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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0435400 |
| Transcript ID | LotjaGi1g1v0435400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-rRNA-processing protein TSR1 like; TAIR: AT1G42440.1 pre-rRNA-processing TSR1-like protein; Swiss-Prot: sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog; TrEMBL-Plants: tr|I1JSW0|I1JSW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92968067..92976736) extracted from Lotus japonicus Gifu genome v1.2.
CCTCCAACTCTATTACTACGATATCACTAGACGCCTCGTCGCCTCCACTGCCACCTTCGCAAGCCTCCACCACCACGCCC CAAGCTCCGCTCCGCTCGTCACCGTCGTGAAGAACCCTCCCCAGGTGCCTATTCCGGTGAATCTCTGATAAAACAACAAC TCAATGCAATTTTTCAATGTTCCCTTACTCAGGTTGGTTTTGATTTCAGGTTGGGAAATCACTGTTCTGAAAAAGGGTTT TGCAACTTGGTTCAAAAGTTGAGAAGAAGCACTGATACCTATCAGTGCAACCACAATGGGAGGGTCGCGAGTTCAAGTCA ACAAGGCTCACAAGACCCGCTTCGCTTCTAAATCTTCTCGCAATCTTCATAAAACCGCTGGCAAAGGTTAGTTATTTGAT AAATATGCATCCCTTTACGCCGCTCGCGTTTGCCTTAGTTAACGTTTGGCTTTTTGATTCGGTTTGTTTAGATAGAATTG CAAAATCAGAGCACAATGTTGGCAAAGGAGCTCGTGCGGCTAGAATTCAGAGAAGTAAAATGGTATGTGTCTTTGTTTTT ATGTCCCTTATGATCTGCATTTGCTTCAGAGTCACTGATTGGAAAGTTTATAGATACGCGAGCAAAAACGAGCTGCTGTT TTGAAAGAAAAAAGAGAGCTCAGTGGGTCGAGAAGTCCGCCTCGAGTTATAGTAAGAAAACTATACCCTTTGTAGCATTG AATTGGACGTTTATTTATTGCATCCTCAATTCGTCATATTGAACTCCGTTTATGTGCTCTCTCGCAGGTTCTCTTTGCTC TTGCTGCTTCAGTGGATATAGATTCAGTTGCAGATGATCTCTTGTCATTATTATCTAAAGATTCTTCTGTAGCGCTGCCG GGAACAGTCGTGTCCTCTGAATATAGGACACGAATAACGGTATTCTTGGATTGCTGCCTTATTCTCTGGAAATTAGTAAT TCGTTGCTAGGTTTTTGCGTTTGTATGCTCTTGCCGTATGTGTGTATGAAATTGAGAAATGAGGACACAATTATAATTTA AACAGATATGCAATTGAAATTTAGTGCTGCTTTTTGTATAACCATTTTCCTAAGTATATTGTGGTGGATAGGATTTCACA GTATTGACCAAATGTTATGTGCCGCAGTTACTAAAAGCCCCTCATGGTGATCTACAATCATGCATGGAGATGGCTAAGGT ATTGTTGCCTATATTTTCTTTGTTTAGAGGTTTAATTTAGTTAAGGGGTGCTGAAAATGTGATTTTGATTACTGCTGGAC ACTATTTATGTTTTAGGTTGCTGATCTAGTGGCTTTTGTGGCCTCAGCAAGGTCTTCGTGTGAAGAAACTGATTCTTGCT ACTTCGATTCCTTTGGAAATCAATGCCTTTCTGTATTTAGGTCTCTTGGTTTACCAAGCACTGTTGTCTTTATTCGTGTA AGTTATGGCGGATCTCATTTCTTGAACTTACCAATTGATTTCACGAGCTTGCAATTATTTCAGAAGAAATTGAGTTGTAG ACGCTAACACGGAACTTTCATTTTATGCCTTCAGGATCTACCCACTGAGCTCAAACAAAGAAATGAACTAAAGAAGATGT GCACTTCTAGTCTTGCCTCTGAGTTTCCTGAGGATTGCAAATTTTATCCAGCTGATACCAAGGATGAATTACACAAGGTA ATTATTTCACTATTTTCACTATTATTTGCTAATATTTTGATAGTACCTGCTGAACTTGTCACCCAATGCATGTTCAGTTT GTTGGTCTAACTTCTCCCTCATTACAATTGCAGTTCTTGTGGCTCTTTAAAGAGCAAAGGCTTAAAGTTCCTCATTGGAG AACTCAACGATCTTACCTTATGGCTCAAAAGGTTTGGATTTATGGTGGTCCAACTTTAAACTTCTTGATTAACAAATTAG TCATGTTGGTTTTATCCGTGTATCCTGACATAATGCATTATATTTGCAAATTTGTACCACTAAGCAGCCGGCCTCACTTA GTGGGACAAGGCTTTTGTTGTTATTGTTGTTGTATCACTAAGCTAGCCTGCAGATTATATTTTAACACATGACTTAATGA AGAATCGTATAATCATATGCACCTTTTTCAAGAGCCCTTATGTTATTTGATCCACATGTTGATTTATGCTTTCAGTTTAC ATATAGTTTTCTTCTGTTGACTTTATCATGTTTACCACCATAAATTGCAGGTCGATGTAGTGTATGATGGCCATTCTGAA AAATCCACCCTCCTTCTCACTGGTTACCTTCGTGCTCGTAGCCTCTGCGTGAACCAACTGGTAATCAACAGTGTCATTGA TTTGCGATTGCTTTGAGTGTTTGGTTGTCTGAAATTTTTTTTTGGACCAGGTTCATGTTTCAGGTGCAGGAGATTTTCAA TTGTGTAAAATTGAAGTTCTTAAGGATCCCATTCCTTTGAATTCAAGAAAAAATCAGGACTTGATGGATTCAGATGAAAT GCATGATGTGGAGGTATGAGCATTTTTCCCAAATCAGCCATCAAACTTTCAAAGGAAGAGGCTGTTTTGAGGTTCATCTG GTTTTGTACATATGGAACAATATGATAAAACAACATACAACATATTTTAAGTTCGTAAGTAAAGTCATTTTAACGAATAT TAAAATTGAACAATGTTAAATTTATTAATATTACAGTAACTAGTCTCTTTTTAATCTATATGGGAGTCCGACGAACAATA AGTTAAAGGGCATTGGTAATTTATTCACCTTTGATTGGTATTCGGTAGTCAATCTGAAAACACACAAACCCCTCCCCCTC TTAAATTTGATTTACTGAAATTCTGATATCTGCTGTTCATGCAACATCTGGATATTGTGATCTTTCAAAATCTTTACCAT TTTATTGCGACATCTTCTTTAAACATTTATTTATATTTACTTATTTATTTATTTTTTCTTTTCTTTTCCTCCCTTTTAAT GTTGTAGGTCACAGGCTCCCTGTTTCCAGATCCTCAAAACCAGGAAGCTTTAGTTGTCGAGAATATACCTGATCCTCTTG CGGGAGAGCAGGTAGATAATGAATTCTCATTTCTATTATTACCCATTTGTAATTTGTAAAATTTGAGCTTCTGTATTTAG CAGTATTTGATTTGATTAACTTCGTTTTGATTAACCAAGAACAAGTTCTGAATTCTATGTATTGATTGAGTTAGAAGGTA TACAACATCTAATGTATAGTTGAGCTATAGGTTAGCTGAACCCATCAATTAGTAACAGGTTGTTACAACTACCTAACTGC AATGGTAACAGCATATAGCTGTTATACAACTATAACTACTTTGCTATCAGTTATTACATTCGTATACTACCCATTATTTA TTGCTAATTGGTTGTTGTCTAAACTATTTCTTAGCTAAGAACAGATTCTCCTCCCCCTCCCACCCTCCTAAGAAATTTTA TTCAAGTTATTGGGCGCATTATTTGCATATGCTTCCAGTGTTTATTTATTTGTAAGATTCTTTCATTGAATTTATTGGGT ATGGGATCTTTCCTTTTTACTAGACATGGCCAACAGAAGCTGAAATTACCAAGGCTGATGAAGATCGAAACCAAAAGAAG ATAAGAAAGAGAAAACTTCCTCAAGGCACTTCAGAATATCAGGTCTGTACTTGTTTTCTTCATTTGCTCATTTCTGTGTG CTTTGTGCCCCTTTTTTATTTTACATATTCTTTCATGCTAATTTCTTATATATTTCTGCTTACCAAACATCTATTATGGA TATAATATGCCTCTGGACTTGATTTTAATTATCAGGCTGCATGGATTGTCGATGATTCTGATGAGGACTCAGATCTTGAC AATGATGATGACGATGGTATGGTGATGGATGAAAGCGAAGATGGGTTTCCAGGTCAAGAGGGAAATAAGTATTCAGAATT TGATGGTGATGGAGCTTCACTAAGATTTGGAGATTCTGACGAAGAAACTGACAATGATTCAGTTATGATGGTAAGCTTCT GAAAAACACAATACTAGAATGTTGTCAATAGACTGTTGGCGTCATTAGTCTACCTCTGGTTCTTTTTCTTTTCTGGATTT AAACACTAAGCATTGGAGAATGCTCTGCTTTATCAGTTAATTTTCCCTGTGTTGTATAATGTATATTCACCTATTACTGT GAGATTTTGTTCGTGGTAATTTTGAAATATGTTAAGGGATTGTGGCATTGTGCTATGATAATCCTGATCCCTTTCCGGGT GTTTCTTTAGCTTTTTTAAATCATTAAAAGGTATTTCTTCTTTTTTAATGTGTGTGTGGTGGTGACTAACTGATGCTGGT ATAGGACTTGATCCACATAAACCACTGAAATGATTCTTACAGAAATTGATTTGGATCAATCCCAATGTTAAGCTATACCC AGTCTTCTTGTAGATCCTCTATGCTAGATTTTAGGAAATTCAAATGTGAAAATTGAATAAGTATATGATTAATTTTGTTT AAGTTAGCTTATTTTGGGGTCAAAAAAGTTTTTATAGGACTTGATATGCATACACCACTGAAAATATTCTTGCAGAATTT GATTTGGATCAACCCACATGTTGAGCTATAACTAATCATCTTGTAGATCTTCCATGCTAGATTTTATGAAATTCAAATGT GAAAACTGAATAAGTATATGATTAATCATGTCTTTAGATTAGCTTATTTTGAGCTCAAAAAAGTGATATTAGCTTACTGA GGGAGCTATTGAAAGAGAAAAAAAAATCATTTCCCTAAAAAAAGCTTTTCTAAGTTTTGTGGTTGTTATTTTGTTTAATT GATAGAGTATATTATTCATCAGCAGTTACCACTTTTTGCTTAACATTAATTTTTTTGAGCTTGTAGACTTTCAACAAAGT GGTAGGTTGTGTGAGAATTTCATCCAACCAACACTTGATGTTCATGGAGTCAATGGAACTTAATCTATATCATGAATGCT GGATTAATTTTCTTTTGCGTTACAGGAAGTAGATATCTTGACTAGAGAGAAGATACAGGATGAACTTAAGGAAATTAAAG AAGCGCATGCTGCCGACGAGGGTACTTTTCTTCTGTTCCTATTATTATTGTTATTAATTTATATGTCTCAGTTGGCTAAG TTGTCTGTAAACTAGTTTCTTGTTTTTTTTTTATAAAAAACTTCTTATTCCTATTTGTGAAGGCTTTTGTCGAAAATGAC CTTGAATAAGCCTATCAATGATTTGCAGTTTGTTGCTGATAATGATATTCTTTTTATTTGTTGCTTGTCATTGTTTTACC GTTACAGAATTTCCTGATGAAGTGGATACACCATTGGATGTCCCTGCTAGGAAGCGGTTTGCAAAATATAGGGGACTAAA GTCCTTTAGGACGTCTTCATGGGATCCTAAAGTAAGTGTCTTTTGGAGATTATTTATAGTGATATTGTCTCTTAACAAAA AAAATAAAAGCTGACTTTTCTACTAATATCAGGAATCTCTACCACAAGATTATGCCAAAATTTTTGAGTTTGACAATTTT AAAAGAACACAAAAACATGTTCTCGCTAAAGCTTTAGAATGGGAGCAAGAAAACAGGGAGGACTGCATTCCTGTTGGCTC ATATGCTAGGCTGCATATCAAGGAAGTGCCCAGTGCTGTTGCTTCAAAGTTATGTATGCTTGCAAAGACAAGCCCGGTTA TAGCATGTGGCCTGTTGAAGCATGAGTCCAAAATATCCGTCCTTCATTTCAGGTGTGTTTATGCTTTATCATTTTTCAAT TTTCAGTCAATGCTTTTCAGTGCCCTGAACATTCAAATTTCAAAAGATGTGTCAAGAGCTGAAATCACTCGTGTTTTGCA GCGTGAAAAAACATGAAACATATGATGCACCCATCAAATCCAAGGAAGAGTTAATATTTCATGTTGGATTTCGGCAATTT GTTGGCAGGTATGGTATCGATTTGAATAACCATGGCCAAAAATAGACCATTTCAGGGGAAAAATATAATTTATGTACTTT TTGCAGGCCAACTTTTTCTAGTGAATTCATAAATACAGACAAGAACAAGATGGAGAGGTTTCTCCATGCTGGGCACTTCT CAGTTGCTTCAATTTATGCACCAATTTCATTTCCTCCTCTTCCTACGATAATCCTAAAAAGAGATGGAGAGGATGCTGCA CCCAGAGTGGCTGCTGTTGGCTCACTGAAAACCGTTGACTCAGATAGGATAATCCTTAAGCGAGTTATTTTGACAGGGTA TGTTTGTTGATAGTTTGCAAGTCCCACCATTGAAAACATTGCATATTTTTTTATTGGTTCCAATGGTCTTTTTGTTTGAT GTCTTTCCCATACTGATTCTGGTAAAAAATGTAAATGTCATTTCATATTTGTATGATATTTGTGACAATCAATAATAGAA TTTCTGTTTCGCTTATTTGAAGTTTATAAATATTTTATGGTGCAGTTACCCCCAACGAGTATCAAAACGTAAGGCTTCGG TGAAGTACATGTTTTATAATCCTGAGGATGTTAAATGGTTTAAGGTAAGAAAATGTTACCCAGTTTTTGGAATCATTACA TATTGCTTGGATATTTGTGCAGAGTCAAAAAAGAGTTTATTCTCTGCATATTGTTCTCAATTATCACACTGATGAGATTT CTTATTGTGGGCGGTGATTGCAGCCTGTAGAGCTTTATACCAAACGTGGTCTTCGTGGCCGGATTAAGGAACCTGTTGGT ACACATGGTACGTTAGTTATGTTAGAAACCTTTACCATTAATTTTATGATAAACATTCTGGTGGCTACTTATTTTAGGGA GAAAACAGAGTATATATTGGTAGTCAATGATGGACTGATGCATTTCATGATTTCTCATCCTTGACCCATTGTTCATACTG TTTACCTTTATTTTCTTATGTTGGAAAATTCCTTATCCATTGGGGGATTTTGGTGTACCAATGACCGGAGAGGTTCTGAA ACTGGAACTCTCCGGAGCTGAGAGGTCAAGGGGTGACGGCGGTGACATCGCCGGCGCTTTTCAGGTGTACGAAGGTGGGT TGGGGAATATGATGAACAGGGTGAGTTGGGGAAGATGAAGAGGTTATAACTTTACATTTTTATCCTTTCTGTCATCATTC AATCCTAACCATCAATCAAAAGAATATTCCAAGATTCTCAGATCCAACGGCATATGATGATGGTCCACCGGTGGACCAAT TTTAAAGTTGTCCACCCTAGTGGGCACCAAAATCCCAATGACCACCCCTTACTCCATGATGATCTTGTGCTTGGATTAGA GTAGTATATAGGGACTTGATGGGAAAATTTAAACTAGTTAGATAAAATACGATTAAGATCATTACATCTGCTCCACTGTT GAATATTGATTGCAATAGTTTGCTTGCGGGAGTAATGTTACTTGACTCTTGTAAACACAACTGTACTCACTTCTTAATTT AAGTTCAATTGGTTCTGCATGAACATTTTATGTTGAGCCCATAGATTCTTGGATATTTGTGCTTCTGTTTGAGATTTTTG CTGGAAGCACTATCTAGTGTATTGTAATTATATGTTGGAGTGTGGTAAAAATGAAAAGGGTGGACGAGGTGTGGAACTGC GGATGAGGTGGCGCAGATGAAAAAGGTGAAGATATGATATCCTTTGGGTTTGACAAGTGAAGATTTAAACTTGACAAAAC AAATGACAATGTACTTTATAGCTTGATTTGGTTAGCAAGTATTTTATGTTTTTCGTTTCACATTTCAGCTTGTAGCCATT GATATTCAAATATACATGAAATGCATGATGTTGATCATACTTTATATTGTTTCCCAGGAGCAATGAAATGCCTTCTGAAC GGCGTTCTTGAACAGCGTGATACTGTGTGTATGAATTTATTCAAACGTGCATACCCGAAGTGGCCAAACTATCATTTTCC TTTAAATTAGAGCTCTGATGGGATGGCAGTTGAATTCTCTTGGTCAAGTAATTCAGGAGAATGCCAATTGTATATTGATC GGGAATGAAGCTCTGGTTCAGATTGACTTCCTTTTATGGAAGATGCAGTTTATATATAGTTTATAACCTTATTTTTAAGG GGGGGAAGATTTTGATGGCCAGGTCCCCCCCTGCTCATGTGCAATATGGGAGAAGTTAACAGTATATCAGAGTTTCTTAT TAATTTTTTTTTGGGTATTTGCATGGAAAACTAGAGGTCTGTAGTAAGGTATGAACGATATCTTAGCTGAAAGCTTATTT AAATTCAGGTAACTTATGTAGTAGGGTGTATGGAAGCACCTTGTGTTGGTACTGATTGGGGGTCAAGCTGCCAAATGCAT CCAGTTGAATGAGTTTTTTTTTTTTTTGATAAACCCCTGTTGAAATTTTCTGTGATAAAATTTTATATTTATCAATAGAA ATTATGAGTTTAATGGATATACGAATTTTTACAGTCAACCATTTATATATATTTGAGATTCGCCACATCATTCTTTGTCC TTAAAAATAATTTAAATAAATATAAAAACTGTATGAGGTCAGACTAGTCTTGCAGAAAAGTAAAACAGAAAAATGGAGAT TTCAATCAAAATGAATAGATAGATTGCATACAAGTTTTTGTAAGTATCGGACTTAGATTGCATGGATTACTTCAAGTGTA TATAAAAATATAGATATACGTACATTAAAT
CDS sequence (LotjaGi1g1v0435400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGGGTCGCGAGTTCAAGTCAACAAGGCTCACAAGACCCGCTTCGCTTCTAAATCTTCTCGCAATCTTCATAAAAC CGCTGGCAAAGATAGAATTGCAAAATCAGAGCACAATGTTGGCAAAGGAGCTCGTGCGGCTAGAATTCAGAGAAGTAAAA TGATACGCGAGCAAAAACGAGCTGCTGTTTTGAAAGAAAAAAGAGAGCTCAGTGGGTCGAGAAGTCCGCCTCGAGTTATA GTTCTCTTTGCTCTTGCTGCTTCAGTGGATATAGATTCAGTTGCAGATGATCTCTTGTCATTATTATCTAAAGATTCTTC TGTAGCGCTGCCGGGAACAGTCGTGTCCTCTGAATATAGGACACGAATAACGTTACTAAAAGCCCCTCATGGTGATCTAC AATCATGCATGGAGATGGCTAAGGTTGCTGATCTAGTGGCTTTTGTGGCCTCAGCAAGGTCTTCGTGTGAAGAAACTGAT TCTTGCTACTTCGATTCCTTTGGAAATCAATGCCTTTCTGTATTTAGGTCTCTTGGTTTACCAAGCACTGTTGTCTTTAT TCGTGATCTACCCACTGAGCTCAAACAAAGAAATGAACTAAAGAAGATGTGCACTTCTAGTCTTGCCTCTGAGTTTCCTG AGGATTGCAAATTTTATCCAGCTGATACCAAGGATGAATTACACAAGTTCTTGTGGCTCTTTAAAGAGCAAAGGCTTAAA GTTCCTCATTGGAGAACTCAACGATCTTACCTTATGGCTCAAAAGGTCGATGTAGTGTATGATGGCCATTCTGAAAAATC CACCCTCCTTCTCACTGGTTACCTTCGTGCTCGTAGCCTCTGCGTGAACCAACTGGTTCATGTTTCAGGTGCAGGAGATT TTCAATTGTGTAAAATTGAAGTTCTTAAGGATCCCATTCCTTTGAATTCAAGAAAAAATCAGGACTTGATGGATTCAGAT GAAATGCATGATGTGGAGGTCACAGGCTCCCTGTTTCCAGATCCTCAAAACCAGGAAGCTTTAGTTGTCGAGAATATACC TGATCCTCTTGCGGGAGAGCAGACATGGCCAACAGAAGCTGAAATTACCAAGGCTGATGAAGATCGAAACCAAAAGAAGA TAAGAAAGAGAAAACTTCCTCAAGGCACTTCAGAATATCAGGCTGCATGGATTGTCGATGATTCTGATGAGGACTCAGAT CTTGACAATGATGATGACGATGGTATGGTGATGGATGAAAGCGAAGATGGGTTTCCAGGTCAAGAGGGAAATAAGTATTC AGAATTTGATGGTGATGGAGCTTCACTAAGATTTGGAGATTCTGACGAAGAAACTGACAATGATTCAGTTATGATGGAAG TAGATATCTTGACTAGAGAGAAGATACAGGATGAACTTAAGGAAATTAAAGAAGCGCATGCTGCCGACGAGGAATTTCCT GATGAAGTGGATACACCATTGGATGTCCCTGCTAGGAAGCGGTTTGCAAAATATAGGGGACTAAAGTCCTTTAGGACGTC TTCATGGGATCCTAAAGAATCTCTACCACAAGATTATGCCAAAATTTTTGAGTTTGACAATTTTAAAAGAACACAAAAAC ATGTTCTCGCTAAAGCTTTAGAATGGGAGCAAGAAAACAGGGAGGACTGCATTCCTGTTGGCTCATATGCTAGGCTGCAT ATCAAGGAAGTGCCCAGTGCTGTTGCTTCAAAGTTATGTATGCTTGCAAAGACAAGCCCGGTTATAGCATGTGGCCTGTT GAAGCATGAGTCCAAAATATCCGTCCTTCATTTCAGCGTGAAAAAACATGAAACATATGATGCACCCATCAAATCCAAGG AAGAGTTAATATTTCATGTTGGATTTCGGCAATTTGTTGGCAGGCCAACTTTTTCTAGTGAATTCATAAATACAGACAAG AACAAGATGGAGAGGTTTCTCCATGCTGGGCACTTCTCAGTTGCTTCAATTTATGCACCAATTTCATTTCCTCCTCTTCC TACGATAATCCTAAAAAGAGATGGAGAGGATGCTGCACCCAGAGTGGCTGCTGTTGGCTCACTGAAAACCGTTGACTCAG ATAGGATAATCCTTAAGCGAGTTATTTTGACAGGTTACCCCCAACGAGTATCAAAACGTAAGGCTTCGGTGAAGTACATG TTTTATAATCCTGAGGATGTTAAATGGTTTAAGCCTGTAGAGCTTTATACCAAACGTGGTCTTCGTGGCCGGATTAAGGA ACCTGTTGGTACACATGGAGCAATGAAATGCCTTCTGAACGGCGTTCTTGAACAGCGTGATACTGTGTGTATGAATTTAT TCAAACGTGCATACCCGAAGTGGCCAAACTATCATTTTCCTTTAAATTAG
Protein sequence (LotjaGi1g1v0435400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGSRVQVNKAHKTRFASKSSRNLHKTAGKDRIAKSEHNVGKGARAARIQRSKMIREQKRAAVLKEKRELSGSRSPPRVI VLFALAASVDIDSVADDLLSLLSKDSSVALPGTVVSSEYRTRITLLKAPHGDLQSCMEMAKVADLVAFVASARSSCEETD SCYFDSFGNQCLSVFRSLGLPSTVVFIRDLPTELKQRNELKKMCTSSLASEFPEDCKFYPADTKDELHKFLWLFKEQRLK VPHWRTQRSYLMAQKVDVVYDGHSEKSTLLLTGYLRARSLCVNQLVHVSGAGDFQLCKIEVLKDPIPLNSRKNQDLMDSD EMHDVEVTGSLFPDPQNQEALVVENIPDPLAGEQTWPTEAEITKADEDRNQKKIRKRKLPQGTSEYQAAWIVDDSDEDSD LDNDDDDGMVMDESEDGFPGQEGNKYSEFDGDGASLRFGDSDEETDNDSVMMEVDILTREKIQDELKEIKEAHAADEEFP DEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPQDYAKIFEFDNFKRTQKHVLAKALEWEQENREDCIPVGSYARLH IKEVPSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSVKKHETYDAPIKSKEELIFHVGFRQFVGRPTFSSEFINTDK NKMERFLHAGHFSVASIYAPISFPPLPTIILKRDGEDAAPRVAAVGSLKTVDSDRIILKRVILTGYPQRVSKRKASVKYM FYNPEDVKWFKPVELYTKRGLRGRIKEPVGTHGAMKCLLNGVLEQRDTVCMNLFKRAYPKWPNYHFPLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 48 | 48 | - | – | |
| PANTHER | 2 | 786 | 785 | 0.0 | ||
| PANTHER | 2 | 786 | 785 | 0.0 | – | |
| MobiDBLite | 24 | 48 | 25 | - | – | |
| ProSiteProfiles | 76 | 249 | 174 | 9.411 | ||
| SMART | 226 | 306 | 81 | 1.2E-22 | ||
| Pfam | 226 | 305 | 80 | 3.4E-18 | ||
| MobiDBLite | 386 | 431 | 46 | - | – | |
| MobiDBLite | 391 | 413 | 23 | - | – | |
| SMART | 482 | 777 | 296 | 1.1E-152 | ||
| Pfam | 483 | 779 | 297 | 1.8E-114 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Ribosome biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. |
Expression pattern of LotjaGi1g1v0435400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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