Domain Predictions — View

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PS51714

Source: ProSiteProfiles

Description

Bms1-type guanine nucleotide-binding (G) domain profile.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v2280660.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pre-rRNA-processing protein TSR1 homolog [Glycine max] gi\|356508752\|ref\|XP_003523118.1\|	Domains IPR007034 IPR012948 IPR030387 PF04950 PF08142 PS51714 PTHR12858 PTHR12858:SF1 SM00785 SM01362 mobidb-lite	11
Lj1g3v4831840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max] gi\|356544500\|ref\|XP_003540688.1\|	Domains Coil G3DSA:3.40.50.300 IPR007034 IPR012948 IPR027417 IPR030387 PF04950 PF08142 PS51714 PTHR12858 PTHR12858:SF2 SM00785 SM01362 SSF52540 mobidb-lite	15
Lj1g3v4831840.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max] gi\|356544500\|ref\|XP_003540688.1\|	Domains Coil G3DSA:3.40.50.300 IPR007034 IPR012948 IPR027417 IPR030387 PF04950 PF08142 PS51714 PTHR12858 PTHR12858:SF2 SM00785 SM01362 SSF52540 cd01882 mobidb-lite	16
LotjaGi1g1v0435400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pre-rRNA-processing protein TSR1 like; TAIR: AT1G42440.1 pre-rRNA-processing TSR1-like protein; Swiss-Prot: sp\|Q5XGY1\|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog; TrEMBL-Plants: tr\|I1JSW0\|I1JSW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435400	Domains IPR007034 IPR012948 IPR030387 IPR039761 PF04950 PF08142 PS51714 PTHR12858 PTHR12858:SF1 SM00785 SM01362 mobidb-lite	12
LotjaGi1g1v0435400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pre-rRNA-processing protein TSR1 like; TAIR: AT1G42440.1 pre-rRNA-processing TSR1-like protein; Swiss-Prot: sp\|Q5XGY1\|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog; TrEMBL-Plants: tr\|I1JSW0\|I1JSW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435400	Domains IPR007034 IPR012948 IPR030387 IPR039761 PF04950 PF08142 PS51714 PTHR12858 PTHR12858:SF1 SM00785 SM01362 mobidb-lite	12
LotjaGi1g1v0756800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosome biogenesis protein BMS1; TAIR: AT1G06720.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|O94653\|BMS1_SCHPO Ribosome biogenesis protein bms1; TrEMBL-Plants: tr\|I1LQB2\|I1LQB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756800	Domains Coil G3DSA:3.40.50.300 IPR007034 IPR012948 IPR027417 IPR030387 IPR037875 IPR039761 PF04950 PF08142 PS51714 PTHR12858 PTHR12858:SF2 SM00785 SM01362 SSF52540 cd01882 mobidb-lite	18
LotjaGi1g1v0756800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribosome biogenesis protein BMS1; TAIR: AT1G06720.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|O94653\|BMS1_SCHPO Ribosome biogenesis protein bms1; TrEMBL-Plants: tr\|I1LQB2\|I1LQB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756800	Domains Coil G3DSA:3.40.50.300 IPR007034 IPR012948 IPR027417 IPR030387 IPR037875 IPR039761 PF04950 PF08142 PS51714 PTHR12858 PTHR12858:SF2 SM00785 SM01362 SSF52540 cd01882 mobidb-lite	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29