Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0264000 |
| Transcript ID | LotjaGi1g1v0264000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SWI/SNF complex subunit SWI3C; TAIR: AT1G21700.1 SWITCH/sucrose nonfermenting 3C; Swiss-Prot: sp|Q9XI07|SWI3C_ARATH SWI/SNF complex subunit SWI3C; TrEMBL-Plants: tr|G7J4Z5|G7J4Z5_MEDTR SWI/SNF complex protein; Found in the gene: LotjaGi1g1v0264000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:64650364..64665077) extracted from Lotus japonicus Gifu genome v1.2.
ATAACCACATCTCTCATGGCTTTGTCCGTTTAAACACATTATTATTCCTCCTTGTCCAGACTAGATTTGGATTTTCATCC TGAGACTGACAAAAAAGAAAAAGGAAAGGCAGCTCGAGCGCGTCAACCCCCGCGTGCAAAACACGACCGAATAGAAACCC CGCGTTACCGACACGCGCATGCAAATCCAACCACGCGAGGAAATTTTACTCTGCACCCACCATTTTCATTCTGGTATCCT CTTCCATCAAACACAGTTTTTGCCCCAAAACTGAAAGAAAACCAGATTTTTCACTCCACACACACACACCACTCACGCAT CAGAGAAAGAGAAAGAGAAAGACTCGATCCTGAACCTACAAATAATTTTCTTCCCTTTGCGCCAATCAACGACCCCACAA TCCAAAATTTTCCTCTCAATTTCCCTCTCTTTCTCTCTCTTAAACCCTTCTCTTCCTTCCTCCTTGTTACCATGCCAGCT TCCCCTTCAGGTATTTTCTTCTTCTTCTTTCTCTCTCTAAAACCCTCATTTTCATTTCTCTCTATTTTCTCTCTGATTTC TCTACAATGCCAACCCTATTTTTTTCCAATTGATGCGATTTTTGATTTTTGATTTTGTGTTTTTGGCAGAAAACCGAACC AAATGGAGGAAGCGGAAGCGGGACTCCCAAATCAGCCGCCGGAAGCACCACGAGGACGACGACGACGACGACGAGGAAAA CCCCAACGCGGCGGAGGACGACCACCACGACTACGACGACTCCGAGGACCACAACCACAACCACAACCACCCTAATTCCC AACCGCACCACCACGAGATGGAGGTTCTGTCAGATCACCCGGTCCAGATTTCGGTGTTCCCGTTGGTGGTGAAGCGCACC GTCAACCGCCCTCACTCCTCCGTCGCCGCAATCGTGGCTCTTGAACGAGCTATTGAGTTGGGAGATAGTGGCAGCAACAG CAACAAGGGTCAGGTGCAGAACCCTACTCCGTTGCTGGAGAATGTGTCATACGGCCAGCTTCAGGCGCTCTCCGCCGTGC CCTCTGATAGCTCCGCTTTCGATCAGGACCGCGGTGATTCCTCTTGTGTCATCACTCCACCCCCTATTTTGGAAGGCCGT GGCGTTTCTAAGCGCTTTGGAAACAAGGCTCTTGTGCTCCCAATGCATTCAGGTAGTTAGTTCTGTTGAGTTACTCAAAC CCCTCTTCATTATGGAAAGGGGTTTGAAGTTATGGCAACATGTAATGTAATTGCCTAAACATTTCGTCACTGGTTCAATT CCTAGTGGCTTAAACTTTGTTGAACTTTGAAAGCTTTGATTTGATGTTAATTTTGGAGTTTATTGTTTATATGAGCAGAT TGGTTTTCACCGGCCACCGTGCATAGGCTAGAGAGACAGGCGGTGCCCCATTTCTTTTCTGGGAAATCGGCGGATCATAC GCCAGAGAAGTACATGGAATGTAGGAATTGCATTGTTGCACTGTACATGGAGGATCTGGGGAAGAGGATTACTGTCGCTG ACTGCCAAGGATTGGTGGTTGGGGTTGATCAAGAAGATCTGGCTAGAATTGTCCGGTTTCTTGATCACTGGGGAATTATC AATTACTGTGCTCGGACGCCTGAGCTTCCGAATGCTGTGTCCAGCCTGAAGGAAGACACGGGTGGAGAGGTCCGTGTGCC GTCTGAGGCTTTGAAATCCATTGATAGTTTGATCAAATTTGACAATCCGAAGTGTAAGCTCAAAGCAGATGAAATTTATT CATCATTGACAATGCATAATGCTGATTCCCCTGATCTTGACGACAGAATAAGAGAGCATTTGTCTGAAAATCATTGCAAT TATTGCTCTCGTCCTCTTCCTGTAGTATACTATCAGTCTCAAAAAGAGGTACACTGGATTTTTTTGTTTTAAATTTAATA ACATATCAAGGTCCTGTTGTCGACTGCTTTTGTCATTTAGGTAACATACTTATGAAAAGATGACTAGGAACTAGGAAGTG CTTCAGTTATTGAATAACACCATATGACCTGGCATGAACATGGAGCTTCCATAACATTGAATGTTTAGTGCATATTGTTG TGGGAGTTAAAACTCATGTAGTTGAAAGATTAATGGTTACTCCATGCCTTAACCATTTCTATAAATAGCAACTCACTCTC TTTCTTTTAAAACTGGTTAGTAAAATCAAAATTAAAAATCTAGAAAATGGATTACAATTGCTGACAGTGCGTTACTATTT CTGGAAATGTTGTATTTATCCTAGCATTCTGAGTATCTCCCTTTACTCAAGGTCAATACATAAACAAAACGGAGGATAAA ACAAAACAACTGAGATTTGGTATGTGATGAGTATAGGCCTCCAATCAAGAAGGTGTATGAGAGAAAGAACAAGGGGAAAG CCACAGCTTAATGTGTTTGTTATAGTTAGTTAGTATCCAGCTGGCAAGTTAGTTGTTTCTGTTAGTGGCCAGCTGGCAAT TTCTGTTAGAGATGCATTCTGTTAGCATCTGGGAGATAGTATAAATAAAGGGAAGGGGGTAGTTAACGAGTAGTTATTCA GTTAGTAGGTAATTGTGGAGAGACTGGTCTCTCGAACAACCAGAGGAAGAACTAGGGTTCATTCCACCATTTCTGTACCT TGAGCTCTGGTTCTCATTGAGAATCTGAGTCTCTATTTTCATTCAAATTCAATCTAGTTTCAGTTCAGAGTTCTATAGTG TTCATCAATTGGTATCAGAGCTCCATCCAGGAGCTGTGGTATCGATCTATGGTAGCTAGCAGAATGGAATCTCGAGTTGA TGCGATCGAGAGGTTTATCGAGGCTATGAATCGCGACAGGGAAGAAGAGCGCAGGAACCGCGACGAAGAACGACGAAATC GAGAGGAAGATCGCAGAGAGCGTGCGGCGGAGAGAGAGCGTGTAGAGGAGCGACTTCGCACCTTGGAAGCGATTGTAGAA TCGCTGTCCAGGAAGTTCGACGGCGAACGCGATGACGGAGGCAGCGGCGGGCGAGATCGCCGGCAAATAGGGGAAGAGCG AACGGTGAATGGTGGCAGCGTGGGAGGCCAGAGAGTAGAACACGAAGAGGAGAGAACACCGCGCACCGAGAATCCGCAAG CGGAGCGGTGGCGGAAGCTTGATATTCCGGTGTTCCAAGGAGAAGAAGATGCGTACAGTTGGATTCAGAAGTTGGAGAGA TACTTCCGATTGAAGGGAGCGAAAGAGGAAGAGAAGACGCAAGCTATCATGGTGGCTCTTGATGGAAGGGCGTTGAGTTG GTACCAATGGTGGGAGACTTGTAATCAGGTAACTACGTGGGACAAGTTCAAGGAAGCGTTGCTGGAACGTTTCCAACTCT CATATGCTTCAAGTCCTTTTGCTGCGTTGCTAGCTCTTAAGCAAGAAGGAAGTGTAGAGGAATTTGTGGCTCAATTTGAG AGATTTGCAGGCATGTTGCGAGGGGTTGAAGAAGAACACTACATGGACATTTTTGTCAATGGACTCAAGGAAGAGATTGC AGCAGAAATCAAGCTCTATGAGCCTAGAACTCTAGCAATCATGGTCAAGAAAGCATTGATGGTGGAACAGAAGAACCTGG CTGTGAGTAAAGCAGGGGTTGGCAGCATTAGCAGGTACAATTCTTCTTACAAACCACCTTTTAAAGCTTCAACTTATCAG AAAACTGTGACAATTGATAGTGGACAGAAGAGTGGAGTAGGTAGTGTTGTTCAAAACACAGTACAATCCTCTAGTGGAAG TGTTAGTGATAGAGTAGGGAGCAAGCCAGCAAGGGGAGGGGTTTTCAAAAGGCTTACTGGGGAAGAAATGAAGGAGAAAC TAAGGAAAGGGGAATGTTTTAGGTGTGATGAGAAATTTGGCCCAAACCATGTGTGTAAGAATAAGCAACTCAGAGTCATG TTGCTGGAGGAGGAAGGTGAGGAAGAAGAAGAGGAGACTATAGAGGCTCAGCCAGAAGATTCAGGAGAAATTATGGAGTA TAAGCAACTATCACTCAACAGCATACAAGGACTCTCTACCAGGAAATCACTTAAGGTGTGGGGAAAATTGCAGGAAACTA CTATTGTTGTGCTCATAGATTGTGGAGCAACACACAACTTTATTTCAGCTACTTTGGCAAGAGCTTTGGAACTAAAGATT ACTGAAACTTCCTCTTATACAGTGGAAGTTGGAGATGGACATAAGGTGCAAGGTAGAGGGGTTTGCAAGAATGTTAGTGT GCAGATCCAAGGGTTCATGGTAACACAAGACTTCTACTTGTTTGGGTTGAGAGGTGTAGATGTTGTGCTGGGTTTGGAAT GGCTTGCAAGCCTAGGGGATATAAAGGCCAATTTTGAAGAGCTCACCTTGAAGTTCAAGCTGGGGAACAGCAAAGTGGTA CTCAAGGGTGAACCTGAGCTGTTGAGGAAAGGTGCCTCACTGAATGCAATGGTCAAAGCCATTCAGCAACAGGGTGAGGG GTATGTTCTGCAATGCCAGATGTTAGAAAAGGAAGTGGCCCAACCAGAAGACACTCCAGAGTTATTAAAAGCAGTCTTGG CAGATTTTCCAGCATTGTTTGCTTCACCAACTGAACTGCCACCTCAAAGAAGACATGACCATGCAATACATTTGAAGGAA GGGGCATCTATACCTAACATTAGACCCTACAGGTATCCCCATTTTCAGAAAAATGAGATAGAAAAATTAGTTGCTGAAAT GCTTAATGCAGGCATCATTAGACCAAGTATTAGCCCTTATTCAAGTCCAGTCATATTGGTGAGGAAAAAGGATGGTAGCT GGAGGTTTTGTGTAGACTATAGGGCCTTGAACAAGGTCACGATCCCCAATAAATTTCCTATCCCAGTTATTGATGAACTA TTAGATGAGATTGGTCCAGCAAAGGTGTTCTCCAAGATAGATCTTAAATCAGGTTACCATCAAATTTTGATGAAGGCTGA AGATGTAGAAAAGACAGCATTTAGGACACACGAGGGGCACTATGAGTTTTTGGTGATGCCATTTGGCCTCACCAATGCTC CCTCCACATTTCAGTCCTTAATGAATGAGGTGTTGAGGCCAGTTTTGAGGAAGCATGCACTAGTCTTTTTTGATGATATT TTGATCTTTAGCTTGACCATGGAAGACCATGCAGTACACTTGACACAAGTACTGCAGCTTAATAGAGATAATGAAGTGGT AACTCAAAGAAGTCCCACATTGCCAAGATTAGCAAGTGCACAAGTGCATATATAATAAAGAACGCACACACCCATTGCCT TAAGCCTAAGGTTTTGTGGTGTTGTGTGGTTCTAACTTAGGATTTCTAACATGGTATCAGAGCTGGTCTGATCCAAGCCA TGACTTCCGCTTCCAAAAAAAAAAAAAAAAAAAAAAACCGGAAAAAAAAAAAGTAAAAATCCGAGAAAAAAAAAAGCAAA AATGGCAGTCCCATTTGCGCAAGCCAAGGCCTCAGACTCAGACGAAGGAGCACAAGTCCAAGGAACTCCGATGCTCCCGC TAGAGTACTAGCCCAGACAAAGAAAGTCGAAAGGCAGACTCAGACGAAGGAGCACAAGTCCGACGACCACTGATGTTCCC GCTGGAGTGCAAGGCACAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATGGAGTCCCAATTGAGGGGGAGTAATAGAGA TAATGAAGTGGTAACTCAAAGAAGTCCCACATTGCCAAGATTAGCAAGTGCACAAGTGCATATATAATAAAGAACGCACA CACCCATTGCCTTAAGCCTAAGGTTTTGTGGTGTTGTGTGGTTCTAACTGTTAGAACCACACAACACCACAAAACCTTAG GCTTAAGGCAATGGGTGTGTGCGTTCTTTATTATATATGCACTTGTGCACTTGCTAATCTTGGCAATGTGGGACTTCTTT GAGTTACCACTTCATTATCTCTATTACAGCTAATGGAACAACATGACTTAAAAATCAATGGCAAGAAGAGTGTGTTTGGA AGAGGGCAAATAGAGTATTTAGGCCATGTTTTGACTGCTGGAGCAGTGGCGGCAGATCCAAAGAAGCTGGAAGCTATGTG GATGTGGCCAATTCCAAAGGATTTGAAAAGCTTGAGAGGGTTCCTTGGGCTGACTGGATACTATAGAAGGTTTGTTAGAG ACTATGGAAAAATAGCTAGGCCATTAACACAGCTCTTGAAGAAAGATAGTTTTCAGTGGGGACCAGGCCCTCAGCAAGCT TTTGAAGCCCTCAAGCAAGCTCTCACTGAATTACCCACCCTAGCTGTTCCTGATTTTTCAAAGGTTTTTGTATTAGAAAC AGATGCTTCTGGTACAGGGTTGGGAGCAGTGTTGTCTCAGGAAGGAAAGCCCTTGGCATTTTGGAGTGCTACACTCTCAG ATAGGAGCCAAGCTAAGTCAGTAAATGAGAGAGAATTAATGGCAGTGGTTAGAGCCGTCCAAAGATGGAGACATTACCTT ATGGGGAGGCACTTCATCATTAGGACAGATCAGAAAAGTTTGAAATTTTTGACTGAGCAGAAGGTCTTGGGAGCAGAACA GTTCAAGTGGATTTCTAAGCTCTCAGGTTATGATTTTGAAATACAATACAAACCTGGAAAGGACAACTCTGCAGCTGATG CCATGTCTAGGAGAAGTTCTTACTGTGCACTCTCAGTCCTCAAGGTTAATGACTATGAGGAATGGCAAACTGAAATGTTA CAGGATCCTAAATTGCAAGCAATAGTGCAGGATCTGATTCTGGATCCAGAAGCTCACAAAGGCTACTCTCTAAGAGACCA CAAGCTGTTCTACAAAGGGAAGCTGGTGCTGTCCAAGCAATCCTCTAGGATTCCCATTTTGTGTAAGGAATTCCATGCTA CCTTGTTGGGGGGGCATTCTGGTTTTTTCAGAACTTATAGGCGGTTGGCTGCAGTGGTCTATTGGGAGGGCATGAAGAAA GACATTAAGGACTATGTAGCTGGCTGTGACACTTGCCAGAGGAATAAATTTGACAATTTATCCCCAGCAGGTCTCCTTCA GCCATTGCCAATTCCTACACAAGTATGGACCGATGTGTCTATGGATTTTATTGGTGGTCTACCTAAATCCAAGGGCAAGG ATAAAATCCTAGTGGTGGTGGACAGGTTGACTAAATATGCCCATTTTATTCCATTAAGCCATCCCTTCACAGCTCCTGAG GTAGCAGCTTTGTTTTTGCAAGAAATTGTGAGACTACATGGGTTCCCTGCAACAATAGTCTCAGATAGGGATTCTCTGTT TCTCAGCAGCTTTTGGAAAGAATTATTTCGAGTTTCTGGTACCCAGTTGAGGTTCAGTACTGCCTACCATCCTCAAACTG ATGGTCAGACTGAAGTGGTAAATAGATGCTTAGAGGTCTACTTGAGGTGTCTTACTGGTTCCCGACCAAAGAAATGGGTC ACTTGTCTACCTTGGGCTGAGTTCTGGTTCAACAGCAATTATAATAGGTCTACTAAGATGTCTCCTTTTCAAGCCCTTTA TGGTAGGGAACCACCACTGCTACTACAGGGCACTACAATTCCCTCCAACATTGCTGCAGTGAATGAATTGCAGGAGGGTA GGGATGAGTTGATAGCTGATCTCAGGGCTAACCTTCTGAAGTCCCAAGATATGATGAGAACCTATGCTAATAAGCATCGA AGGGATGTGGAATACCAGATTGGGGACTTGGTTTACCTTAAGTTGCAGCCTTATAGAAGACGGTCTTTGGCTAGGAAACT GAATGAAAAGCTGCGTCCTAGATATTATGGTCCTTATCCTATTGCAGCTAAAATTGGAGCAGTAGCTTACAAATTGGACT TACCAGCCCATAGTAGGGTGCACCCTGTCTTTCATGTCTCTCTCTTAAAGAAGGCCATAGGGACTGATTTTCAAGCTCAA CCTTTACCTGAGGTTTTGAATGAGGACCATGAGCTGGTCGCTGAACCTGAAGCTGTAGTGGCTGTTCGGGAGGATACTAT GGGGCACATTGAGGTGTTGATTCCGTGGACTTCTCTACCTGCTTGTGAGAATAGTTGGGAATCTGCTGCTCAGCTCCATG AAGCTTTCCCCACTTTTCCCCTTGAGGACAAGGTGAAGCTTTTAGGGGGGGGGGTATTGATGAGTATAGGCCTCCAATCA AGAAGGTGTATGAGAGAAAGAACAAGGGGAAAGCCACAGCTTAATGTGTTTGTTATAGTTAGTTAGTATCCAGCTGGCAA GTTAGTTGTTTCTGTTAGTGGCCAGCTGGCAATTTCTGTTAGAGATGCATTCTGTTAGCATCTGGGAGATAGTATAAATA AAGGGAAGGGGGTAGTTAACGAGTAGTTATTCAGTTAGTAGGTAATTGTGGAGAGACTGGTCTCTCGAACAACCAGAGGA AGAACTAGGGTTCATTCCACCATTTCTGTACCTTGAGCTCTGGTTCTCATTGAGAATCTGAGTCTCTATTTTCATTCAAA TTCAATCTAGTTTCAGTTCAGAGTTCTATAGTGTTCATCAGTATGCCATCTGACGGTGCATCTAGTGCATACTGTGCAGA TGGTTTGTTGCTAAGTGTGTGTTTGGTTTCAAATCTGGAGAGGCCAAACGTGGATCCAGAAATTCAAAAGCAACTATTTC TTACTTCTGAAAACGTGGATTGGGGCCAAACGTAGATCCTGGATGAGTTTTCCAAACACACACTAAATCTTGGCTCTGTG GTTTTGTTTATTATGCTTGCTTAGTAGAAATCAACCCCTACATAGTCAGTATCAGTAAGAAATTACTGAATTGCTTAGGT TGTTGTATTTGGCATATGTGAAAGTTTATTTATCAATTATAGCACTGATGTGAGACTATTTTGTATTATAGGACCAATGC ATCAAAAGGACATTTTAGAATTCTTGTAGGAGTCTTGTTATGTTAGTAGTGTTGGGCTTGTACTAGTTGTACAAAGTTCG TACTTGACCTAGAATATTAATATAAATAGGATTATCAGGTCACTGTTTCTGCTTTACACATGTCCTCTCATCTCATTAAT AATACTTTCTTTCCAAACATTTACTCTTTTCGATCTTTAACCTCATTCAATCTTTTCCCTCATAATTTCCATAAGTAATT TTTTTATAAAAGGAACTTCTATTTTTCCAGGATATAAAGAAGTTTTTAAAAAGAAAGGAGAGAATGTACAACTAGTGGAA AATAATTAAACCTTACCACAGTGAGCCAAACTGGCCTAAACGTGTAATACAAGTTGTTCAATTTCTCTGCACATCTCTGG TGAAGACCCCGTGAAATAACCTTGAGCGAGGAAACACAGAGAGGTTATAAACTGATAGAAACTGGATCAGAATATAGGAA GAAAATGTGTTTATTAACAAGAAATTTGTTGGTACAGCCAGGTAGTTGAGACACCTTGTTCTCTCCCACTCTAGATCCTT TTCTAAAACAAAAGATATGCTTCTCTAAACTTTTAAACTTCCTCCCTCTCCATAATTTCAGCAATGACTTGGGGTGCCCT ATGAGTAATGCATGGATGTCAAGTCTGCATGTTAGTGAGCTATTCCATGAGCTGAACCAGTAGTAACTCTGATAAATAAA CTTCTATTCCACCAGCTGCATCATTAAATTAAAAGATAATCCCTTTCAAACTCCCAACACCTCCTAATGGTTCGGTCTTG GCCCATTAGGTCAAAAGTGAGCTCAATGGTTGTAATTCCATTCTTGTCCTCCCTTGCCATGCTTTTCATGTACACGTTCC CTTACCGTCGTTGCCGTATCTGCCAACGCACTATCTAGCACCTTTCTATCAGCCATTGCATCAAAAGCTAAATCTGGCAG CTCTGGTGGTTGTTGCTTGTCCAGTCTGCTTTGCTTTCTTCCTGCCTCTCCGCTTGATTCGTCAAGAGTTTAGCTGATTT GGAGTTTTGCAGACTGCAACAGCGACTAGCTTCATCGTTGTGTCTTCCACTGCAGTAACTCGATCACCATGCGCGTGTTA CAGTTCCTTCACTCTGTCAGGGAGGATTTGATCGGCAGACTCAATAACCAGAGCTTAATTGCCACGCATGACCTGTTTCC CTCTTTGGACTAATTCAAAGCGAAGTTTGGTTGCTTTATGTCGCCCAGAGGTTTCTGAGTTTCGGAGTTATATTGCGCTG GTGTGATATAAGTCATGCTGTAGAAACAAAAATATAAAGGTGGCGATAACGAAATATCTGTTGTCCTTTGTACTGGTGAG CTGTCAGCTTCATCAAGATTAACTATTGAAACATTCTATTACCATTCCTTATTTGGGATGCACTTCTGAATAAAAGTAGC ATATAGGAGCCCATAGGAATGGAACAAACAAAATTGAAATAGAGTTCAAGAAAGACAAGAAACTAGAAATCAGCTTTTAC CAGTTATTAGCTCCTAGCCTTTTGCTAGTTTTTTTTGTGCAAAATCAAAGTCCATTCCACTCTTTGTTAAAGGCCTAACT TAAATTTTCTTTTTAAATGCTTTCCTATTTCTCTTCAACTAAAGGTAAACAACTCATTATCTTCCACGTATTTCCAACTT CGTCCTCCTTTTCACTAATGCAATCCCATTATTTAATTTATATTTAATCTTAACACATCAAATGCTCAAAAACATGTCAT TATGTCAATGACTTTTTGATAGCATGTTATTTCGAAGTTAATAGAGAGTATTTTGTTATGAACTTGAAAACAGAGTCTGA GATTTCAATAAAATGCTGAGAAGGCAGAGAAGAGAGAAGGTACAAGAATGCTTTTGTGTTAGTAGATTGAGAAACAAACA GAAAAAAGAAGAGGATTCTTCTTCCAGGGGTTTCCCCTTCAACAAAGATTTCTCCTTTTACAATTGAGCAAGTACTCTGT TCTCCAATATTAACAATTCAGAATGAAACCTCTTCTACCCCCTTCTTGCTATTTAACCTAGGTGGAAATTGGGGATTTCT CTTGCATGAGTACTCTTGTTGGTCACCTCCCCACATTTAGTCTGGATCATCTCCCCATCCTTATCCGCTTGTTCATCATC TGTCATGATTTTAACCTTTCTTGGCATTGGTGCATAGTACGGGGAATGGTTAGCCACACTCAAAGCATCTGTACCTGCTC CTACTATTTAAGCTAACCACCTAAGTAATTCCATAGCTAATCTTCGCCACCCAACTAATTCTTTTACTACATACTGCTTT GCCTTGGCTTTTTTCATTTTTGTTGACTGGGTCTGTTAACACTATAGTATGTTTGCTGCTGTTATTACTTGTATTGAAAT TAATCTCTTATTCAGACTTCAATGGAGCATCTGTCTTTTAACCCTAATAATGACTAAGCTGTGTTGGGTGAAAAATGCTA ACTATTTTTTCTGTGTGTGTGAGAGAGAGAGAGACAGAGAGAGCAACAGAGTGCTTGACTAATGCAGAGTATTTCAAGTT TTACGCAAACTAATGTAAATTTTAAGTGTTGCTTTATCTGATGAACTATACTAAAAATTTGTAAACTATGGATATATTAT GATGACCCATGTCTAAACTAAATAGGCTGCAGAAAAACTTTTGTTGCTTTTGAATCATATTTAATTAACATTTTATGTTA CAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGGAGATTTGTCATTGGTCATTCAAGTATAGATTTTATGAG GGTGGATTCAACAAGAGATTATGGTGAACTAGATTGGGAAAGTTGGACTGATCAAGAAACTTTGTTGCTGCTTGAAGCAA TGGAGATTTACAATGAGAATTGGAATGAAATTGCGGAGCATGTTGGTACCAAGTCAAAAGCACAATGCATTCTTCATTTT CTTCGTCTACCCATGGAGGATGGAAAATTGGAAAATATCAATGTTCCAAGCATGTCTTTATCATCCAGTGTCATGAATAG AGATGATAATGGAAGATTGCATCATCATTTAAATGGGGATTCTGCTGGTATGTCTTACATTTTTAAACCAAATTGTTGTG ATATGTTTTGATTTCATATCCATTCTCTCACAGGACCCATCCATCAAAGCCGAGAGTCTGACAGCCGTCTGCCTTTTGCA AATTCTGGAAATCCTGTTATGGCTCTGGTAGGTGGTTGCTAATAATATCCCTAAGGAAAGTTATTAGTTAAGGGTGCACT TGAAAACATGTTTATAAATAAGCCTAGGATTCTGCACCTAATATCTTGTTCTTAACTTATTTATTCAAAATTATTTTAAG AACACTTATTTCTTCAAGTTGTGTTACTTCTCTTTGAGAGATAGAGTTTATTGATCATCACACTTGATTAACAAAAGCTT TAAAAGGTTGATCTGATGATGAGATTTATTTAGATACTGTCCCAGAGTTCCACAACAAATTAAATTGTCTTTTATTTTCT GCTGTTCTTTTGATGAGATTTTTTTCACATCTGATTTTGGTTTGTTTTTCTATAAAGGTTTCCTTTTTAGCCTCTGCCGT TGGACCAAGAGTAGCTGCGTCTTGTGCTCATGCAGCATTAGCAGTATTGTCAGAGGATGGTTCTGGCAGTACATCACAGA CAGAAGCACCAGGACACGATAATAGGTTAGTATGATCGTCAAAACACATGTTGTTTTACCAGATGAATTGTTTTCTCCTG GGTTATTCCTCATTCCTTTGTACATATCTTCTGCTTTATACATTTTTTTTCTCTATTATTATTATTATTATTTTCCATTT ACAAAAAATATTATTAATATTAATTTTTAAAAATCTTATACGGAATGGTTGAACCTTACGTAAAACAGATCACGATCTTC TGCAGATGAAAAAGCAACTGCAGAGATCTCAAGCATTGAAATGTATTTTAAATTAAGTAAATTAATAATAATTAAATTAT TTAAATAAATTTTAGTGGTGAGATCATGAACTGCACACCCTGCAGCTAGTTTTTTAACTCTAGAGGATCCTCATCCACCT AAAACACACCCTAAAGGAAAAAGGGAAGCCAGCATTTATTAAGTTGTTTGTCCTATTGCTATTGTAGAATTTTATGGGTT GCTAGAGTGAGAAAGGCAACCTTGGTTGCTAGTTTATGAATTTTGTACTAAAAATTAGTAGTTTTCACCCATGAAGGACA AATGCAGAAAGCGTTCATGCTAGAGATGGTGGCCCTCATGGAGAAACTGCAAATTCAATTAATCATAATGGTCAGTTATG GTTGCTGTCTTTTTATGTTGCTGATATCCAATAATCCCTTCAACCTCCAATAAGACCTATTATATGTAGTTTTCTTCTTG AGATATACTGCTTTTGATTTCAGAGGATAAGGCAAAAATGCGTAGTACACGGGGTCAAAGTGAAGGTCGGACAACCCCAC TCTCTGCTGAGAAAGTTAAAGATGCAGCTAAAGCAGGCCTCTCTGCGGCAGCAATGAAAGCTAAATTGTTTGCTGATCAC GAAGAACGTGAAATTCAGAGGTTATGCGCCAATATAGTTAATCATCAGGTATACCTGTTGTTTTTTGATATCTAGTTGAT TCAATTAAAATATCAATATACTTCATTGCTCCCTTTTTATTTCTATTTGATCCTTTGCATGTGTTATGCATACATACCAG ATAAACTTATTTTGCAGTAGTCAGTAAATTAAGCACTTGGAGAAAATTTTAAATCAGGTGCTGATATAGTAATTTGATGA GTTTAACTTAGTTACTTGCTGTTTTTGACAGTTGAAAAGACTGGAATTGAAGCTGAAACAGTTTGCAGAAATTGAAACAT TACTGATGAAAGAATGTGAACAAGTAGAAAGGGCAAAGCAGAGGTTTGGTGCTGAACGGTCTCGCATTATATCGGCACAT TTTGGAACTGCAGGAGCCACACCTCCAATGAATGCATCAGGTGTTGGTCCTTCAGTGGCTAGTAATAATGGCAACAATAG GCAACAAATTGCTTCTCCCTCACAGCCCAGCATCTCAGGGTATGGCAACAGCCAACCGGTTCATCCACATATGTCCTTTG CCCCGCGACCTTCAATGTTTGGGTTGGGGCAAAGATTGCCCCTGTCTATGATACAACAATCACAATCAGCAGCTTCTTCA ACTGGCATGTTCAATGCTCCTAGTAATGTGCAATCGAGTACCAATCACCCATTGTTGAGGCCTGTGTCAGGAACTAACTC AGGTTTAGGTTAATTAGAAGAGTAGATGTAAGTTTTGAAACTTCAATTGTGCAATTTAATTTGGTCATTGATTTCAGAAG TGAAGAGGAAATTAGGTGGATGTGTCAAGAAAGTTACTTAGAGAGCCTGTAATTTGTTGCAGTTGATTGTTTCTGTTTCT TAAAAGAAAATAAGTAGAATTTAATGTTCCATAGTTCTATTCTTTCCTGTGAAGTTTAGGTACCATGAAAGTTTATTGAT TTAGCTTTTCAGTGACACCAATATTGTTTAGCTAGATTACACACTAGATTAACTACTTGGATGTTTCCACTGCCTGCTCC GTTGCATGATGTAGTCCACACCACTTGGTTTGGTTGTGTCCACGATTTTCTGATTCTAGTGAGTGTTCAGCATTTGCCTG CAAATAAGAAAATTTGAAACGTACGTCCTCTACTTAAATATCCTCTTGTAACAAAAAAAGTAAGCTAAATAAGATTATAC TAATCTTTTAAGTAAGCTTTTTTTTTTTTTTTGAAATAGTGCAATTTACTTTTAATATAATGAATTTAGTGCAG
CDS sequence (LotjaGi1g1v0264000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGCTTCCCCTTCAGAAAACCGAACCAAATGGAGGAAGCGGAAGCGGGACTCCCAAATCAGCCGCCGGAAGCACCA CGAGGACGACGACGACGACGACGAGGAAAACCCCAACGCGGCGGAGGACGACCACCACGACTACGACGACTCCGAGGACC ACAACCACAACCACAACCACCCTAATTCCCAACCGCACCACCACGAGATGGAGGTTCTGTCAGATCACCCGGTCCAGATT TCGGTGTTCCCGTTGGTGGTGAAGCGCACCGTCAACCGCCCTCACTCCTCCGTCGCCGCAATCGTGGCTCTTGAACGAGC TATTGAGTTGGGAGATAGTGGCAGCAACAGCAACAAGGGTCAGGTGCAGAACCCTACTCCGTTGCTGGAGAATGTGTCAT ACGGCCAGCTTCAGGCGCTCTCCGCCGTGCCCTCTGATAGCTCCGCTTTCGATCAGGACCGCGGTGATTCCTCTTGTGTC ATCACTCCACCCCCTATTTTGGAAGGCCGTGGCGTTTCTAAGCGCTTTGGAAACAAGGCTCTTGTGCTCCCAATGCATTC AGATTGGTTTTCACCGGCCACCGTGCATAGGCTAGAGAGACAGGCGGTGCCCCATTTCTTTTCTGGGAAATCGGCGGATC ATACGCCAGAGAAGTACATGGAATGTAGGAATTGCATTGTTGCACTGTACATGGAGGATCTGGGGAAGAGGATTACTGTC GCTGACTGCCAAGGATTGGTGGTTGGGGTTGATCAAGAAGATCTGGCTAGAATTGTCCGGTTTCTTGATCACTGGGGAAT TATCAATTACTGTGCTCGGACGCCTGAGCTTCCGAATGCTGTGTCCAGCCTGAAGGAAGACACGGGTGGAGAGGTCCGTG TGCCGTCTGAGGCTTTGAAATCCATTGATAGTTTGATCAAATTTGACAATCCGAAGTGTAAGCTCAAAGCAGATGAAATT TATTCATCATTGACAATGCATAATGCTGATTCCCCTGATCTTGACGACAGAATAAGAGAGCATTTGTCTGAAAATCATTG CAATTATTGCTCTCGTCCTCTTCCTGTAGTATACTATCAGTCTCAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCT TTCATGATGGGAGATTTGTCATTGGTCATTCAAGTATAGATTTTATGAGGGTGGATTCAACAAGAGATTATGGTGAACTA GATTGGGAAAGTTGGACTGATCAAGAAACTTTGTTGCTGCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAAT TGCGGAGCATGTTGGTACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTTCGTCTACCCATGGAGGATGGAAAATTGG AAAATATCAATGTTCCAAGCATGTCTTTATCATCCAGTGTCATGAATAGAGATGATAATGGAAGATTGCATCATCATTTA AATGGGGATTCTGCTGGACCCATCCATCAAAGCCGAGAGTCTGACAGCCGTCTGCCTTTTGCAAATTCTGGAAATCCTGT TATGGCTCTGGTTTCCTTTTTAGCCTCTGCCGTTGGACCAAGAGTAGCTGCGTCTTGTGCTCATGCAGCATTAGCAGTAT TGTCAGAGGATGGTTCTGGCAGTACATCACAGACAGAAGCACCAGGACACGATAATAGGACAAATGCAGAAAGCGTTCAT GCTAGAGATGGTGGCCCTCATGGAGAAACTGCAAATTCAATTAATCATAATGAGGATAAGGCAAAAATGCGTAGTACACG GGGTCAAAGTGAAGGTCGGACAACCCCACTCTCTGCTGAGAAAGTTAAAGATGCAGCTAAAGCAGGCCTCTCTGCGGCAG CAATGAAAGCTAAATTGTTTGCTGATCACGAAGAACGTGAAATTCAGAGGTTATGCGCCAATATAGTTAATCATCAGTTG AAAAGACTGGAATTGAAGCTGAAACAGTTTGCAGAAATTGAAACATTACTGATGAAAGAATGTGAACAAGTAGAAAGGGC AAAGCAGAGGTTTGGTGCTGAACGGTCTCGCATTATATCGGCACATTTTGGAACTGCAGGAGCCACACCTCCAATGAATG CATCAGGTGTTGGTCCTTCAGTGGCTAGTAATAATGGCAACAATAGGCAACAAATTGCTTCTCCCTCACAGCCCAGCATC TCAGGGTATGGCAACAGCCAACCGGTTCATCCACATATGTCCTTTGCCCCGCGACCTTCAATGTTTGGGTTGGGGCAAAG ATTGCCCCTGTCTATGATACAACAATCACAATCAGCAGCTTCTTCAACTGGCATGTTCAATGCTCCTAGTAATGTGCAAT CGAGTACCAATCACCCATTGTTGAGGCCTGTGTCAGGAACTAACTCAGGTTTAGGTTAA
Protein sequence (LotjaGi1g1v0264000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPASPSENRTKWRKRKRDSQISRRKHHEDDDDDDEENPNAAEDDHHDYDDSEDHNHNHNHPNSQPHHHEMEVLSDHPVQI SVFPLVVKRTVNRPHSSVAAIVALERAIELGDSGSNSNKGQVQNPTPLLENVSYGQLQALSAVPSDSSAFDQDRGDSSCV ITPPPILEGRGVSKRFGNKALVLPMHSDWFSPATVHRLERQAVPHFFSGKSADHTPEKYMECRNCIVALYMEDLGKRITV ADCQGLVVGVDQEDLARIVRFLDHWGIINYCARTPELPNAVSSLKEDTGGEVRVPSEALKSIDSLIKFDNPKCKLKADEI YSSLTMHNADSPDLDDRIREHLSENHCNYCSRPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSIDFMRVDSTRDYGEL DWESWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSLSSSVMNRDDNGRLHHHL NGDSAGPIHQSRESDSRLPFANSGNPVMALVSFLASAVGPRVAASCAHAALAVLSEDGSGSTSQTEAPGHDNRTNAESVH ARDGGPHGETANSINHNEDKAKMRSTRGQSEGRTTPLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQL KRLELKLKQFAEIETLLMKECEQVERAKQRFGAERSRIISAHFGTAGATPPMNASGVGPSVASNNGNNRQQIASPSQPSI SGYGNSQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSAASSTGMFNAPSNVQSSTNHPLLRPVSGTNSGLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 68 | 68 | - | – | |
| PANTHER | 5 | 790 | 786 | 0.0 | – | |
| PANTHER | 5 | 790 | 786 | 0.0 | – | |
| MobiDBLite | 41 | 68 | 28 | - | – | |
| ProSiteProfiles | 181 | 279 | 99 | 19.537 | ||
| SUPERFAMILY | 181 | 275 | 95 | 3.14E-22 | ||
| Pfam | 185 | 270 | 86 | 1.0E-21 | ||
| Gene3D | 187 | 274 | 88 | 2.5E-26 | ||
| ProSiteProfiles | 400 | 451 | 52 | 20.849 | ||
| SMART | 401 | 449 | 49 | 2.9E-9 | ||
| Gene3D | 402 | 451 | 50 | 7.1E-24 | – | |
| SUPERFAMILY | 403 | 455 | 53 | 2.32E-12 | ||
| CDD | 404 | 446 | 43 | 7.33098E-10 | ||
| Pfam | 404 | 446 | 43 | 1.8E-11 | ||
| MobiDBLite | 467 | 500 | 34 | - | – | |
| MobiDBLite | 536 | 602 | 67 | - | – | |
| MobiDBLite | 536 | 552 | 17 | - | – | |
| MobiDBLite | 573 | 587 | 15 | - | – | |
| Pfam | 608 | 681 | 74 | 1.7E-24 | ||
| Coils | 621 | 641 | 21 | - | – | |
| MobiDBLite | 684 | 740 | 57 | - | – | |
| MobiDBLite | 696 | 728 | 33 | - | – | |
| MobiDBLite | 753 | 792 | 40 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0264000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…