTGCGAAAAAAGTGGATTATGTGGTGCTGGTTATGGGGTTGGATCAAAGTCAAGAGAGGGAATCACA TGATCGTGATTTCTTAGAGTTACCAGGGAAGCAACAGGAACTGATTAATAGTGTTGCCAGTGCTTCTAAGAAACCTGTTA TTTTGGTCCTCTTGTGTGGAGGTCCTGTGGATATCACTGCAGCTAAGTTTAACAAAAATGTTGGAGGCATATTGTGGGCT GGTTATCCTGGTGAACTTGGAGGAGTGGCACTGGCCCAGGTTATCTTTGGAGACCATAACCCAGGAGGAAGACTACCAAT TACTTGGTACCCAAAAGACTTCATCAGAGTACCAATGACAGACATGAGGATGAGAGCTGATCCAGCATCAGGCTACCCCG GAAGAACCTACCGATTTTACACAGGTCCAAAGGTCTATGAATTTGGCTATGGTCTAAGTTACTCAAAATACTCCTACGAG TTCGTATCCGTCACACAAAACAACCTTCACATCAACCAGTCATCCACTCATTTAACGGTTGATGAAAACTCCGAAACCAT CCGTTACAAGCTGGTTTCGGAGCTCGGTGAAGAGACTTGTCAAAGCATGTCTGTCTCGGTGACTTTGGGAGTTAAAAATG ATGGAAGCATGGCGGGGAAGCATCCAGTGTTGCTGTTTATGAGGCAGGGGAAACAGAGAAATGGAAACCCTTTAAAACAG TTGGTAGGTTTTCAAAGTGTGAAGCTAGATGCAGGGGAAAGGGGTGAAGTTGGGTTTGAACTTAGCCCCTGTGAGCATCT TAGCATTGCAAATGAGGGAGGTGTAAAGGTGATACAAGAGGGGTCTTATTTATTACATGTTGGGGACAAAGAGTACCCTA TGAATATCTCTGTTTGA
Protein sequence (LotjaGi1g1v0147600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALLSHAITFFIISFLYLTHHQLAHAQSPTQPPYSCGAHSNSYTFCNSKLPITQRAKDLVSRLTLDEKLSQLVNSAPPIP RLGIPGYQWWSEALHGVADAGKGIRFNGTIKSATSFPQVILTAASFDANLWYQISKVIGTEARAVYNAGQAQGMTFWAPN INIFRDPRWGRGQETAGEDPMVNAKYAVAYVRGLQGDSFEGGKLGERLQASACCKHFTAYDLDNWKGLDRFDFDAHVTPQ DLADTYQPPFHSCIQQGRASGIMCAYNRVNGVPNCADFNLLTNTARKQWNFNGYITSDCGAVSIIHDRQGYAKTAEDAVA DVLRAGMDVECGDYLTKHGKSAVLQKKVPISQIDRALHNLFSIRIRLGLFDGNPSKLTYGSIGPNQVCSKQNLKLALEAA RNGIVLLKNTASILPLPKTNPSIAVIGPNANASSLAVLGNYYGRPCKLVTLLQGFQHYAKDTIYHPGCSDGTQCASAEIN EAVEVAKKVDYVVLVMGLDQSQERESHDRDFLELPGKQQELINSVASASKKPVILVLLCGGPVDITAAKFNKNVGGILWA GYPGELGGVALAQVIFGDHNPGGRLPITWYPKDFIRVPMTDMRMRADPASGYPGRTYRFYTGPKVYEFGYGLSYSKYSYE FVSVTQNNLHINQSSTHLTVDENSETIRYKLVSELGEETCQSMSVSVTLGVKNDGSMAGKHPVLLFMRQGKQRNGNPLKQ LVGFQSVKLDAGERGEVGFELSPCEHLSIANEGGVKVIQEGSYLLHVGDKEYPMNISV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 1 | 777 | 777 | 0.0 | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| PANTHER | 1 | 777 | 777 | 0.0 | – | |
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 26 | 8 | - | – | |
| Phobius | 27 | 778 | 752 | - | – | |
| SUPERFAMILY | 43 | 402 | 360 | 3.05E-88 | ||
| Gene3D | 54 | 390 | 337 | 1.1E-87 | ||
| Pfam | 108 | 361 | 254 | 7.8E-36 | ||
| PRINTS | 116 | 135 | 20 | 2.7E-5 | ||
| PRINTS | 210 | 226 | 17 | 2.7E-5 | ||
| PRINTS | 284 | 302 | 19 | 2.7E-5 | ||
| Gene3D | 391 | 636 | 246 | 3.9E-62 | ||
| Pfam | 404 | 634 | 231 | 6.1E-54 | ||
| SUPERFAMILY | 404 | 637 | 234 | 1.16E-48 | ||
| Gene3D | 670 | 777 | 108 | 8.2E-16 | ||
| SMART | 701 | 771 | 71 | 3.4E-13 | ||
| Pfam | 703 | 769 | 67 | 1.9E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0147600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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