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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0285300 |
| Transcript ID | LotjaGi1g1v0285300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | phosphatidylinositol 4-kinase gamma-like protein; TAIR: AT5G24240.1 phosphatidylinositol 4-kinase gamma-like protein; Swiss-Prot: sp|Q9FNF8|P4KG3_ARATH Phosphatidylinositol 4-kinase gamma 3; TrEMBL-Plants: tr|A0A0B2QD11|A0A0B2QD11_GLYSO Putative phosphatidylinositol 4-kinase type 2-beta; Found in the gene: LotjaGi1g1v0285300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69348946..69352659) extracted from Lotus japonicus Gifu genome v1.2.
CTTGTTTTACAAGCCATGGAGTCTACGCCTATAAATACCACCTCACTTTCTCACTCCCACTTCAAAACACTTGTCTCTTT TCTCTTTTCTCTTTTTTCTTCTGTACCTTCACGCGGTACTACTGACTCACTGAGTCAAGTCTATTTTCCCGGAAAATCGG CAACCTGAGAAAATGCCCGATTCTCGGAAAATCGATTCGCACAACAATGGCGCTTAGATTCTCCACTTTCTCCTTTCACC GTCATCCTACCTGAGCTTCTTCTTCTTCTTCTTCATTCTCTGTAAGCTTCTCGTTCACTCTGATTCTGATCGATCGTTAT TGTTAGTGTAGTTTGATTGATTTGAAGAAATTTCATGTAAACTATCTCATTTCTCTTTGCCTTTACTGATTTTCTGCTTT TTTGTATGTAAATTTCATGTAGTTTGTTTGATTGAATTCAATCTTCTCTGCTTGAAGAATTTTTTTCTTGCTTTCTGTAG GGTAACTGGCTCTGAGCTCTGATTGCTGGAGAGAAATTTCAATACATGTAGCATTAGATTAGGCTTTGATTTCTTGTTTA CTGCTTAGGCATAGGGATGCTATTGCAGTAACAGTAAAAGCAATTTGAAGTTGAAATAGAGATGTAAAGAGAAAAAAAAG TTTAGGGTTGCCATTTGGTGATTCTGATTCCCTTTTATGATGGGAGCATTTGGTTGTCAGATTCATAGCTTGTTTATTTT TGAGACAGCAAGGTATTGAACCTGAGAAATTGAGGATGGCTTGTTTGGCGCTTCGTCCGATGCACGAAGAAGCTTTTGGT GATTTTACCAGCTGTTTTAGTCATCATTTGCGGGACTCGATTTTGATTTACCTGACTGTTGGTGGATCCGTGGTTCCGAT GCATATTATGGAGACGGATTCGATAGCTTCGATGAAGCTGAGAATTCAAACGTTTAAAGGATTTTTTGTGAGGAAACAGA AGCTGGTTTTTGAAGGGAAGGAATTGGCTCGTGACAAATTGTGCGTCCGTGATTATGGTGTTTCGGATGGGAATGTGTTG CACCTGGTGCTTAGGCTTTCTGATCTTCAAGCTATTACTGTTAGGACTGAATGTGGAAAGGAGTTTGGGTTTTATGTCGG GAAGAAAAGGAATGTGGGTTATGTAAAGCAGCAGATTGCGAGGAAAGGGCAAGGGTTGTTGGATCTTGCAGATCAAGAAT TGGTGTGGGAGGGTGAGGCGCTTGAAGACCAGAGACTTATAGAGGACATCTGTAAGGACAACGATGCAGTAATTCACTTT TTGGTTAGGACATCAGATGCCAAAGTTACGACTAAACCAGTTGGGAAGGATTTTGAGTTATCAATTGAGGCATACACTGT GCCAAGTTTTAGTGCAGGCCAGTTAGGGTCAGTGTCAGTAACAAATAGGGCCCTGAAGAGGAATGAATTGACTAGAGAAT TTCTTTTGGAACCAATTGTTGTGAATCCCAAGATCAAAATTCCACAAGTGATCCAGGAGCTAATTAAGATTACTTCAGAG GGGTTAGAAAAAGGTGGTAAACCAATTCAATCATCAGAGGGATCTGGAGGGGCTTATCTCATGCAAGATTCACTCGGCTT GAAGTATGTTTCTGTTTTCAAGCCTATTGATGAGGAGCCGATGGCAATCAATAATCCTCGAGGCCTACCTCTCTCTGTGG ATGGTGAAGGGGGGTTAAAGAAAGGTACACGAGTAGGGCAAGGTGCGTTGAGAGAAGTTGCAGCTTACATTTTGGATCAT CCTAAGAAAGGACCCCGCTCATATCATAACAGTGATGAAAAGGGGTTTGCTGGAGTTCCTCCTACAGTCATGGTCAAATG CTTGCATAAAGGATTCCATCATCCTGAAGGTTACAATAGTGCTTCAGATAATGTTAAATTAGGATCACTTCAGATGTTTA TGAAGAATATTGGAAGTTGTGAAGACATGGGCCCTAGTGTATTTCCGGTGGAAGAGGTACACAAGATCTCTGTGCTGGAT ATCAGGTTGGCAAATGCAGATAGGCATGCTGGGAACATTTTAGTTGCCAAGGATGGTGAAAATGGCTCAACTGTGCTTAT TCCAATTGATCATGGCTATTGCTTACCTGAGAGTGTAAGTCTTCTAACACAATAAATGTACTGGTTGTAAGGATATTTTA AGCTGACGATACTAATTACTATGGTCAACTGTTCTGTGTGTTTCTTAAATCTACTTCTCAATCTTCTCTAGTTCAGAATA ACTGTTAAAATGCTATAACTTTCTTAGCTAAATTCTCTGCTTTATATTTTCCAGTGCTACTATTTGCAATGCTATGTGCT TAACTGATCTGTGTTATAGCTAATAATAAGATGTTAATATTTGTACTCAAATTGCTATAGGTTTTAGACTGGATGAAATG TAGAGTTTTTACTCAACTTTAGATTCTCTGGAGTCTGGACTCTGTATCTTCTGATTTTGATCTTGGTATTGATATTGATT ACTTCTGCATATGATTTTTCATTATTTGATGATCCCTTACCCCTGTTCAACCTCTATAATACCTTTTATAGAAACATGAC TTTCATTTTCAATGCCTGTCATTCAGATGTCAAAACCTTTTCTATAATCTCTAGTTGATTTTATCATTTTTTTTGGCAAT TGCTTCCATTCTCTGGTTGATTTTATTTCTGTTCTTCGTGATTATGTTATCAATACCTTCATTATAAAAATGGTTTTGCA AGGTTTCTAGGTCAGAATATGATTGGTCCGTGTGGAAACCACATTGAACACGTAGTTATTATCAACTCTTCTTTCTTGCT ATTCTTAAAGGAGTTAAATATATTCATGTTAATTTGAAGTTTGGTTTCCCTCTCCTTTTTCTTCTTCTTCATATGCTGTT TTTTTCTCCTATTTTGCAGTTTGAAGACTGCACTTTTGACTGGTTGTATTGGCCACAAGCCAAAGAGCCCTACTCCCCAG ATACCATTGAGTACATAAAATCTCTGGATGCTGAAGAAGATATCAAGCTTTTGAAGTTTCATGGATGGGAGCTTCCTCCT GAATGCGCCCGACTCCTTCGAATATCAACCATGCTTCTGAAGAAGGGTGCAGAGAAAGGACTCCCTCCTTTCACCATTGG GAGCATCATGTGTAGAGAAACACTGAAGAAAAAATCTGTCATTGAGCAAATTATTGAGGAAGCTGAGGAAGGTGCACTTC CTGGAACAAGCGAAGCTTCTTTTCTCGATCTTGTTTCAGTGATAATGGATAGCCATTTAGAAGAGCCATTCCCATGAGTA CTGAATACACATATTGCTTTTGTTAATAAAGATGGCGATAAAGTGATGACTCTCCATTCGGCTTCAAAATGGATCCCTTA CTATGGTATATATACTTAACTGTTGGTTAAAACTTCTTATGACCCACCAATCAAGAATTTTATTCTTGTATTGCAATATC CATTCCTTATGCATCTCAGATCACAAGGAATTTTTGTGCAGTTCCTCTGTGAATATAAAATTCTGAAAATAAAGGTTGTG GTTTCAATAAAAGAAATCGTTCCATGTTCTGCTGATGCTGGTTTTCTCTTAATATTTTGAATTCCTGTGAGGAGCACTGA TATTTTCTGCAGCTACCTAAGCCCTGCTTGACAGCAATGGAACTAGATGAATTAACATTGTTGGAAAGAATGGAAATGAT ACGATTTTTATTTTTGTGTGAAAATTGAAGAAGG
CDS sequence (LotjaGi1g1v0285300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTGTTTGGCGCTTCGTCCGATGCACGAAGAAGCTTTTGGTGATTTTACCAGCTGTTTTAGTCATCATTTGCGGGA CTCGATTTTGATTTACCTGACTGTTGGTGGATCCGTGGTTCCGATGCATATTATGGAGACGGATTCGATAGCTTCGATGA AGCTGAGAATTCAAACGTTTAAAGGATTTTTTGTGAGGAAACAGAAGCTGGTTTTTGAAGGGAAGGAATTGGCTCGTGAC AAATTGTGCGTCCGTGATTATGGTGTTTCGGATGGGAATGTGTTGCACCTGGTGCTTAGGCTTTCTGATCTTCAAGCTAT TACTGTTAGGACTGAATGTGGAAAGGAGTTTGGGTTTTATGTCGGGAAGAAAAGGAATGTGGGTTATGTAAAGCAGCAGA TTGCGAGGAAAGGGCAAGGGTTGTTGGATCTTGCAGATCAAGAATTGGTGTGGGAGGGTGAGGCGCTTGAAGACCAGAGA CTTATAGAGGACATCTGTAAGGACAACGATGCAGTAATTCACTTTTTGGTTAGGACATCAGATGCCAAAGTTACGACTAA ACCAGTTGGGAAGGATTTTGAGTTATCAATTGAGGCATACACTGTGCCAAGTTTTAGTGCAGGCCAGTTAGGGTCAGTGT CAGTAACAAATAGGGCCCTGAAGAGGAATGAATTGACTAGAGAATTTCTTTTGGAACCAATTGTTGTGAATCCCAAGATC AAAATTCCACAAGTGATCCAGGAGCTAATTAAGATTACTTCAGAGGGGTTAGAAAAAGGTGGTAAACCAATTCAATCATC AGAGGGATCTGGAGGGGCTTATCTCATGCAAGATTCACTCGGCTTGAAGTATGTTTCTGTTTTCAAGCCTATTGATGAGG AGCCGATGGCAATCAATAATCCTCGAGGCCTACCTCTCTCTGTGGATGGTGAAGGGGGGTTAAAGAAAGGTACACGAGTA GGGCAAGGTGCGTTGAGAGAAGTTGCAGCTTACATTTTGGATCATCCTAAGAAAGGACCCCGCTCATATCATAACAGTGA TGAAAAGGGGTTTGCTGGAGTTCCTCCTACAGTCATGGTCAAATGCTTGCATAAAGGATTCCATCATCCTGAAGGTTACA ATAGTGCTTCAGATAATGTTAAATTAGGATCACTTCAGATGTTTATGAAGAATATTGGAAGTTGTGAAGACATGGGCCCT AGTGTATTTCCGGTGGAAGAGGTACACAAGATCTCTGTGCTGGATATCAGGTTGGCAAATGCAGATAGGCATGCTGGGAA CATTTTAGTTGCCAAGGATGGTGAAAATGGCTCAACTGTGCTTATTCCAATTGATCATGGCTATTGCTTACCTGAGAGTT TTGAAGACTGCACTTTTGACTGGTTGTATTGGCCACAAGCCAAAGAGCCCTACTCCCCAGATACCATTGAGTACATAAAA TCTCTGGATGCTGAAGAAGATATCAAGCTTTTGAAGTTTCATGGATGGGAGCTTCCTCCTGAATGCGCCCGACTCCTTCG AATATCAACCATGCTTCTGAAGAAGGGTGCAGAGAAAGGACTCCCTCCTTTCACCATTGGGAGCATCATGTGTAGAGAAA CACTGAAGAAAAAATCTGTCATTGAGCAAATTATTGAGGAAGCTGAGGAAGGTGCACTTCCTGGAACAAGCGAAGCTTCT TTTCTCGATCTTGTTTCAGTGATAATGGATAGCCATTTAGAAGAGCCATTCCCATGA
Protein sequence (LotjaGi1g1v0285300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACLALRPMHEEAFGDFTSCFSHHLRDSILIYLTVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARD KLCVRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLDLADQELVWEGEALEDQR LIEDICKDNDAVIHFLVRTSDAKVTTKPVGKDFELSIEAYTVPSFSAGQLGSVSVTNRALKRNELTREFLLEPIVVNPKI KIPQVIQELIKITSEGLEKGGKPIQSSEGSGGAYLMQDSLGLKYVSVFKPIDEEPMAINNPRGLPLSVDGEGGLKKGTRV GQGALREVAAYILDHPKKGPRSYHNSDEKGFAGVPPTVMVKCLHKGFHHPEGYNSASDNVKLGSLQMFMKNIGSCEDMGP SVFPVEEVHKISVLDIRLANADRHAGNILVAKDGENGSTVLIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSPDTIEYIK SLDAEEDIKLLKFHGWELPPECARLLRISTMLLKKGAEKGLPPFTIGSIMCRETLKKKSVIEQIIEEAEEGALPGTSEAS FLDLVSVIMDSHLEEPFP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 575 | 572 | 5.4E-275 | – | |
| PANTHER | 4 | 575 | 572 | 5.4E-275 | – | |
| ProSiteProfiles | 27 | 100 | 74 | 14.055 | ||
| CDD | 28 | 101 | 74 | 1.58792E-19 | – | |
| SMART | 29 | 100 | 72 | 0.032 | ||
| Gene3D | 29 | 105 | 77 | 6.3E-13 | – | |
| SUPERFAMILY | 34 | 102 | 69 | 2.12E-15 | ||
| Pfam | 36 | 101 | 66 | 1.0E-14 | ||
| SUPERFAMILY | 101 | 181 | 81 | 7.14E-11 | ||
| SMART | 105 | 178 | 74 | 2.3 | ||
| ProSiteProfiles | 105 | 182 | 78 | 12.052 | ||
| Gene3D | 106 | 180 | 75 | 2.7E-8 | – | |
| CDD | 107 | 174 | 68 | 3.93214E-7 | – | |
| Pfam | 107 | 179 | 73 | 4.2E-7 | ||
| Pfam | 269 | 526 | 258 | 5.4E-51 | ||
| SUPERFAMILY | 412 | 573 | 162 | 8.47E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0285300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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