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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0379800 |
Transcript ID | LotjaGi1g1v0379800.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase; TAIR: AT5G11020.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q0V7T5|Y1864_ARATH Probable receptor-like protein kinase At1g80640; TrEMBL-Plants: tr|A0A0R0JGL2|A0A0R0JGL2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0379800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86103569..86107318) extracted from Lotus japonicus Gifu genome v1.2.
ATAGATTATTTAGATAAACCTTTTTTCATATCCCTTTCTTTTCTCTCTATTTTCTTTTTATATTGATGTCTACATAATAA AAATGTTAGATGTCTACATAATAAAAATGTTAGCACATACACACACTCTTTGGGTCTTGCTTGTGCTTCTTGTTCCTTTC TCTTCCCTCTGCATATCTTTATCCATACGTATTCTTATTTCTTTGGGAATTAGGACACACAACAATACACCATGAAAATG AAGCTTCTTCTTATGCTTCTGATGCTTCCTCCCATTCTCCACCAACCCATTTCGGTTCACGTCGCTGCCGCAGACCCTCT TGTTTCCTCCGCACAAGTTCCACTTTCCTCAGGTACTCATTTATCATCTCTCATTCTCTACTTAATCTCTGTTACGTTAG CTTAATAGTATTTTGTTTCTACCTTGTTATCAGTTATTCAGGTGGAGGAGCACCACCACCAAAAAAAACTGAATAAGAAT GTTGTAATAATCCTCGTAGCCAGCACTGCACTTGGTACTGTCATTTTGAGCTCGTTATGCTTCTGGATTTATCATAGGAA GTATCGAACAAAATCCACTAGGAACAATGTTCAAACCCCGGGTATTTATAATCAATTTTGCACTATCCCATTTCTCAGAT TTTTACTTTTTTGTCTTCAACAAACTTCTACCTACATTCTGATTTTGAATGTGAAGATGCAGAGAAGGGGCTAACATTAG CACCAATTTTGAGTAAATTCAGTTCTGTCAAGCTGGTTGGTACTATGAAGGGTTCTGTTCCAGTAATAGATTATGAGCAA ATAGAGAAAACCACCAATAATTTTAATGAAAGTAACATCTTGGGCGAGGGCGGTTTCGGCCGCGTTTACAAGGCTCGATT GGATGATAAATTGGATGTTGCTGTCAAGAAGCTACACTGCGAAAATCAGAATGCTGAAAGAGAATTTGAGGTAAAGATTT ATTATACATTTCCTGTTTGTGTTATTTTAGTTTTTTTTTTTTTTTTTTTTTCTATTTTGTGTTGAATAGTTTGATGAATT TGCAGAATGAGGTGGATTTGTTAAGAAAAATTCAGCATCCAAACATAGTTTCTTTACTAGGTTGTTGCATTAATGGCGAT ACGAGGTTTATTGTGTGTGAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGGTAAAATATTTCATAGGAGAAG ACACATTATTTTCAATTGTGAAATTATACTCATCTGTTTTCTTTTTGTCCAAAATTTGATATTGAAGGACCATCTCATGG TTCAGCATTGAATTGGCATATGAGGATGAAGATTGCTCTAGATACAGCAAGGTAATCTTCCTTAATAAGTTCTCAATCTT TGTATTGCATGTTTGTTAACATACTTTTGGACTCTAATCAGAGGATTAGAATATCTGCACGAGCACTGTTACCCTGCAGT AATACATAGAGACATGAAATCTTCTAATATTCTTTTAGATGCAAAGTTCAATGCCAAGGTAAGAATCTGTATTGAAATTG CTATGAAATTGATTTCCCCTTTCTATTCTAAATTGTTTTCATAAATGGTTATTCTTGGTGGTGGATTCAGCTTTCTGATT TTGGCCTTGCCATAACTGATGGGTCCCAAAACAAGAACATGAAGCTTTCTGGCACCTTGGGCTACGTAGCACCTGAATAT CTTTTAGATGGTATCTCAACTAACTTGTTTATGATTTCACGCCATTTACATTGGTCTGACAAGTTGCCATATCTTTAATG TATTGTTATTAATCTTTCAACAAACCATACCCAAGATATTGTTTCTTTTGGAGCCTCATTGAATTCAATGACATCATGAG TTTAGGGTGGTATTGAATTTGAAACATATGATCGATGCATTTTGTTCTCATCTTGGGCAGATATACCTGCCCATCTAACG TATCATCTATATTAATCTGAATGGACTCTTAGCATGTTTGAATCAATTTTTCCCCTCATAATCAATTATGACACTCAGAA TCTACTCATATAAACTTCACCTTAGAATTGATTTTTCCTGCAGAATCAGTTGTAAGAGATTTTGCAAACATTCAGTATGA TATGACTAACATGTTACAATCTCATAGGCTGATAAGTCTAGTTTGCTCTGGAGGTTGGGAGCAGAAAGTTATGGCTCAAT AAAAGTATCAGCAAATAATTGCGAATTGGAAATTAATTCTTGTTTGATAAATGGGAAACAAGAAATAATTTGGTGGTGGC TCTAGATTTTTTTAATTGAAGTAGATATTATATAATGAAATGGATCATTATTCCATTGACATAATATTATACAGTAGATA TTATGGAGAAATAGCTTACACCTGTACAAGCTTAATCCATGTGACAATGTGAAACATAGCATCTATACCAAAACCTCTAG AATTTTTTATTAAGGAGATTGCAGTTCAATAATTTTGCAGGTAAATTTTTTTATTAAGGAGATTGCAATTCAATAATTTT GCAGGTAAATTGACTGATAAAAGTGATGTCTATGCTTTTGGGATTGTTCTCCTGGAACTCTTATTAGGAAGGATGCCTGT GGAAAAACTAGCACCATCTCAGTGCCAATCCATTGTCACATGGGTACGGGCTGCTTTTAGTCCCATGAAGTCTAATTCAA TCAGTTTGCATTTCCAAGAATGGATTTTGATGATGGTGACATAACCATTTATGATTGCAGGCCATGCCGCAACTCACAGA TAGGTCCAAGCTCCCAAACATTGTTGATCCAGTGATTAAGAATACAATGGATCTCAAGCACTTATACCAGGTTTGTCCTT GAAGTCAGAACTCAGACACACCGAATGTGTTTGAATCAGCTTCCATTTTTATATAAAAATCTCCGAAACCTAGGAGCTAC TCATATAAACTTATCCCCTGAATTGGTTGTGACTTTAGAATCAATTGTAAAAGCAAAATTGTCTCAATTATGAACTTTGC ATGGTCTTCAGTTTTGTGGGCTTTGTATCTTGCAGGCTTCTGCGGTAGCAGTGCTGTGCGTGCAACCAGAGCCCAGTTAC CGCCCTTTGATAAAAGATGTTCTGCACTCGCTTATCCCTCTTGTTCCCATGGAGCTTGGAGGAACACTGAGAGTTTCACA AGTGACACTACATGGCTCTCTTGATGATCCACCTCTGACTCCAGTCATTGATTGAAGCCTAGCAATTTGATACACGCTAA ATGGTGAGAATCCACTGTCAATCCAGGACATGATTTGTGATTATGATGCTGGCATATATGGTGGCGAGAAGAGCAATGGA TCGGGGATAACAAATGTAAGAGACAATCCTACTTGAGTGACAAAGCTCTTCTTTTGAGTCTTGAGTGCAACTCTTTGTTC AGGCTCAAACTCAAAATCACTGATTAACTAGCTATTAGGTAATGTATGTGCTCAATGGTACTATGTATAGAGATTTTCAC ACTTAAAAAATAATAACTCACTTGTAATGTAAAAGCATTGTTCCGGCCGTTAAATAATGAATTCAGACAGCACCTCTTTA GAAAACCAAACCAGAGTGTGCTTTCTTAAGATCCAATGAAAGTTCTAGGCTTCAAAGTGATTTGTAGATGACATATTTGA ACTTACAACTAATAACTTGGCAAAAAGAAATTTACAACTAATATGGTGTTACATTTTCAGCCTGTCATTGACATATTTTC CTGCTTCTTTTTTATTTATTGCTGAAGGAATTTTATGATGGGTTGACTTAGATTAATTTTGGTGTGGATT
CDS sequence (LotjaGi1g1v0379800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATGAAGCTTCTTCTTATGCTTCTGATGCTTCCTCCCATTCTCCACCAACCCATTTCGGTTCACGTCGCTGCCGC AGACCCTCTTGTTTCCTCCGCACAAGTTCCACTTTCCTCAGTTATTCAGGTGGAGGAGCACCACCACCAAAAAAAACTGA ATAAGAATGTTGTAATAATCCTCGTAGCCAGCACTGCACTTGGTACTGTCATTTTGAGCTCGTTATGCTTCTGGATTTAT CATAGGAAGTATCGAACAAAATCCACTAGGAACAATGTTCAAACCCCGGAGAAGGGGCTAACATTAGCACCAATTTTGAG TAAATTCAGTTCTGTCAAGCTGGTTGGTACTATGAAGGGTTCTGTTCCAGTAATAGATTATGAGCAAATAGAGAAAACCA CCAATAATTTTAATGAAAGTAACATCTTGGGCGAGGGCGGTTTCGGCCGCGTTTACAAGGCTCGATTGGATGATAAATTG GATGTTGCTGTCAAGAAGCTACACTGCGAAAATCAGAATGCTGAAAGAGAATTTGAGAATGAGGTGGATTTGTTAAGAAA AATTCAGCATCCAAACATAGTTTCTTTACTAGGTTGTTGCATTAATGGCGATACGAGGTTTATTGTGTGTGAGTTGATGC AAAATGGATCCTTGGAAGCTCAGTTACATGGACCATCTCATGGTTCAGCATTGAATTGGCATATGAGGATGAAGATTGCT CTAGATACAGCAAGAGGATTAGAATATCTGCACGAGCACTGTTACCCTGCAGTAATACATAGAGACATGAAATCTTCTAA TATTCTTTTAGATGCAAAGTTCAATGCCAAGCTTTCTGATTTTGGCCTTGCCATAACTGATGGGTCCCAAAACAAGAACA TGAAGCTTTCTGGCACCTTGGGCTACGTAGCACCTGAATATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTCTAT GCTTTTGGGATTGTTCTCCTGGAACTCTTATTAGGAAGGATGCCTGTGGAAAAACTAGCACCATCTCAGTGCCAATCCAT TGTCACATGGGCCATGCCGCAACTCACAGATAGGTCCAAGCTCCCAAACATTGTTGATCCAGTGATTAAGAATACAATGG ATCTCAAGCACTTATACCAGGCTTCTGCGGTAGCAGTGCTGTGCGTGCAACCAGAGCCCAGTTACCGCCCTTTGATAAAA GATGTTCTGCACTCGCTTATCCCTCTTGTTCCCATGGAGCTTGGAGGAACACTGAGAGTTTCACAAGTGACACTACATGG CTCTCTTGATGATCCACCTCTGACTCCAGTCATTGATTGA
Protein sequence (LotjaGi1g1v0379800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMKLLLMLLMLPPILHQPISVHVAAADPLVSSAQVPLSSVIQVEEHHHQKKLNKNVVIILVASTALGTVILSSLCFWIY HRKYRTKSTRNNVQTPEKGLTLAPILSKFSSVKLVGTMKGSVPVIDYEQIEKTTNNFNESNILGEGGFGRVYKARLDDKL DVAVKKLHCENQNAEREFENEVDLLRKIQHPNIVSLLGCCINGDTRFIVCELMQNGSLEAQLHGPSHGSALNWHMRMKIA LDTARGLEYLHEHCYPAVIHRDMKSSNILLDAKFNAKLSDFGLAITDGSQNKNMKLSGTLGYVAPEYLLDGKLTDKSDVY AFGIVLLELLLGRMPVEKLAPSQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDLKHLYQASAVAVLCVQPEPSYRPLIK DVLHSLIPLVPMELGGTLRVSQVTLHGSLDDPPLTPVID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_EUK | 1 | 17 | 17 | - | – | |
SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
Phobius | 1 | 33 | 33 | - | – | |
Phobius | 1 | 4 | 4 | - | – | |
Phobius | 5 | 15 | 11 | - | – | |
TMHMM | 5 | 27 | 23 | - | – | |
Phobius | 16 | 33 | 18 | - | – | |
Phobius | 34 | 56 | 23 | - | – | |
Phobius | 57 | 80 | 24 | - | – | |
TMHMM | 58 | 80 | 23 | - | – | |
Phobius | 81 | 439 | 359 | - | – | |
PANTHER | 86 | 419 | 334 | 1.5E-145 | – | |
PANTHER | 86 | 419 | 334 | 1.5E-145 | – | |
Gene3D | 103 | 212 | 110 | 1.1E-32 | – | |
SUPERFAMILY | 114 | 406 | 293 | 4.86E-80 | ||
SMART | 137 | 407 | 271 | 1.1E-44 | ||
ProSiteProfiles | 137 | 407 | 271 | 41.036 | ||
Pfam | 138 | 404 | 267 | 2.7E-51 | ||
CDD | 143 | 409 | 267 | 7.0244E-92 | – | |
ProSitePatterns | 143 | 166 | 24 | - | ||
Coils | 164 | 184 | 21 | - | – | |
Gene3D | 213 | 412 | 200 | 1.2E-54 | – | |
ProSitePatterns | 258 | 270 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0379800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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