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IPR012948 is a AARP2CN.
<p>This domain is the central domain of AARP2 (asparagine and aspartate rich protein 2). It is weakly similar to the GTP-binding domain of elongation factor TU [[cite:PUB00016366]]. PfAARP2 is an antigen from Plasmodium falciparum of 150kDa, which is encoded by a unique gene on chromosome 1 [[cite:PUB00043402]]. The central region of Pfaarp2 contains blocks of repetitions encoding asparagine and aspartate residues.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Ribosome biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: pre-rRNA-processing protein TSR1 homolog [Glycine max] gi|356508752|ref|XP_003523118.1| | 11 | ||
| – | PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max] gi|356544500|ref|XP_003540688.1| | 15 | ||
| – | PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max] gi|356544500|ref|XP_003540688.1| | 16 | ||
| – | PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max] gi|356544500|ref|XP_003540688.1| | 12 | ||
| – | Pre-rRNA-processing protein TSR1 like; TAIR: AT1G42440.1 pre-rRNA-processing TSR1-like protein; Swiss-Prot: sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog; TrEMBL-Plants: tr|I1JSW0|I1JSW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435400 | 12 | ||
| – | Pre-rRNA-processing protein TSR1 like; TAIR: AT1G42440.1 pre-rRNA-processing TSR1-like protein; Swiss-Prot: sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog; TrEMBL-Plants: tr|I1JSW0|I1JSW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435400 | 12 | ||
| – | Ribosome biogenesis protein BMS1; TAIR: AT1G06720.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O94653|BMS1_SCHPO Ribosome biogenesis protein bms1; TrEMBL-Plants: tr|I1LQB2|I1LQB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756800 | 18 | ||
| – | Ribosome biogenesis protein BMS1; TAIR: AT1G06720.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O94653|BMS1_SCHPO Ribosome biogenesis protein bms1; TrEMBL-Plants: tr|I1LQB2|I1LQB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756800 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 12.50 |