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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0393600 |
| Transcript ID | LotjaGi1g1v0393600.6 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type; TrEMBL-Plants: tr|A0A1J7HPA9|A0A1J7HPA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0393600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:87816624..87821324) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGGAACCCCTTATCATGGGTTATGGAAGCTGCAGCTATAATGGCTATTGCTTTGGCTAATGGTGGAGGAAGGCCACC GGATTGGCAAGATTTCGTGGGTATCATTACTCTTTTGATCATTAACTCCACAATCAGTTTCATTGAGGAAAACAATGCTG GAAATGCTGCTGCTGCACTCATGGCTGGGTTAGCTCCCAAAACCAAGGTATAATATAATACTCCTACAGTCCTACTTCAA TTTTTCATGTTTGGTTTAGCGTTGAGAGAAATTATTTTAGATAGAACTGATCTTGACGAATTGATTATAGTAAAAGTGAG TTGAAAGTGATAGTGATTTTAAAAGCTAAAAAAGTGATTCTTGTGATTTTAAAGCTAAAATCACTTTCATGTTAACGCAA AAGCTTGGTCTATTTGCTTTGGCCTCAACGTGATGTTTTCAGCTTGAAGTGCCTCTAAGAATTTCATCCAAACATGTTTT GATGATGAAGAACCACATTAGAGAGAATTAAAAGGCTTTTTATTTTATGGATGAACAACGTGAAACCAAACATATACATA TATGTTGTTAATGTTTCTTCAACTTTTTCCTGGCATGAAATTGTAGGTTCTGAGAGATGGGCGCTGGACTGAACAAGATG CTGCGATTTTGGTCCCGGGAGACATAATCAGCATCAAGTTAGGAGATATCATTCCTGCTGATGCCCGTCTTCTGGAGGGT GATGCTTTGAGTGTTGATCAGTCTGCTTTAACCGGAGAGTCTCTACCAGCGACAAAGCATCCCTCTGATGAGGTGTTTTC AGGTTCAACTGTGAAGAAAGGTGAGATAGAAGCTGTCGTGATTGCTACTGGGGTGCACACCTTCTTTGGTAAAGCGGCTC ATCTGGTCGATAGCACCAACCAAGTTGGGCACTTTCAGAAAGTCCTCACAGCAATTGGTAATTTCTGCATTTGCTCCATT GCTGTTGGGATAGTCATTGAGCTCATAGTCATGTACCCAATACAACATCGCAAGTACAGAGATGGGATTGACAATCTGCT GGTTCTATTGATTGGAGGAATTCCGATTGCCATGCCTACTGTTTTGTCTGTTACCATGGCTATTGGCTCTCACAGGCTTT CCCAGCAAGGTGCAATAACAAAAAGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTCCTCTGCAGTGACAAAACT GGGACTCTGACCCTGAATAAGCTGAGTGTTGATAGAAACTTGATTGAGGTTTTTACCAAGGGTATTGAGAAGGAGCATGT TATCCTTCTTGCAGCAAGAGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTGGGGATGCTTGCTGATC CAAAGGAGGTAAATTAAATATGCCAAAATGATCTCTATTTGGGACAAAAAAATATGAATAGTTTGGAATGAAGATAAAAG GTTTAACTTTTAATGTGAATTGGCCAGGCACGAGCTGGTGTCAGGGAGGTCCATTTTCTCCCATTCAATCCTGTGGACAA GAGGACCGCTCTAACCTACATTGATTCTGACGGAAGTTGGCATCGAGCTAGCAAAGGTGCTCCTGAGCAGGTAAATATTA TGTGTTTTTCTAGCACCATATGGTTATGTACTGATGTTGGTGTGGTTGACTAATCCATGTTTTTCTCCTTACTTAGATAT TGAACCTATGCAACTGCAAAGAGGATGTCAGAAAAAGGGCTCATAGTACTATTGACAAGTTTGCTGAGCGTGGACTCCGT TCTTTAGGTGTTGCTAGACAGGTTTGAAACACTGATATTTAACATTTGTAGTTTCCAACTTGTATAAATACTGAACACCC TTCCTTAATTGCTGTTTGTGTGGTTTGTCTATAACAGGTAGTACCTGAGAAATCAAAAGATGCTCCTGGTGCACCATGGC AATTTGTTGGTCTGCTGCCCTTGTTTGATCCTCCTAGGCACGATAGTGCGGAAACCATCACAAGAGCTCTGAACCTTGGT GTGAATGTTAAGATGATTACTGGTAAGTTTCAAGTTCAACTTTGTTCTAATTCTAGTTCATATTTATACCATTAATGAAA TCAAACATATAGCTTACAAAACTTTTGTGGGTTTCTAATTCTCCAGGGGATCAGCTTGCCATTGCCAAGGAAACTGGTCG AAGGCTTGGGATGGGAACAAACATGTACCCATCTTCTTCATTGCTTGGCCAAAGTAAGGATGCTGCTGTTTCAGCTCTTC CAGTTGATGAGTTGATTGAGAAGGCTGATGGGTTTGCTGGAGTATTCCCTGGTAGGTCCTTGATTATAATAATGATGGCA GCATCATCCACTTTCTGCTTTCAATCATTTCAAACATTTTTCATCTGTTCATGGCTTCTTTGCGAGGATATGGAATGGGA CTGCAACTTTTGTAAACAAATTGAATGAAGTTTTGAATTGCCCAATCCTGCTAACAATTTAATCTTTTTTTCTCTTTCTA TGACATTGCAGAACACAAATATGAAATCGTTAAGAGGCTGCAAGACAGGAAGCACATATGTGGAATGACAGGTGATGGTG TCAACGATGCCCCTGCATTAAAGAGAGCAGATATTGGAATTGCTGTTGCAGACGCTACAGACGCTGCTAGAAGTGCTTCT GACATTGTCCTCACTGAACCTGGGCTGAGTGTCATTATTAGTGCAGTGCTCACCAGCAGGGCGATTTTCCAAAGGATGAA AAACTACACGGTTAGTTTTCTTTCACACATAATTTAATTCCTTGATTTTATTTTCATATCTTGCAGCCTAATACCTGAAA TTTCGATTGTTGATTATGGCAGATCTATGCTGTGTCAATCACCATTCGTATAGTGGTAAGTGCAGAAAAGAGCTTAACTC AGAAAACACAATTTTTATACATGCTAGTCTACATTGTTCATATAACTTATGCCATATGTTTTCTTCATGCTGGCAGTTCG GTTTCATGTTTATTGCATTGATTTGGAAGTTTGATTTTGCACCCTTCATGGTATTGATAATTGCCATACTAAACGATGGT AAGATAATACTTGCCTGACCTTCCTGCTGTTTGCTTTGACTATTCTGTGAAATTTGATTTAATTTTCTTCACCCCTAATA CCAATAGGTACCATTATGACAATATCCAAGGATCGAGTGAAACCATCTCCAATGCCCGATAGCTGGAAGCTGAAGGAGAT ATTTGCAACCGGTGTTGTGCTAGGTAGTTACATGGCATTGATGACAGTAGTATTTTTCTGGCTCATCAAGGACACCGATT TCTTCCCGGTAATAATTTATATTTCGGGTTTCTCTCAATATTATCACTTGCTAGAGAAAATGGTAAGAGTTAAGAGTGCC GCAACTCATGCTATTGCAATTGCAGGACAAATTTGGTGTCAGGTCCATCAGAAATAGTCCTGGAGAAATGATGGCAGCCC TATACCTCCAAGTCAGTATTATTAGCCAGGCCCTTATTTTTGTCACCAGGTCCCGTAGCTGGTCCTTTGTTGAAAGACCT GGTCTTCTCCTACTTGGTGCTTTCATGATTGCTCAGCTGGTAATCTTAAACCTTTCTCCGCAAACCTAGTACATAAAGTT TTCTGTATCTTGTGATTTTATGATTGAAGCAATGCAATTTTGTTTGTACTCTTGTCAAGAATTCAGATCAATGAATGATC ATGCATTAGGAAGCAATAGTTAGTAAAATGAAATGAAGCCAATACTTTTGTTGCAATAGTTAGTGGAATAATACTTCAGC ACATGAGAAAATTAGAATTTAGGGTGCTGCTCTATCAGCTAGTTATGCAAATGATTGATTAATCAAAAGCTTTTGGCTTT CTTCTTTAGCAATAATAATCTGTTTCATGATTGACAGGTAGCAACTTTTCTAGCTGTATATGCTAATTGGAGCTTCGCAA GAATTAATGGAATGGGATGGGGTTGGGCTGGTGTAATATGGTTGTACACTATAGTAACATACATCCCTCTTGATTTACTC AAATTCGCAATCCGCTATGCTCTGAGTGGGAAAGCTTGGGATAATCTTTTAGAGAACAAGGTAATTTCTTCTTCTTTATC ACTATAGTATTGCTAAATGCATTTTTTCTTTATCTTAATCCAGAGACTTCAAGATTCAAAACCTGTTTATGCTTTCTGAT GACAGACTGCCTTCACTACAAAGAAAGACTACGGAAAGGAAGAAAGAGAAGCACAGTGGGCAGCTGCTCAGAGGACTCTT CATGGTCTTCAGCCACCGGAAACATCCAACGTCTTCAATGAAAAGAATAGCTACAGGGAGCTTTCAGAGATTGCTGAGCA AGCCAAGAGACGCGCTGAGGTTGCAAGGTAAGCCATTGGCTTCACTTGTACCATATGACATCAAGTTTGTGTCTAAAAGC ACTAGCATTTTGGATCAGATTCTGTTTCTTCATCATCAATTATGAAATTGAAAAGCAACTCACAGAAGCTTCTCCTTATA ATTGATTTGGACATTAGAATCAATTGTAGAATGATTTCCAAACATGCATTTCATGCAGTGCTATTTATAGGTAACAAATT ATATATATGATAGTCTCTTAGAGCTTTTTGAAATTGGTTCACAGGCTTAGGGAGCTTCATACTCTAAAGGGACATGTTGA GTCAGTGGTGAAGCTGAAGGGACTTGACATTGATACCATCCAGCAACATTACACGGTTTGA
CDS sequence (LotjaGi1g1v0393600.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGAACCCCTTATCATGGGTTATGGAAGCTGCAGCTATAATGGCTATTGCTTTGGCTAATGGTGGAGGAAGGCCACC GGATTGGCAAGATTTCGTGGGTATCATTACTCTTTTGATCATTAACTCCACAATCAGTTTCATTGAGGAAAACAATGCTG GAAATGCTGCTGCTGCACTCATGGCTGGGTTAGCTCCCAAAACCAAGGTTCTGAGAGATGGGCGCTGGACTGAACAAGAT GCTGCGATTTTGGTCCCGGGAGACATAATCAGCATCAAGTTAGGAGATATCATTCCTGCTGATGCCCGTCTTCTGGAGGG TGATGCTTTGAGTGTTGATCAGTCTGCTTTAACCGGAGAGTCTCTACCAGCGACAAAGCATCCCTCTGATGAGGTGTTTT CAGGTTCAACTGTGAAGAAAGGTGAGATAGAAGCTGTCGTGATTGCTACTGGGGTGCACACCTTCTTTGGTAAAGCGGCT CATCTGGTCGATAGCACCAACCAAGTTGGGCACTTTCAGAAAGTCCTCACAGCAATTGGTAATTTCTGCATTTGCTCCAT TGCTGTTGGGATAGTCATTGAGCTCATAGTCATGTACCCAATACAACATCGCAAGTACAGAGATGGGATTGACAATCTGC TGGTTCTATTGATTGGAGGAATTCCGATTGCCATGCCTACTGTTTTGTCTGTTACCATGGCTATTGGCTCTCACAGGCTT TCCCAGCAAGGTGCAATAACAAAAAGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTCCTCTGCAGTGACAAAAC TGGGACTCTGACCCTGAATAAGCTGAGTGTTGATAGAAACTTGATTGAGGTTTTTACCAAGGGTATTGAGAAGGAGCATG TTATCCTTCTTGCAGCAAGAGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTGGGGATGCTTGCTGAT CCAAAGGAGGCACGAGCTGGTGTCAGGGAGGTCCATTTTCTCCCATTCAATCCTGTGGACAAGAGGACCGCTCTAACCTA CATTGATTCTGACGGAAGTTGGCATCGAGCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTATGCAACTGCAAAGAGG ATGTCAGAAAAAGGGCTCATAGTACTATTGACAAGTTTGCTGAGCGTGGACTCCGTTCTTTAGGTGTTGCTAGACAGGTA GTACCTGAGAAATCAAAAGATGCTCCTGGTGCACCATGGCAATTTGTTGGTCTGCTGCCCTTGTTTGATCCTCCTAGGCA CGATAGTGCGGAAACCATCACAAGAGCTCTGAACCTTGGTGTGAATGTTAAGATGATTACTGGGGATCAGCTTGCCATTG CCAAGGAAACTGGTCGAAGGCTTGGGATGGGAACAAACATGTACCCATCTTCTTCATTGCTTGGCCAAAGTAAGGATGCT GCTGTTTCAGCTCTTCCAGTTGATGAGTTGATTGAGAAGGCTGATGGGTTTGCTGGAGTATTCCCTGAACACAAATATGA AATCGTTAAGAGGCTGCAAGACAGGAAGCACATATGTGGAATGACAGGTGATGGTGTCAACGATGCCCCTGCATTAAAGA GAGCAGATATTGGAATTGCTGTTGCAGACGCTACAGACGCTGCTAGAAGTGCTTCTGACATTGTCCTCACTGAACCTGGG CTGAGTGTCATTATCTATGCTGTGTCAATCACCATTCGTATAGTGTTCGGTTTCATGTTTATTGCATTGATTTGGAAGTT TGATTTTGCACCCTTCATGGTATTGATAATTGCCATACTAAACGATGGTACCATTATGACAATATCCAAGGATCGAGTGA AACCATCTCCAATGCCCGATAGCTGGAAGCTGAAGGAGATATTTGCAACCGGTGTTGTGCTAGGTAGTTACATGGCATTG ATGACAGTAGTATTTTTCTGGCTCATCAAGGACACCGATTTCTTCCCGGTAGCAACTTTTCTAGCTGTATATGCTAATTG GAGCTTCGCAAGAATTAATGGAATGGGATGGGGTTGGGCTGGTGTAATATGGTTGTACACTATAGTAACATACATCCCTC TTGATTTACTCAAATTCGCAATCCGCTATGCTCTGAGTGGGAAAGCTTGGGATAATCTTTTAGAGAACAAGACTGCCTTC ACTACAAAGAAAGACTACGGAAAGGAAGAAAGAGAAGCACAGTGGGCAGCTGCTCAGAGGACTCTTCATGGTCTTCAGCC ACCGGAAACATCCAACGTCTTCAATGAAAAGAATAGCTACAGGGAGCTTTCAGAGATTGCTGAGCAAGCCAAGAGACGCG CTGAGGTTGCAAGGCTTAGGGAGCTTCATACTCTAAAGGGACATGTTGAGTCAGTGGTGAAGCTGAAGGGACTTGACATT GATACCATCCAGCAACATTACACGGTTTGA
Protein sequence (LotjaGi1g1v0393600.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWTEQD AAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPATKHPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAA HLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFTKGIEKEHVILLAARASRTENQDAIDAAIVGMLAD PKEARAGVREVHFLPFNPVDKRTALTYIDSDGSWHRASKGAPEQILNLCNCKEDVRKRAHSTIDKFAERGLRSLGVARQV VPEKSKDAPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDA AVSALPVDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPG LSVIIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGSYMAL MTVVFFWLIKDTDFFPVATFLAVYANWSFARINGMGWGWAGVIWLYTIVTYIPLDLLKFAIRYALSGKAWDNLLENKTAF TTKKDYGKEEREAQWAAAQRTLHGLQPPETSNVFNEKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI DTIQQHYTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 174 | 174 | - | – | |
| SUPERFAMILY | 1 | 705 | 705 | 3.66E-54 | ||
| Gene3D | 1 | 95 | 95 | 1.1E-30 | – | |
| PANTHER | 1 | 655 | 655 | 0.0 | – | |
| PANTHER | 1 | 655 | 655 | 0.0 | – | |
| CDD | 1 | 699 | 699 | 0.0 | ||
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| TIGRFAM | 1 | 661 | 661 | 7.9E-287 | ||
| TIGRFAM | 35 | 280 | 246 | 1.7E-38 | ||
| Pfam | 65 | 242 | 178 | 4.3E-49 | – | |
| SUPERFAMILY | 66 | 163 | 98 | 6.54E-29 | ||
| PRINTS | 113 | 127 | 15 | 4.3E-42 | – | |
| Gene3D | 122 | 278 | 157 | 1.3E-15 | – | |
| Phobius | 175 | 201 | 27 | - | – | |
| TMHMM | 178 | 200 | 23 | - | – | |
| Phobius | 202 | 212 | 11 | - | – | |
| Phobius | 213 | 235 | 23 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 236 | 562 | 327 | - | – | |
| SFLD | 245 | 569 | 325 | 0.0 | – | |
| SFLD | 245 | 569 | 325 | 0.0 | – | |
| Pfam | 259 | 536 | 278 | 1.5E-17 | – | |
| SUPERFAMILY | 259 | 569 | 311 | 3.87E-40 | ||
| PRINTS | 263 | 277 | 15 | 4.3E-42 | – | |
| ProSitePatterns | 265 | 271 | 7 | - | ||
| Gene3D | 279 | 418 | 140 | 1.9E-48 | ||
| PRINTS | 379 | 397 | 19 | 1.4E-37 | ||
| PRINTS | 417 | 428 | 12 | 4.3E-42 | – | |
| Gene3D | 419 | 489 | 71 | 1.3E-5 | ||
| PRINTS | 439 | 449 | 11 | 4.3E-42 | – | |
| PRINTS | 494 | 510 | 17 | 1.4E-37 | ||
| TIGRFAM | 497 | 570 | 74 | 5.1E-21 | ||
| Gene3D | 505 | 657 | 153 | 2.2E-44 | – | |
| PRINTS | 522 | 538 | 17 | 1.4E-37 | ||
| PRINTS | 522 | 541 | 20 | 4.3E-42 | – | |
| PRINTS | 545 | 557 | 13 | 4.3E-42 | – | |
| PRINTS | 553 | 578 | 26 | 1.4E-37 | ||
| TMHMM | 563 | 585 | 23 | - | – | |
| Phobius | 563 | 585 | 23 | - | – | |
| Phobius | 586 | 591 | 6 | - | – | |
| TMHMM | 592 | 609 | 18 | - | – | |
| Phobius | 592 | 608 | 17 | - | – | |
| Phobius | 609 | 627 | 19 | - | – | |
| TMHMM | 627 | 649 | 23 | - | – | |
| Phobius | 628 | 649 | 22 | - | – | |
| Phobius | 650 | 653 | 4 | - | – | |
| Phobius | 654 | 670 | 17 | - | – | |
| PANTHER | 657 | 789 | 133 | 0.0 | – | |
| PANTHER | 657 | 789 | 133 | 0.0 | – | |
| Gene3D | 658 | 704 | 47 | 2.2E-15 | – | |
| TMHMM | 670 | 692 | 23 | - | – | |
| Phobius | 671 | 675 | 5 | - | – | |
| Phobius | 676 | 694 | 19 | - | – | |
| Phobius | 695 | 809 | 115 | - | – | |
| Coils | 760 | 780 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of LotjaGi1g1v0393600.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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