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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0399300 |
| Transcript ID | LotjaGi1g1v0399300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTP-binding protein; TAIR: AT5G11480.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O81004|Y2287_ARATH GTP-binding protein At2g22870; TrEMBL-Plants: tr|A0A1J7G841|A0A1J7G841_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0399300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88647776..88652146) extracted from Lotus japonicus Gifu genome v1.2.
TCCTCATTCATGGTATGTGGTATGGATAAAATAACAATCATGTATCATTTTCATTACACTCATTTTTCTTTTTTTCCTCC TCAATTCAAACAACTTAAAATCACTTCATTTTCTTTTGTCTATCTCTTTATATTATTTCTTCTTATATTCCTTCATTACA TTTTCACTTCTTCATCCAAATCCAAATAGGATTACTTCCTCTTGAGATATTTCCCCTTCTCTTCCCCCGCCACACTCCGA CTCAATTACAGAGAGAGCAATTCCTGCCTTGTATACTACACAGTACACAGTTCAGTCAGCACTCAGCAGAGAAGAGAGGT GTGTGTATTCTCCTACAGTGGCACTGTTCAACCTTACAGGGAAATGGTTCTTCTTCACCCCTCCAGATTCCCCTTCTCCT TATTAACCTTATCCCCATCACTCTCACTCCGACACTATTCCAAAACCACCCTCTTATTCCAACCCAAATCCACCCTCACC ACCACCCTAACCCCTTCTTCCCCACCACCCTTCCCCCTCGACAAACTCTTCATCCCGCCGGAGACAAAACTCCCTCTCGA CGCCGCCGCCGCCAGAATTCTCAACGGCTCCAACATCCTCCTCAGCGACTACGCCTCCGACGCTCAGGTCCTGCAAGCCG ACTTCGTCAAAAGCAGCGTCGAAACCGACGCTTGCCCCTCCGATGGCCTCCCTGAGTTCGCCCTCGTTGGTCGCTCCAAT GTCGGCAAATCCTCGCTCCTCAACTCTCTTGTTCGCCGCAAGAAACTCGCCTTGACTTCGAAGAAACCTGGTCCGCCATT AAACCCTTGCTTCCCTTTGATCTTGTGCTTATGCTCTAAACTACTACTTCCATGTGTGCCATTTCGTGTCAGTTATCACA TGATAATTAGGTTTAGTGAAGAAATTTGATGGATTTTTTATTTGTAGGTTGTTTGAATTATTATTTTTTGCTCTATGCAT TCATTCATTGACAGTATTGAACTTTTTCTGTTGCAGGGAAGACTCAATGCATTAACCATTTTCGGATTAATAATAGCTGG TACCTGGTTGATTTGCCTGGATATGGGTATGACTGTGACTTACTACTATATAAACTCAATCGTGCTATGAAAACGGCTAG CGACACACTCTTCCACACTCCGTATGACTGATCTATTTTAAAAAAACTCAACACATTTGCCTCATTAATCGACAACGTTT TAAACAAAGTGTTGGCTTTTTTAAAATTAACCCGATCACATGATGTGTGTTTAAAAGAGTATGTTGCTAGCATTTCTCTT CTGCTATGCTCATGACGTCTTACTTTATGGTAAAGATTCGGACCTTCACTGCATGTTAAAGATTGGAAGGAATTTGTGGC TAATATGTTTGATATGTACTGTGTGTTCAAATGTTAGTTATGAAATTTGAGTCTCTGACTTTAGAACAGTGGGATTCTAT TGTATTTTTACTTCTCTCTGGTTAGTGGGTAGATTATACAAGGTTGAAATCCATATGGTATTGTCTTGTGATTTGTATAA AACATTTTCTGTCCTATAGATATTATCCATGTTAGTTCTTGAAATGCTCAAGTTCTATTTTGACTTTTTATTTATATGAA GGCCTTTCTTTAAGTTATAGTTTGTGCCTTTTTTAGGATAGCTTCTTATGGATAATTTTATCCTATTCGTTATTCTTATA GCCGATGGGAGTTATAAACCACTTTTTCGTTTATTAGGTACGCATCTGCACCAAAGGAACTTAGAATGGATTGGGAGAAA TTTTCCAAAGACTATTTCCTTAACCGGTCAACCTTAGTTTCTGTTTTCCTTCTAATAGATGCTAGCATTCCCGCTAAAAA AATTGATCTCGATTATGCCAGTTGGTTGGGTCAGAATCAGGTAATATATCATTTTTCTTATTAGCAAATGTTTTAATGAA GCCAATGCTTTTTGTTTCCTATCAATCCTGCATATGCTAACCAATGGTCATGGCATGAGTTATGCGGAAGTCTGGCTCAT CTTTGTCTTCTACCTTTATCTGTCTAAATGCAGCTGCAGACAAGATATTTCTAAATAGAATTCCTGATATATAACAGTTA ACTGGCACATCTGAGTATCTATCTTACTGTCACTTCATCTTTTCCTGTAGATAATGTGCGCATGGGATGCCCTTTAGTTA TGTAAGCTGAAATCACTGAAATGATTATAATTTAATGACATCTTTAAGTAAGCTGGCTTTGCTCAGCTAGAACTCATCTA TATGGAAGAGAAATAATGTATAGTTACAACTTATATTAGGAGCTATCTATATGATATGAGTACAGAAGTAATGTATAGTC ACCTAACTGTTTGGTTTTGGGGGGGGGGGGTGGCGGGTAATAGAGGGGAGGAGAGGAGTTTTATAAAAATCCCTAATTTG GTTCACAAATTTTGAGAGGGAAATGTGTAGTATGTGTGGTGGGTGAGGGAGGGCGGGTATCCATATTTTACCTTTCCTCC AAAATTGGAGGGATTTGGAGTGGATGACAAGTGACTTATAATTTGTGGATTATGCTAACTAAACTATCCTTTGTTATTTT TTAGTTTCAAAACTATTCTTCCATATATTATCCCTAGTAAGTGATCAGCTCATTCAATTTCACATCATGCAAGCCTCAAT TCTTTAGCATCTTCACATTAGTTCGGGTCATGTGAGTTAAGGTTTTTACTGCTTCCTTTCCTCCACCTTTTTCGAGGGTA TAAAAGTATATTAATTCTATTTTTCCTTCCACTTCCTCCCCCTTCCAAACCCAATAAGGTGTGGGAAAATAAAGGTTCAG AAGAATCAGGACAGTGAGTCTGTAAAGTGTAAATGTCAAACTAAACAAGGGAGTTTTGTTTTTCCCCTCCTCCTCTCCCC TTCTTTGAACTAAAGAGTTTGTACATGTAAGCTCTTAAGAACAGAGTGCCTCTATTTAAATAGGAGCTCCATGTTTTGCC TTACACTTCTATGTCAGTCGCGTTGTGTTGAAAAGATCCGTCCATCTAAACAATGATGGACAACCAGGCTCTACTACCAC TTGAAAGCCTCTGGCCCTCTACTTCCAAACTTAACTGCAGAGTTCATAAGTTTGTTTGGTAATAAGAGTAGGGTTAATGT AGTTTTTCTTTCAGATCCCGATGACATTAATCTTCACCAAATGTGATAAACGGAAGAAGGTAAAGAACGGAGGCAAAAGA CCAGAAGAAAATGTCAATGATTTTCAGGACTTGATACGTGGCTTCTTTCAAACAGTGCCTCCATGGATCATGACCAGTAG TGTCACCCATCAGGGTCGTGATGAGATACTCCTCCATATGGCCCAGCTACGGAATTACTGGCTGAAGCACTAGTTCATGG CACCCTGTTGTTAGTGCTGGTACATCAAAACCTTGAGTTCTTAAATGACTATAGTTTAAGTCACTACATCTTTTTCTTCA TAGTGTCAATTCGTAGGTGAGACTCAGTATATCCAGCGGATTATTCAATTTTATGTTTATAGGAACAGAGAAATGGCTTT AAATTAACACTTTACATTGTATCAAAACTCAAATGTATCGCATTTTTACAACAAGTGCATGTTTTATTTATTTCATATTT ATCATTGCAGATACACGTTTACTGATAGATTTGGCTGATTACCAGTTAATATGGTTATCAATCTACCTGTATTCCATGGT GTTCTATTTCTGCATTGTCCAGTTTACTTACAGGGCCTAAAGCAAGTGACAAAGCTAGATAAAGAATCATTTACAACAAA GCTTGAGGTTCTACTTCAGCCCTGTTCAATTGTCCAACATTTTCAATAAATTTGTCGGTTTGGATTTTGAGTGGCTGCTA TTAATTACTGGAAAAGTATTAATGATACTTGCTTTAAAAAAATTGCTTGCTCTCTCAAATTCTTCTTCCAACACAGTACA AGCCTACAAGTGACCCAATGAGTACTTAAAAGTTGTTTGACCTGAGGTCTAAAGTTCAATCCTTAGGAGACGAGCTCTTA GAGAGAGACCTTTGATCTTTACCACACTCGGGTCAAATAGAATCCTCTCAATAGAGGATGCATACATACTGTTAAACTAA AGATCATAGCTATAAGTGAAAAAAAACCATTTATTGATTGGTTTAGTGATAGCGAGCCCATTGAGCCCAATTCACACACA GCTGGGATGACTACTGAAAGGCCCAGAAGAAATACAAATAGACCCAAATGACTCTAAATTATATCTAATCCTAATTATAC TTCTAGAATATTCCTCATGTTAGGATCTTGACACTTGTCAGGAGGTTCATAACTTAGGAATTAGTTCTTATCAATAAATT GTATGGAATTCATGAGAAAAAGGTATGCAGAAAATTGAGCTTGCTCGTCAT
CDS sequence (LotjaGi1g1v0399300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTTCTTCACCCCTCCAGATTCCCCTTCTCCTTATTAACCTTATCCCCATCACTCTCACTCCGACACTATTCCAA AACCACCCTCTTATTCCAACCCAAATCCACCCTCACCACCACCCTAACCCCTTCTTCCCCACCACCCTTCCCCCTCGACA AACTCTTCATCCCGCCGGAGACAAAACTCCCTCTCGACGCCGCCGCCGCCAGAATTCTCAACGGCTCCAACATCCTCCTC AGCGACTACGCCTCCGACGCTCAGGTCCTGCAAGCCGACTTCGTCAAAAGCAGCGTCGAAACCGACGCTTGCCCCTCCGA TGGCCTCCCTGAGTTCGCCCTCGTTGGTCGCTCCAATGTCGGCAAATCCTCGCTCCTCAACTCTCTTGTTCGCCGCAAGA AACTCGCCTTGACTTCGAAGAAACCTGGGAAGACTCAATGCATTAACCATTTTCGGATTAATAATAGCTGGTACCTGGTT GATTTGCCTGGATATGGGTACGCATCTGCACCAAAGGAACTTAGAATGGATTGGGAGAAATTTTCCAAAGACTATTTCCT TAACCGGTCAACCTTAGTTTCTGTTTTCCTTCTAATAGATGCTAGCATTCCCGCTAAAAAAATTGATCTCGATTATGCCA GTTGGTTGGGTCAGAATCAGATCCCGATGACATTAATCTTCACCAAATGTGATAAACGGAAGAAGGTAAAGAACGGAGGC AAAAGACCAGAAGAAAATGTCAATGATTTTCAGGACTTGATACGTGGCTTCTTTCAAACAGTGCCTCCATGGATCATGAC CAGTAGTGTCACCCATCAGGGTCGTGATGAGATACTCCTCCATATGGCCCAGCTACGGAATTACTGGCTGAAGCACTAG
Protein sequence (LotjaGi1g1v0399300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLLHPSRFPFSLLTLSPSLSLRHYSKTTLLFQPKSTLTTTLTPSSPPPFPLDKLFIPPETKLPLDAAAARILNGSNILL SDYASDAQVLQADFVKSSVETDACPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLV DLPGYGYASAPKELRMDWEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCDKRKKVKNGG KRPEENVNDFQDLIRGFFQTVPPWIMTSSVTHQGRDEILLHMAQLRNYWLKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 9 | 16 | 8 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 292 | 271 | - | – | |
| PANTHER | 49 | 292 | 244 | 4.2E-152 | – | |
| PANTHER | 49 | 292 | 244 | 4.2E-152 | – | |
| Gene3D | 85 | 287 | 203 | 6.1E-48 | – | |
| TIGRFAM | 92 | 280 | 189 | 7.3E-57 | ||
| Hamap | 97 | 286 | 190 | 23.686 | ||
| SUPERFAMILY | 103 | 288 | 186 | 5.22E-35 | ||
| ProSiteProfiles | 108 | 288 | 181 | 35.798 | ||
| CDD | 111 | 285 | 175 | 4.2239E-72 | ||
| Pfam | 112 | 229 | 118 | 1.5E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0399300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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