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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0364500 |
| Transcript ID | LotjaGi1g1v0364500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84069184..84074731) extracted from Lotus japonicus Gifu genome v1.2.
ACACACAAATATGACAGCAGATGGGGAGTTACAGCAGCTATGCATCTCAACCCTCCCTTGTTGAAATCCCAGACCAAACA TACAGGTAAGTTAATTATGACTCTTTCCATTATGTACTACTAACAGTAACAAAATTACAAATTAAATAACTATATTAATG GTGTTACATTTACTATGTTAAGGGTTTGTTTTCCTTCTATTTTTTGAGGGATTAACGTGTATTAGTTAGAACAGGTAGCT TGTATTTTAAGGGTTAATTAAGTTATTATTGTGCATTTGTGCTTTTTGAAAAAATCCAGTGACGATGAATATGCCAATGT GGATTGGGACAACCTTGGATTTGAACTAATGCCAACTGATTACATGTACATTGATAAATGTTGCGCGGGTCAAAAATTTG TACGAGGACAGCTTAGTCGTTATGGCAACATCGAACTGAGCCCATCAGCTGGGGTTCTAAATTATGGTCAGGTACGGTGT TAAACTCTCATGTCCATAACATCTTGGTCCTTTTTTATAGTTGTCTATGTACGTTTCTTCACAGAAAAACATAAGTGCTA TATTAATCTCCGGAGCTGTCAAAATTTGGCTCACGGTTTGTGGCTCGTCAATAAGTTAAGTTGGTTAATTAAAAAGCACA TCGCGCAAACATTGACAAAGATAAACCTAGACCCGATCGGCTCATCATGCCTGCGCATCAAACAAGATCACTAGGTTGAG ACTTGAGTGCCTAATATAGAATTTTGCCATAATATTACTATCTTTGAAAGTTTAATTTGCTGGATGCAATTTTAGATTTT TTTTTCTTCAAAAACTCATGAGTCAATCCACTAATCCACAACGAGTCAACCTGAGTTGATATTTTTCTTACTCTCCAAAA AATAGTCGAGCTGGTTCAACTCACCTGTAAATTCATGGTGAGTCGGCCCCAAATGAACTGTTTTGAAGCTCTAATATCGT ATAATTGAGATGTCATTACTTGTTTGGGAGACACTTGCATGTTTTTTTTAAAAAATGTCTTTCACAGAATTCAAACTTGT GTTATCATCCTTACGAGGGTCAAGTTTGCTTACTACTAAACCAACACGGTAAAAGAACCTTATTCGTTTTATGAAGTCAC AATTTACATTTTCTTTTCATAAAATGTAAGAGATGGTATAATTGTTCATGGAAAATAATTTACAAAGTCAGTATATGTCA ACTTCTTTCAGTAATTATTTTCAACCAAAATTATATAAATTTTTATTTTAAAATTAATAATTTTAACACTGTTATATTAA TTTTAACACCACAACCACCACCACTGATCTCCATCGCCACAACCTCCACTAGTGCCACCGCCGTCATACCACCACCACAA CTACCACCACTAATCTCCACCGCCACAACCTCCACTAGTGCCACCGCCGTCACACCACCCTTCACCGTCGCTACCACCCT CCACCACCACCATTGCCTCCACCACCCTTCACCACTATCACTTACGCCACCACAACCGCCATTTTCACCTCCACTACAAC TACCATGTCCACCAACACAATAGCCACCGCCACAACCACCATGTTATTGTCTTCACCATCATTGTCATGACCACCAGGTA ACACTCCCTTCACCACCACATCTTCATCGCCACTACAACCACCTCCATCGTCACCACCACCACCTTCATCGTCACCACCG CCGCCACCGACATTGGCACCACTACCACTCGACTGGCATCACCACCCTAATAACCACTACCATTACCGTCACCTCCACCG CTGCCTTCAACCACCAGTGACATCAAAACTCTATCACCACTACGACCTGACTCCTTCATTATCATGACACTGATACCATC CATTATCATGAATTCACAAATATACAAGAATAAAATTATCTTCTATAGAAAATACATGTAAGCACAAAAAAAGTAGTGGT GTTCTTATAAGAAAAGATGAACGCACCACTTATTCCATTTAATTGTAAATTTACTTTAGGGATAATAATTAATAAGTAAC TGTCTTCATCCCTGAAATGTGAAATTTAGGGATTGTTTGAAGGCACGAAAGCATGCAGAAGCGAAAATGGGCGATTGCTG CTCTTCCGTCCAGAGGAAAATGCCATCCGCATGAAGATTGGCGCCGAGAGAATGTGCATGCAATCCCCTTCAATCGATCA ATTCGTCGATGCTCTCAAGCAAACTGCACTTGCAAACAAGCGTTGGGTAAGATCATCCTAAACTAAATCAATGCATTTCA ATGATTTCGTGTTACATTTGAATTTCCTCACACAATTGATGTAAACCCTTATCAGATTCCTCCACCGGGTAAAGGATCAT TGTATATGAGGCCTCTCCTCTTAGGAAGTGGTCCAGTTTTGGGTTTGGCTCCTGCACCTGAATACACTTTCCTTGTATAT GCTTCCCCTGCTCGTAACTATTTCAAGGTTAGTGATACTTCGTTTGATTTTTACTAACTTCAACTTACTTCATAAATTCA ATCTTGTTTCTTTGTTCCCACCGCAGGAGGGTTCCGCGCCGCTCAGCTTGTTCGTGGAGGAGGATTTTGACCGTGCTTCT CGCCGCGGCACCGGAAGCGTGAAAACCATATCTAACTATGCTCCGGTATGCATTTTTCATGTCTTTAATTGAAACCAAAC CAAACTAAATTATTATCTTGTGTATAAATTAAACATCAGAACAATATAAAATGACATAGTTTTTGTTCATTTTTGTTTGG TTTAGCTGTGAGTTGTTCAAAACTTTTATTTATTGGTCGCAGCTTTCCCCAATTTCTTTGACTGTCAATTTTTCATCTAA AGTATATGTTCAGTGAATTTGGACAAAAATGTAAAGGGGGTGTTTGGACTTTGGAGTATTCAGTAAGTTGTGCTACTTGT CTTGATCTGTAGGTCTTATTGGCAGAACAAAAAGCCAAGGACAGAGGATTTTCGGATGTGTTATACCTTGATTCAGCGAC CAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGTATTATTCTGGTAGCATTTTTCTCATAAGA ATGTTGCAATACCTCGATCGACATATGATGAGTGACGTGGAAGAACAAAAGAAAAATGTACACTAACTTAGAGCTAGTGT TTGTAAGCTAATGGGAGCATACATGGCATGTCTTTCATAACCAAAGTCCAGAATTAGAAGTTGTGATGTTAATTATGGTT CTATCTGATTTAATGCAAGAAATTACACTAAACTGATTAAAAAATGTAAGTAGATTGTCATCAAAAGTTTGAGATTTTGT ATGTAAACATGGATTGGAATGAATAGGAGGTATTTTCTATATTTAATGGATCATATGATATGATCAAACATACAACATAA GATAAAAAAATAATAATGAGGTTGTGTTAGAGAACAGAATTTTAGACAATTGCAGTTAAGTTGGATTGTTTACCTTCCCT TTTTGCGCATGTTACTAAATGATTTAGTGAAATTCAATCTATAGAGCAAATTATCAACTGTCTGTATTCACTTGTAACTG GCCAATCTAATTCGTTTCCTAATCTCGCAGGGAAAATGCATCTCAACACCTGCTACCAATGGAACCATACTTCCCGGAAT CACCAGAAAAAGTGTAATTGAAATTGCTGGTGATCTTGGCTATCAGGTAAGAATATATACTTGTGGCTCCTACATTCAAT ATTTTGTGCTTGTGTTTGGATATTAGTTGAGTGCCAACTTGAATAGACTCTTATCTTGATACTCCCTCCGTTCCCATATA TAAGTCACATTTTGAGAAAAAAAAAATTTCCAAAATATAAGTCACTTTTTAGATATCTAGAAAGCATTAAATTCAGTTTT CCAAATTTACCCTTATATATACTCCTATACTCCTGCTTATCATTCCCCATGCCACTATCATTTACCACTAAATTTAATTA CTCCATAAACTAACCCAAATTTTCACAACATTTTGACTTGGTGACCGAGACAATTAATTGGCACAAGAAAAGTTAGAAAA AATTGATGAATTGAGGTGTTGTTGCTCTCAATATAAGTCTAACAAATTCATATCTATTTCCATTTGGAGTAAACTGTTTG GAGCCCACATTAACATTAGAGTATCAATATATAAGCTGAAACTGTTTTGGTTCCCAAAAAACAAATTTGGTGGGAAAAAT TTTAGTGTGAAAATTTTAGTGAAAAGGCTTGGAAGGAACTGTTTTGGTTCCAAAAAAACAAAATTGATGGGAAAATTTTT AGTATAAAAATTTCATTTCAAAGCTTGGATGAAAATTTTGGTGTTGGAGGGAGTTTTATTTCACATGATAAATTCATATC TGATTTTACGCCTAGCCTACTCAAACTTAAGTTGGAGGGAGTAATGTACAATTAAAACAATATTGAATGACTCATTGTTA TATGGAGTAGTACAACTTTAGAGATAGTGGGATATTAATACAATTTTCAGATAAAGAGAAGAATTAATTGGATTGCTAAA CTTTTAAATGGGGGCAGTTTAGGAAAATTAATTAGAAATTTTACAAATTTATTGCTTTCTAACTAGATTTTAACTACTTT CTTAATCTAAGATAATTAGTTAATTGTGACTTATATATGGGAACGGAGAGAGTATATAAGAAGAGCTATATTCACTTTTT ATGTTGAAGTGCGTGCTAATGTCCGTTTACACTAAAGCTATTGGATATACAAACATATTGTTTCTGGCTTTTTGAATTCA TGATCAGTCTTTCTCACAGACAGTAAAAATTTGAATATTCCTTTGTTATGTTTGTTTAAGCTATACCAGGTATTGATAAT TAGTTTAAATTTTCTTCTGACGAATTTTCTGTTGAAGTTTTCAGCAAATTAAAGTCGTATAACCCATTAGTATTGTCTTC TATAGCAACAAAAGACTTATCATACTAAGTGTAGTATTGTCTTCTAAACCAGTATAAATAGAAATATAAATAGGAACACT AATCTTTTAAAAAAGAAAGTCATTACAATTTACAACAAAGTAGTCTTACGAAGTTTAAGGAAAACAAATGTTTGACCAAA ACACTTGTTTGAAGTTCACATCATAGAGTTGATCAAATTAGAGCTTTGTATATTATTTTTCTCTTTCAGTTTACCGATTG ACCAAATTGGTTCAGGTAGAAGAGCGTGCTGTAAACGTGGATGAATTGATTGAGGCTGATGAAGTGTTCTGCACAGGAAC TGCTGTTGGTGTTGCAGCTGTAGGCAGTATCGCATACCAGGACAGAAGGTAATTGGTAACTTACATGTATAACAATGTAA CTTACGTTTTTAGATTAAGTAAAGCTAATTTCTTCTCTGATCATATATCAACTACTTAAAACTTCTTCTCTAGATATATT ACAAATCTTCATTTACTAGATATTTTATTGCAATTTTATTAAACAGGTATAATAAATGCACCATATTAGTCCAAAATTTA CTGAAATATTATGTTATATATCTGCAGGGTGGAATATAAGACAGGTTCTGGAACCATTTGTCAAGAGCTGTACAAAACTA TTTTAGGAATTCAAATGGGTATTATTGA
CDS sequence (LotjaGi1g1v0364500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGTTACAGCAGCTATGCATCTCAACCCTCCCTTGTTGAAATCCCAGACCAAACATACAGTGACGATGAATATGC CAATGTGGATTGGGACAACCTTGGATTTGAACTAATGCCAACTGATTACATGTACATTGATAAATGTTGCGCGGGTCAAA AATTTGTACGAGGACAGCTTAGTCGTTATGGCAACATCGAACTGAGCCCATCAGCTGGGGTTCTAAATTATGGTCAGGGA TTGTTTGAAGGCACGAAAGCATGCAGAAGCGAAAATGGGCGATTGCTGCTCTTCCGTCCAGAGGAAAATGCCATCCGCAT GAAGATTGGCGCCGAGAGAATGTGCATGCAATCCCCTTCAATCGATCAATTCGTCGATGCTCTCAAGCAAACTGCACTTG CAAACAAGCGTTGGATTCCTCCACCGGGTAAAGGATCATTGTATATGAGGCCTCTCCTCTTAGGAAGTGGTCCAGTTTTG GGTTTGGCTCCTGCACCTGAATACACTTTCCTTGTATATGCTTCCCCTGCTCGTAACTATTTCAAGGAGGGTTCCGCGCC GCTCAGCTTGTTCGTGGAGGAGGATTTTGACCGTGCTTCTCGCCGCGGCACCGGAAGCGTGAAAACCATATCTAACTATG CTCCGGTCTTATTGGCAGAACAAAAAGCCAAGGACAGAGGATTTTCGGATGTGTTATACCTTGATTCAGCGACCAAGAAA AATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGAAAATGCATCTCAACACCTGCTACCAATGGAACCAT ACTTCCCGGAATCACCAGAAAAAGTGTAATTGAAATTGCTGGTGATCTTGGCTATCAGGGTGGAATATAA
Protein sequence (LotjaGi1g1v0364500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSYSSYASQPSLVEIPDQTYSDDEYANVDWDNLGFELMPTDYMYIDKCCAGQKFVRGQLSRYGNIELSPSAGVLNYGQG LFEGTKACRSENGRLLLFRPEENAIRMKIGAERMCMQSPSIDQFVDALKQTALANKRWIPPPGKGSLYMRPLLLGSGPVL GLAPAPEYTFLVYASPARNYFKEGSAPLSLFVEEDFDRASRRGTGSVKTISNYAPVLLAEQKAKDRGFSDVLYLDSATKK NLEEVSSCNIFIAKGKCISTPATNGTILPGITRKSVIEIAGDLGYQGGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 286 | 283 | 8.1E-164 | – | |
| PANTHER | 4 | 286 | 283 | 8.1E-164 | – | |
| Gene3D | 6 | 188 | 183 | 1.7E-56 | ||
| PIRSF | 8 | 287 | 280 | 1.7E-86 | ||
| SUPERFAMILY | 20 | 285 | 266 | 4.32E-77 | ||
| CDD | 67 | 286 | 220 | 8.05178E-95 | ||
| Pfam | 80 | 284 | 205 | 2.6E-27 | ||
| Gene3D | 189 | 287 | 99 | 1.2E-32 | ||
| ProSitePatterns | 244 | 273 | 30 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Branched-chain-amino-acid transaminase activity | Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. | ||
| Biological process | Branched-chain amino acid metabolic process | The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine. |
Expression pattern of LotjaGi1g1v0364500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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