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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0231400 |
| Transcript ID | LotjaGi1g1v0231400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q9FI14|TAO1_ARATH Disease resistance protein TAO1; TrEMBL-Plants: tr|K7K3H1|K7K3H1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0231400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:54227519..54232814) extracted from Lotus japonicus Gifu genome v1.2.
AATATTGATGCTGAATTACTGTACGGTCAAGTGTGAAATTGCTTCTTCTTGTTTCTATTAAGTTGCAGATCCTAACAGCT ATAAGCGCATAAGGTTAAGTATTCAAGGTTAATTGTTTATTTACTCAATCATTTTTGGCAATAGATCCACTGAGAATGAG CTTGCTTGCTTACTTGCTTGTTTATACAGATTAAATTGATTATTGGTCATGCTTATTTGTTGTCATAATTTGATGATTTC CTCTTCCCTTCACTCCTTTTGACTGTTCCTGGAATATAGAAAAAATGCATTATAACTTGAAAAGGGTGTGTAGTTTGTAT TCACTAACTAATTAGTAATTGCTTACTATGAGTCCCACATTGCCACTCAACAACATAGAACCCTTCATTACCAGCTATAA AACATGAGACAAGGACTGAGTGCTAGCATACAATTCACAAGCAATTTTTTTCTCTCTGTTGCCAAATCTAGATTTTGAAT TTGGCCCAGTTCTTGAAATATTTTGATTTTGATATTGCCCATTTTTGAAATTTGGATTTGCCACAATGGTAAAAAATTGG GGTCACCCTTTATTTGACTGTTCCTCCTGTTTTCACTCTTTCTATTTCTTTCCAGTTACTTACAAACCATCGACCTTATA TTCAGGGTTAGAGAGACAAAGAAAGAATGATTCAGTGAGACCTTGTTCCAATTCAACGACACACACTATTTCTTATTTCA GAAATTGAATATATATGTTGTATTTCTTTGTCTTTTTGTCATTTCTGTTGTTAGTGTTGTTTTCCTTTATCTGTCAGTTG CTTCTGAAACAGAAGGAGGATATAGCAGCAAAGACCATGTCAAACAACGCTCCTCATACAAAAGACAAGTATGATGTTTT TGTTAGCTTCAGGGGCGAGGACATTCGCGACGGTTTTCTCAGCCATCTGGCAGAGGCTTTTCGTCGAAAGAAAATAAATG CCTTCGTGGATGACAAGCTTCAGAGGGGAGAAGAAATATGGCCATCACTTGTTGGAGCCATTGAAGGATCATTGGTTTCA TTGATCATATTCTCTGAAAACTACGCTTCTTCACGTTGGTGTTTGAACGAACTGGTGAAAATACTTGAGTGCAGAGGCAA GTATGAACAGATTGTAGTACCAGTTTTCTACGGCGTAGATCCCACCGATGTACGACACCAAACAGGGAGTTATGAAACTG CATTTCTTGAGCATGGGAAATATTTTGATCCGACCATGCTGAAAATATGGAGTGATGCTTTGAACAAATCTGCTGATTTA TCTGGAATTAAGTCATCAGATTCTCAGTAAGCATCTTTTTCTAAAATTAAGTGTTTCATAATTTCTTGCTTTTTTCTGAC AAATTTGCATAATTGGGTTTTTGATTGCAAAATGACATGTCTATTTAGTATTTTTTAGGTTACTTTTACTAGAATGTGTG CACTTTATTAATTATATCTTCCACATGTATTGGCCAATGCACCGGTTCTTGGTAGGACTTAAAAGAGGATAGTTCATGCT TTATTGGTTCATTAAATATAGTGGCTAAGTTTTAGACCCAAGTAATACAATTAAACTTATTCCAAATTCCAAATGATAAA TAAAAATGTAGCTTTTCATTAAGGACCCGTTATTTTATTCCAACCAAGTGAGCTAAATAATTGTAATGCCATTCTCTTCT CTCTATCTGTTGTTTTAAAGGAATGATGCTGAGCTACTTGATAATATCACCAATGATGTGTTGCATCAGCTAAGTAGGTT GAGTAAGCACACACTTAACTCAAAAGGACTTGTTGGAATTGGAAAATCATTTGCTGATGTAGAAGCCTTGCTGCTTAAAG ACTCAAAAGATGTCCGCATTATCGGAATTTGGGGTATGGGAGGTATCGGCAAGACAACTATTGCAGAACAAGTGTTCAAT AAAATATGTTCTGAGTATGAAGGTAGCTGTTTTTTGTCAAATGTAAGAGAAGACTCAACAAGACATGGAATAATTTATTT GAAAGAAAAACTTTTCTCCACACTATTAGCAGAAGATGTGAAAATGAAGTCACCAAATGGATTGTCTGATGATATTGGGA GAAGGATTAGTCGTATGAAGGTTCTCATTGTTCTTGATGATGTGAATGATTCAGATCAGCTTGAATTATTTGGAACTGTT GACACGTTTGGACCAGGTAGTAGAATAATTGTAACAACTAGAGATCAACAAGTGCTCATCGCTAATAAAGTTGATGATAT ACTTCACGTTGGAGAATTGAGCTCTAGTGAATCACTTGAGCTTTTCAATTTGATTGCCTTGAACCATAGTCACCTTGTAA GGGAGTACTATGAGCTAACAAAGAGGGTAGTCAAATATGCCAATGGCATTCCATTAGTTCTTAAAGTTTTGGGTCATCTT CTTTGTGGAAGAGATCAGAAAGCATGGGAAAGTCAGCTAGATAAGCTTATGGAAATGCCAAGTAAAAAAGTTTATGATGT AATGATATTGAGTTATGATGATCTAGACCGAAAAGAGCAACAAATTTTTCTGGATCTTGCATGTTTCTTTAAAGGATTGA ATTTGAAGGTGGACTCCATCAAAACTTTACTGAAAGATAATGAAAGTGATAATTCAGTGGCTCATGGGTTAGAGAGGCTG AAAGATAAGGCTCTTATAACTATTTCTGAGGATGATGTTGTATCTATGCATGATATTATAGAAGAAATAGCTTGGGAGAT TGTTCGCCAAGAATCTAGAGAAGACATTGGAAGCCAAAGTCGATTGGGGGATGCAGATGACATTAACAAAGTATTAGAAA ATGACAAGGTATAGTACCTAAATTAAAAATAATATCTTTTTGATAAACATTTTATACTTTTCTGAGAAATGTGTCTTTTA ATGATATTTAATCTTTTTTCTACATTGATGGCAGGGGAAAGAGGTTGTTAGAAGTTTACGGATGCACTCGTCAACAATGA GGACCAGGAAGCTCAAGTTAAGCTCTCACATATTTGTTATGATGAGCAAACTACAATTTCTAGATTTTTATAGTGACCAT AATATTCTAGACAGTGATGTTCTTCTTCCTAAAGGACTGAAATCATTGCCAACTGAACTAAGATATCTTCGTTGGTGGCA TTACCCTTTGAAATCCTTGCCAAAGAAATTTTGTGTAAATTTATTGCAGAACCTGGTTAATTTAAAACAAGTTAAACTCT ATCGTTGTGCATCCTTGAAGGAGCTACCAGACTTTTCAAAAGCCACAAATCTTGAAGAAGTAAATGTCATGCATTGTTAT GACTTGACTGATGTGCATCCGTCTATTTTCACTCTTGACAAGCTTGAGAAATTGGAGCTTAGTCGCTGCTCTTCCCTCAC CAGCCTTACAAGCAATGCTCAATTAAGCTGCCTCAGTCATGTACTATGTAACTCTCGATCTTTGGAGGAGCTTCCAGACT TTTCAAAAGCCACAAATCTTTTAGTGCTTGATGCAAGTTACTGTGATCGGTTGACTAATGTGCATCCGTCCGTGTTTTCT CTTGACAAGCTTGAGAAATTGGATCTTAGTTTCTGCTCTTCCCTCACCAGCCTTACAAGCAATGCTCAATTAAGCTGCCT CAGTCATCTCAACCTACAAAGTTGCAGTAAACTAACAGAATTCTCTGTGACATCAGAGAATATGGTAGAACTAAAACTAG GAGGAACTAAAATCAAAGCATTGCCCCCATCATTTGGTAGTCAAAGAAAGCTTGAAATTCTATATTTAGAAGAAACTATA ATTGAGAGCTTACCATCATGCATGGTGAATCTCACAAGACTACGATATCTAGACCTAAGATTTTGTTCTATGCTTCAAAC AATTCCAGAGTTTCCACCGTCCCTTGAAACTCTACTTATCCAAGACTGCAGTTCATTGAAGACAGCGTCGTTCCCTTCAA CAGCTACTAAACAATTCCAGGAGAACAAGAAAAGGGTCGAGTTCTTTAATTGTGAGAGGTTGGATGAAGATTCTCTCATG GCTATTGGGTTGAATGCGCGTATCAATGTGATGAAATTTGCACAGCAACATCTATCTGCATTGAAGCATGATTTTGTTGA AAACTATGATGATTACTTCCATAATTATCATTCTTATCAGTCTGTGCATGTATTTCCAGGAAGCAGAGTACCAGAGTGGT TGGTATATAAGTCAACGAGGGGTTCTGTAATTATTGATCTCTTTTCTCCTCCAACTTCCCCTCCGTATGGCTTCATTTTC TGCTTCATCATTTATGAGTACCGAGTGTATCGGACCAGATTGAAATTCAAAGTCAGCATCAGGGATAGTGCAGGTGAAGA TGATGCTGGTGAAGATGAAAAGGATAGCGTTGATGTTTACACGTCTTTTAACTACTCAATTTTCACAAGAGATCATGTGT GTGTGATATACGACCAAAGATGTTCTCGCTACTTAAGTAGTAGATCACAAAATCTGTCAAGGTTCCAAATCAAGGCTACC GCATGGTTTGTAGTACTTGGTGAAAAACAGAGGATAGAATTAAAAGCGTTTGGGGTGAGCCTAATAAGCACATCCGCGTA TGACAGGTTCGTTCGACAAAAGGAATTGCATGATTCAGAGGGTATCTCTGTTCATTAATCAAATGGAATAGATTGTGCGT GGTATCATCCCATTTGGAACTGGAATGCACTATTTCCTCTTTTTTTTTGGTGTATCGGAAAGATAAATTGCACCCTTCAA AAATTGAACCTTGGACTTCCCCCTCCCAACCCATATGTCCCCTAGCTCTTACCACTTGAGCTATCACTCGGGGACATTTT CCTCTTATCTGTAATAAAAATATTGATTTAGTTGAGTATCTTATTTATTTCAATTTCAGTAGAACCTAATTGATTGGTTT CAATTTCAACAGTCAAGGGTATCCATTGAAGGTAAATATTGATGCAGGGTGGGCTGGAAGTGAAGGTACAGGGACTACAG GCTTTGGTTTGGTTATAAGGGATGAAAGGGGTTGTTTTCAAGCTGCAGCGTCCCATTATGTGCCTTATAGGATGGATCCC TTGTTAGCTGAAGCTTTGTGTTTGCGGTGGAGCTTAAGTGTGGTTGAAGATTGGGGGTTAGATCATGTGATGTTCTCCTG GGATTGCCAGCAATTAGTGGGAGCTTATAGGAATCCTAGAAGTTTTTTCCTGTTTTGCAGCTGAACGAACAAGACTGCAT GTCTCTAGCTAGGCACTTTTCCTTGTATCAATTAGTTTATGAGAAATAGAAGCACCAATAGGATGGCACATACTATAGCA GCCCAAAGTTTACTAT
CDS sequence (LotjaGi1g1v0231400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAACAACGCTCCTCATACAAAAGACAAGTATGATGTTTTTGTTAGCTTCAGGGGCGAGGACATTCGCGACGGTTT TCTCAGCCATCTGGCAGAGGCTTTTCGTCGAAAGAAAATAAATGCCTTCGTGGATGACAAGCTTCAGAGGGGAGAAGAAA TATGGCCATCACTTGTTGGAGCCATTGAAGGATCATTGGTTTCATTGATCATATTCTCTGAAAACTACGCTTCTTCACGT TGGTGTTTGAACGAACTGGTGAAAATACTTGAGTGCAGAGGCAAGTATGAACAGATTGTAGTACCAGTTTTCTACGGCGT AGATCCCACCGATGTACGACACCAAACAGGGAGTTATGAAACTGCATTTCTTGAGCATGGGAAATATTTTGATCCGACCA TGCTGAAAATATGGAGTGATGCTTTGAACAAATCTGCTGATTTATCTGGAATTAAGTCATCAGATTCTCAGAATGATGCT GAGCTACTTGATAATATCACCAATGATGTGTTGCATCAGCTAAGTAGGTTGAGTAAGCACACACTTAACTCAAAAGGACT TGTTGGAATTGGAAAATCATTTGCTGATGTAGAAGCCTTGCTGCTTAAAGACTCAAAAGATGTCCGCATTATCGGAATTT GGGGTATGGGAGGTATCGGCAAGACAACTATTGCAGAACAAGTGTTCAATAAAATATGTTCTGAGTATGAAGGTAGCTGT TTTTTGTCAAATGTAAGAGAAGACTCAACAAGACATGGAATAATTTATTTGAAAGAAAAACTTTTCTCCACACTATTAGC AGAAGATGTGAAAATGAAGTCACCAAATGGATTGTCTGATGATATTGGGAGAAGGATTAGTCGTATGAAGGTTCTCATTG TTCTTGATGATGTGAATGATTCAGATCAGCTTGAATTATTTGGAACTGTTGACACGTTTGGACCAGGTAGTAGAATAATT GTAACAACTAGAGATCAACAAGTGCTCATCGCTAATAAAGTTGATGATATACTTCACGTTGGAGAATTGAGCTCTAGTGA ATCACTTGAGCTTTTCAATTTGATTGCCTTGAACCATAGTCACCTTGTAAGGGAGTACTATGAGCTAACAAAGAGGGTAG TCAAATATGCCAATGGCATTCCATTAGTTCTTAAAGTTTTGGGTCATCTTCTTTGTGGAAGAGATCAGAAAGCATGGGAA AGTCAGCTAGATAAGCTTATGGAAATGCCAAGTAAAAAAGTTTATGATGTAATGATATTGAGTTATGATGATCTAGACCG AAAAGAGCAACAAATTTTTCTGGATCTTGCATGTTTCTTTAAAGGATTGAATTTGAAGGTGGACTCCATCAAAACTTTAC TGAAAGATAATGAAAGTGATAATTCAGTGGCTCATGGGTTAGAGAGGCTGAAAGATAAGGCTCTTATAACTATTTCTGAG GATGATGTTGTATCTATGCATGATATTATAGAAGAAATAGCTTGGGAGATTGTTCGCCAAGAATCTAGAGAAGACATTGG AAGCCAAAGTCGATTGGGGGATGCAGATGACATTAACAAAGTATTAGAAAATGACAAGGGGAAAGAGGTTGTTAGAAGTT TACGGATGCACTCGTCAACAATGAGGACCAGGAAGCTCAAGTTAAGCTCTCACATATTTGTTATGATGAGCAAACTACAA TTTCTAGATTTTTATAGTGACCATAATATTCTAGACAGTGATGTTCTTCTTCCTAAAGGACTGAAATCATTGCCAACTGA ACTAAGATATCTTCGTTGGTGGCATTACCCTTTGAAATCCTTGCCAAAGAAATTTTGTGTAAATTTATTGCAGAACCTGG TTAATTTAAAACAAGTTAAACTCTATCGTTGTGCATCCTTGAAGGAGCTACCAGACTTTTCAAAAGCCACAAATCTTGAA GAAGTAAATGTCATGCATTGTTATGACTTGACTGATGTGCATCCGTCTATTTTCACTCTTGACAAGCTTGAGAAATTGGA GCTTAGTCGCTGCTCTTCCCTCACCAGCCTTACAAGCAATGCTCAATTAAGCTGCCTCAGTCATGTACTATGTAACTCTC GATCTTTGGAGGAGCTTCCAGACTTTTCAAAAGCCACAAATCTTTTAGTGCTTGATGCAAGTTACTGTGATCGGTTGACT AATGTGCATCCGTCCGTGTTTTCTCTTGACAAGCTTGAGAAATTGGATCTTAGTTTCTGCTCTTCCCTCACCAGCCTTAC AAGCAATGCTCAATTAAGCTGCCTCAGTCATCTCAACCTACAAAGTTGCAGTAAACTAACAGAATTCTCTGTGACATCAG AGAATATGGTAGAACTAAAACTAGGAGGAACTAAAATCAAAGCATTGCCCCCATCATTTGGTAGTCAAAGAAAGCTTGAA ATTCTATATTTAGAAGAAACTATAATTGAGAGCTTACCATCATGCATGGTGAATCTCACAAGACTACGATATCTAGACCT AAGATTTTGTTCTATGCTTCAAACAATTCCAGAGTTTCCACCGTCCCTTGAAACTCTACTTATCCAAGACTGCAGTTCAT TGAAGACAGCGTCGTTCCCTTCAACAGCTACTAAACAATTCCAGGAGAACAAGAAAAGGGTCGAGTTCTTTAATTGTGAG AGGTTGGATGAAGATTCTCTCATGGCTATTGGGTTGAATGCGCGTATCAATGTGATGAAATTTGCACAGCAACATCTATC TGCATTGAAGCATGATTTTGTTGAAAACTATGATGATTACTTCCATAATTATCATTCTTATCAGTCTGTGCATGTATTTC CAGGAAGCAGAGTACCAGAGTGGTTGGTATATAAGTCAACGAGGGGTTCTGTAATTATTGATCTCTTTTCTCCTCCAACT TCCCCTCCGTATGGCTTCATTTTCTGCTTCATCATTTATGAGTACCGAGTGTATCGGACCAGATTGAAATTCAAAGTCAG CATCAGGGATAGTGCAGGTGAAGATGATGCTGGTGAAGATGAAAAGGATAGCGTTGATGTTTACACGTCTTTTAACTACT CAATTTTCACAAGAGATCATGTGTGTGTGATATACGACCAAAGATGTTCTCGCTACTTAAGTAGTAGATCACAAAATCTG TCAAGGTTCCAAATCAAGGCTACCGCATGGTTTGTAGTACTTGGTGAAAAACAGAGGATAGAATTAAAAGCGTTTGGGGT GAGCCTAATAAGCACATCCGCGTATGACAGGTTCGTTCGACAAAAGGAATTGCATGATTCAGAGGGTATCTCTGTTCATT AA
Protein sequence (LotjaGi1g1v0231400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNNAPHTKDKYDVFVSFRGEDIRDGFLSHLAEAFRRKKINAFVDDKLQRGEEIWPSLVGAIEGSLVSLIIFSENYASSR WCLNELVKILECRGKYEQIVVPVFYGVDPTDVRHQTGSYETAFLEHGKYFDPTMLKIWSDALNKSADLSGIKSSDSQNDA ELLDNITNDVLHQLSRLSKHTLNSKGLVGIGKSFADVEALLLKDSKDVRIIGIWGMGGIGKTTIAEQVFNKICSEYEGSC FLSNVREDSTRHGIIYLKEKLFSTLLAEDVKMKSPNGLSDDIGRRISRMKVLIVLDDVNDSDQLELFGTVDTFGPGSRII VTTRDQQVLIANKVDDILHVGELSSSESLELFNLIALNHSHLVREYYELTKRVVKYANGIPLVLKVLGHLLCGRDQKAWE SQLDKLMEMPSKKVYDVMILSYDDLDRKEQQIFLDLACFFKGLNLKVDSIKTLLKDNESDNSVAHGLERLKDKALITISE DDVVSMHDIIEEIAWEIVRQESREDIGSQSRLGDADDINKVLENDKGKEVVRSLRMHSSTMRTRKLKLSSHIFVMMSKLQ FLDFYSDHNILDSDVLLPKGLKSLPTELRYLRWWHYPLKSLPKKFCVNLLQNLVNLKQVKLYRCASLKELPDFSKATNLE EVNVMHCYDLTDVHPSIFTLDKLEKLELSRCSSLTSLTSNAQLSCLSHVLCNSRSLEELPDFSKATNLLVLDASYCDRLT NVHPSVFSLDKLEKLDLSFCSSLTSLTSNAQLSCLSHLNLQSCSKLTEFSVTSENMVELKLGGTKIKALPPSFGSQRKLE ILYLEETIIESLPSCMVNLTRLRYLDLRFCSMLQTIPEFPPSLETLLIQDCSSLKTASFPSTATKQFQENKKRVEFFNCE RLDEDSLMAIGLNARINVMKFAQQHLSALKHDFVENYDDYFHNYHSYQSVHVFPGSRVPEWLVYKSTRGSVIIDLFSPPT SPPYGFIFCFIIYEYRVYRTRLKFKVSIRDSAGEDDAGEDEKDSVDVYTSFNYSIFTRDHVCVIYDQRCSRYLSSRSQNL SRFQIKATAWFVVLGEKQRIELKAFGVSLISTSAYDRFVRQKELHDSEGISVH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 3 | 150 | 148 | 1.57E-37 | ||
| PANTHER | 7 | 687 | 681 | 0.0 | – | |
| PANTHER | 7 | 687 | 681 | 0.0 | – | |
| Gene3D | 9 | 178 | 170 | 7.2E-62 | ||
| ProSiteProfiles | 10 | 148 | 139 | 25.209 | ||
| Pfam | 11 | 190 | 180 | 1.4E-43 | ||
| SMART | 11 | 148 | 138 | 6.9E-46 | ||
| SUPERFAMILY | 175 | 436 | 262 | 2.13E-56 | ||
| Gene3D | 179 | 337 | 159 | 3.0E-30 | – | |
| Pfam | 200 | 412 | 213 | 4.2E-29 | ||
| PRINTS | 210 | 225 | 16 | 8.7E-24 | – | |
| PRINTS | 285 | 299 | 15 | 8.7E-24 | – | |
| PRINTS | 377 | 391 | 15 | 8.7E-24 | – | |
| SUPERFAMILY | 486 | 859 | 374 | 4.08E-39 | – | |
| Gene3D | 514 | 749 | 236 | 2.2E-19 | ||
| PANTHER | 690 | 1085 | 396 | 0.0 | – | |
| PANTHER | 690 | 1085 | 396 | 0.0 | – | |
| PRINTS | 727 | 743 | 17 | 8.7E-24 | – | |
| Gene3D | 750 | 889 | 140 | 1.9E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0231400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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