Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0338500 |
| Transcript ID | LotjaGi1g1v0338500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acetolactate synthase; TAIR: AT3G48560.1 chlorsulfuron/imidazolinone resistant 1; Swiss-Prot: sp|P09114|ILVB2_TOBAC Acetolactate synthase 2, chloroplastic; TrEMBL-Plants: tr|B0FBK4|B0FBK4_9FABA Acetolactate synthase; Found in the gene: LotjaGi1g1v0338500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:79894993..79897452) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAATATGAGGCTATAACTCCCTATAACTTTGTTTCTTCACCACAGTTTGCAGCACAATCATTGTTCATCAACAAT GGCCGCCACAGCTTCAAGATCCCCATCACCATTCTCATCTCCTTCTTCAACCTCCAACTTCCCAAAACGCAATGTCAAAT TCTTCACCCTACCCTTCTCTCCCATTCTCCACAAACCTCATTCCATCGGAATCTCATGCTCCCTCTCCAAACCCGCCGCC GCCGCTGCAGCACAACCTACCGCCGCCCCCGCCGTCGAGACCTTCACCTCTCGCTTCCCCGCCGATGAGCCACGCAAAGG CGCCGACATCCTGGTGGAGGCTCTGGAGCGGGAAGGCGTGACGAACGTGTTCGCCTACCCCGGCGGCGCTTCCCTGGAGA TCCACCAGGCTCTGACACGCTCGCCAACCATCCGCAACGTGCTTCCCCGCCACGAGCAGGGCGGTGTCTTCGCCGCCGAG GGCTACGCGCGGTCCTCTGGCCTCCCCGGTGTCTGCATAGCCACCTCCGGCCCCGGCGCGACCAACCTGGTGAGCGGTCT CGCCGACGCAATGTTGGACAGCATCCCCCTCGTCGCCATCACCGGCCAGGTTCCCCGGAGGATGATCGGAACCGACGCGT TCCAGGAAACCCCCATTGTAGAGGTAACCAGATCCATCACGAAGCATAACTACCTCATCCTTGATGTGGATGAGATTCCT AGGATTGTGAAGGAGGCGTTCTTCATCGCCACTTCGGGTCGACCTGGTCCGGTTCTCATTGATGTGCCCAAAGATGTGCA GCAACAGCTTGCTGTTCCTGATTGGAACCTGCCCATCAAGCTCACCGGGTACCAGTCCAGGCTACCCAAGGCTCCCAGTG AGAAGCATTTGGAGCAGATTGTGAGGGTGATTTTAGAGTCTAAGAAACCAGTTTTGTATGTTGGAGGTGGTTGTTTGAAT TCCAGTGAGGAGTTGAGGCGTTTTGTGGAGCTTACTGGGATTCCTGTTGCTTCTACTTTGATGGGTCTTGGAGCTTATCC CATTGCAGATGAACATTCTCTTCATATGCTGGGAATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAGTAGTGATT TGCTGCTTGCTTTTGGGGTTAGGTTCGATGACCGTGTCACCGGGAAGCTTGAGGCTTTTGCAAGCAGGGCTAAGATTGTT CATATAGATATTGATTCTGCTGAGATTGGGAAGAACAAGGTGCCCCACTTGTCGGTTTGCGCGGATTTGAAGCTGGCGTT GCAAGGGATTAATAAGATTCTGGAGAGTAAACAGATCAAGGGGAAGCTTGATTTTGAAGCTTGGAGAGAAGAGCTGAATG TGCAGAAACAGAAATTTCCGTTGGGTTTCAAGACATTCGAGGATAGGATTTCGCCTCAGTATGCAATTCAGGTTCTTGAT GAGCTGACTGATGGAAATGCCATAATTAGTACTGGGGTTGGACAGCACCAGATGTGGGCTGCACAATTTTACCATTACAA GAGGCCTAGGCAGTGGTTAACTTCAGGGGGTCTTGGTGCTATGGGTTTTGGATTACCGGCTGCAATTGGCGCTGCTGTTG CTAACCCTGATGCAATTGTGGTTGACATTGATGGGGATGGTAGCTTTATCATGAATGTTCAAGAGCTGGCCACTGTAAAG GTGGAGAATCTCCCCGTTAAGATCTTGTTGCTGAATAATCAGCATTTGGGAATGGTTGTTCAGTGGGAGGATAGGTTCTA CAAGGCCAACAGAGCTCACACCTATTTGGGAGATCCGGCGAATGAGGCGGAGATTTTCCCCAACATGCTCAAGTTTGCAG ATGCTTGTGGGATACCAGCAGCTCGTGTGATGAGGAAGGATGATCTTAGAGCAGCAATTCAGAAAATGTTGGACACTCCT GGCCCCTACCTTCTTGATGTCATTGTGCCCCATCAGGAGCATGTGTTGCCAATGATTCCCAGTAATGGTTCCTTCAAGGA TGTGATCACTGAGGGTGATGGCAGAAGAAGTTACTGATTTGGCCAGGCCCAATATACCTCTGTGACTGTTATGTATCATA GTTGTTGTAGGATTTGACATGTGAGCATCATTGTAGTTTGTAGTGATTTTGGTTGCAAGACTAAGTATTTTCGTTGTCTT AATTTAATGTCGAATGCAATCTATGTCTGTACTCTGATATCTGCCGTTGTAACACCACGTTTTGCTGTAGTAAGAATGAG GAAGTGATAGTAATAATATTGATGTTCTTGAAATCTAATTGTTTCCAATGTGTCCATGCAAACACCCTCAAGTTATGATT TGCACAATTTTGTTGACAAAACATCTGTGTTCTATCTTCACTCAGTGATTCCGAAATCCAGATATAGTTTTTAGACGTTA GATTCTATATATGAAAAACGAGAACATAAATAGAGATGGAAAACCTCTTCAATAACCAGC
CDS sequence (LotjaGi1g1v0338500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCCACAGCTTCAAGATCCCCATCACCATTCTCATCTCCTTCTTCAACCTCCAACTTCCCAAAACGCAATGTCAA ATTCTTCACCCTACCCTTCTCTCCCATTCTCCACAAACCTCATTCCATCGGAATCTCATGCTCCCTCTCCAAACCCGCCG CCGCCGCTGCAGCACAACCTACCGCCGCCCCCGCCGTCGAGACCTTCACCTCTCGCTTCCCCGCCGATGAGCCACGCAAA GGCGCCGACATCCTGGTGGAGGCTCTGGAGCGGGAAGGCGTGACGAACGTGTTCGCCTACCCCGGCGGCGCTTCCCTGGA GATCCACCAGGCTCTGACACGCTCGCCAACCATCCGCAACGTGCTTCCCCGCCACGAGCAGGGCGGTGTCTTCGCCGCCG AGGGCTACGCGCGGTCCTCTGGCCTCCCCGGTGTCTGCATAGCCACCTCCGGCCCCGGCGCGACCAACCTGGTGAGCGGT CTCGCCGACGCAATGTTGGACAGCATCCCCCTCGTCGCCATCACCGGCCAGGTTCCCCGGAGGATGATCGGAACCGACGC GTTCCAGGAAACCCCCATTGTAGAGGTAACCAGATCCATCACGAAGCATAACTACCTCATCCTTGATGTGGATGAGATTC CTAGGATTGTGAAGGAGGCGTTCTTCATCGCCACTTCGGGTCGACCTGGTCCGGTTCTCATTGATGTGCCCAAAGATGTG CAGCAACAGCTTGCTGTTCCTGATTGGAACCTGCCCATCAAGCTCACCGGGTACCAGTCCAGGCTACCCAAGGCTCCCAG TGAGAAGCATTTGGAGCAGATTGTGAGGGTGATTTTAGAGTCTAAGAAACCAGTTTTGTATGTTGGAGGTGGTTGTTTGA ATTCCAGTGAGGAGTTGAGGCGTTTTGTGGAGCTTACTGGGATTCCTGTTGCTTCTACTTTGATGGGTCTTGGAGCTTAT CCCATTGCAGATGAACATTCTCTTCATATGCTGGGAATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAGTAGTGA TTTGCTGCTTGCTTTTGGGGTTAGGTTCGATGACCGTGTCACCGGGAAGCTTGAGGCTTTTGCAAGCAGGGCTAAGATTG TTCATATAGATATTGATTCTGCTGAGATTGGGAAGAACAAGGTGCCCCACTTGTCGGTTTGCGCGGATTTGAAGCTGGCG TTGCAAGGGATTAATAAGATTCTGGAGAGTAAACAGATCAAGGGGAAGCTTGATTTTGAAGCTTGGAGAGAAGAGCTGAA TGTGCAGAAACAGAAATTTCCGTTGGGTTTCAAGACATTCGAGGATAGGATTTCGCCTCAGTATGCAATTCAGGTTCTTG ATGAGCTGACTGATGGAAATGCCATAATTAGTACTGGGGTTGGACAGCACCAGATGTGGGCTGCACAATTTTACCATTAC AAGAGGCCTAGGCAGTGGTTAACTTCAGGGGGTCTTGGTGCTATGGGTTTTGGATTACCGGCTGCAATTGGCGCTGCTGT TGCTAACCCTGATGCAATTGTGGTTGACATTGATGGGGATGGTAGCTTTATCATGAATGTTCAAGAGCTGGCCACTGTAA AGGTGGAGAATCTCCCCGTTAAGATCTTGTTGCTGAATAATCAGCATTTGGGAATGGTTGTTCAGTGGGAGGATAGGTTC TACAAGGCCAACAGAGCTCACACCTATTTGGGAGATCCGGCGAATGAGGCGGAGATTTTCCCCAACATGCTCAAGTTTGC AGATGCTTGTGGGATACCAGCAGCTCGTGTGATGAGGAAGGATGATCTTAGAGCAGCAATTCAGAAAATGTTGGACACTC CTGGCCCCTACCTTCTTGATGTCATTGTGCCCCATCAGGAGCATGTGTTGCCAATGATTCCCAGTAATGGTTCCTTCAAG GATGTGATCACTGAGGGTGATGGCAGAAGAAGTTACTGA
Protein sequence (LotjaGi1g1v0338500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAATASRSPSPFSSPSSTSNFPKRNVKFFTLPFSPILHKPHSIGISCSLSKPAAAAAAQPTAAPAVETFTSRFPADEPRK GADILVEALEREGVTNVFAYPGGASLEIHQALTRSPTIRNVLPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSG LADAMLDSIPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVDEIPRIVKEAFFIATSGRPGPVLIDVPKDV QQQLAVPDWNLPIKLTGYQSRLPKAPSEKHLEQIVRVILESKKPVLYVGGGCLNSSEELRRFVELTGIPVASTLMGLGAY PIADEHSLHMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKVPHLSVCADLKLA LQGINKILESKQIKGKLDFEAWREELNVQKQKFPLGFKTFEDRISPQYAIQVLDELTDGNAIISTGVGQHQMWAAQFYHY KRPRQWLTSGGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFIMNVQELATVKVENLPVKILLLNNQHLGMVVQWEDRF YKANRAHTYLGDPANEAEIFPNMLKFADACGIPAARVMRKDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFK DVITEGDGRRSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 52 | 652 | 601 | 0.0 | – | |
| PANTHER | 52 | 652 | 601 | 0.0 | – | |
| Gene3D | 68 | 262 | 195 | 2.4E-67 | – | |
| SUPERFAMILY | 74 | 255 | 182 | 5.65E-60 | ||
| TIGRFAM | 80 | 644 | 565 | 9.7E-205 | ||
| Pfam | 80 | 243 | 164 | 3.4E-53 | ||
| CDD | 83 | 238 | 156 | 3.31173E-68 | – | |
| SUPERFAMILY | 267 | 434 | 168 | 2.84E-56 | ||
| Gene3D | 271 | 435 | 165 | 1.4E-144 | – | |
| Pfam | 272 | 402 | 131 | 3.0E-42 | ||
| Gene3D | 436 | 622 | 187 | 1.4E-144 | – | |
| SUPERFAMILY | 442 | 644 | 203 | 7.51E-65 | ||
| CDD | 444 | 635 | 192 | 1.97984E-113 | ||
| Pfam | 466 | 621 | 156 | 1.3E-46 | ||
| ProSitePatterns | 503 | 522 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Acetolactate synthase activity | Catalysis of the reaction: 2 pyruvate = 2-acetolactate + CO2. | ||
| Biological process | Branched-chain amino acid biosynthetic process | The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine. | ||
| Molecular function | Thiamine pyrophosphate binding | Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. |
Expression pattern of LotjaGi1g1v0338500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…