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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0435400 |
| Transcript ID | LotjaGi1g1v0435400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-rRNA-processing protein TSR1 like; TAIR: AT1G42440.1 pre-rRNA-processing TSR1-like protein; Swiss-Prot: sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog; TrEMBL-Plants: tr|I1JSW0|I1JSW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92968401..92976708) extracted from Lotus japonicus Gifu genome v1.2.
AGACGCCTCGTCGCCTCCACTGCCACCTTCGCAAGCCTCCACCACCACGCCCCAAGCTCCGCTCCGCTCGTCACCGTCGT GAAGAACCCTCCCCAGGTGCCTATTCCGGTGAATCTCTGATAAAACAACAACTCAATGCAATTTTTCAATGTTCCCTTAC TCAGGTTGGTTTTGATTTCAGGTTGGGAAATCACTGTTCTGAAAAAGGGTTTTGCAACTTGGTTCAAAAGTTGAGAAGAA GCACTGATACCTATCAGTGCAACCACAATGGGAGGGTCGCGAGTTCAAGTCAACAAGGCTCACAAGACCCGCTTCGCTTC TAAATCTTCTCGCAATCTTCATAAAACCGCTGGCAAAGGTTAGTTATTTGATAAATATGCATCCCTTTACGCCGCTCGCG TTTGCCTTAGTTAACGTTTGGCTTTTTGATTCGGTTTGTTTAGATAGAATTGCAAAATCAGAGCACAATGTTGGCAAAGG AGCTCGTGCGGCTAGAATTCAGAGAAGTAAAATGGTATGTGTCTTTGTTTTTATGTCCCTTATGATCTGCATTTGCTTCA GAGTCACTGATTGGAAAGTTTATAGATACGCGAGCAAAAACGAGCTGCTGTTTTGAAAGAAAAAAGAGAGCTCAGTGGGT CGAGAAGTCCGCCTCGAGTTATAGTAAGAAAACTATACCCTTTGTAGCATTGAATTGGACGTTTATTTATTGCATCCTCA ATTCGTCATATTGAACTCCGTTTATGTGCTCTCTCGCAGGTTCTCTTTGCTCTTGCTGCTTCAGTGGATATAGATTCAGT TGCAGATGATCTCTTGTCATTATTATCTAAAGATTCTTCTGTAGCGCTGCCGGGAACAGTCGTGTCCTCTGAATATAGGA CACGAATAACGGTATTCTTGGATTGCTGCCTTATTCTCTGGAAATTAGTAATTCGTTGCTAGGTTTTTGCGTTTGTATGC TCTTGCCGTATGTGTGTATGAAATTGAGAAATGAGGACACAATTATAATTTAAACAGATATGCAATTGAAATTTAGTGCT GCTTTTTGTATAACCATTTTCCTAAGTATATTGTGGTGGATAGGATTTCACAGTATTGACCAAATGTTATGTGCCGCAGT TACTAAAAGCCCCTCATGGTGATCTACAATCATGCATGGAGATGGCTAAGGTATTGTTGCCTATATTTTCTTTGTTTAGA GGTTTAATTTAGTTAAGGGGTGCTGAAAATGTGATTTTGATTACTGCTGGACACTATTTATGTTTTAGGTTGCTGATCTA GTGGCTTTTGTGGCCTCAGCAAGGTCTTCGTGTGAAGAAACTGATTCTTGCTACTTCGATTCCTTTGGAAATCAATGCCT TTCTGTATTTAGGTCTCTTGGTTTACCAAGCACTGTTGTCTTTATTCGTGTAAGTTATGGCGGATCTCATTTCTTGAACT TACCAATTGATTTCACGAGCTTGCAATTATTTCAGAAGAAATTGAGTTGTAGACGCTAACACGGAACTTTCATTTTATGC CTTCAGGATCTACCCACTGAGCTCAAACAAAGAAATGAACTAAAGAAGATGTGCACTTCTAGTCTTGCCTCTGAGTTTCC TGAGGATTGCAAATTTTATCCAGCTGATACCAAGGATGAATTACACAAGGTAATTATTTCACTATTTTCACTATTATTTG CTAATATTTTGATAGTACCTGCTGAACTTGTCACCCAATGCATGTTCAGTTTGTTGGTCTAACTTCTCCCTCATTACAAT TGCAGTTCTTGTGGCTCTTTAAAGAGCAAAGGCTTAAAGTTCCTCATTGGAGAACTCAACGATCTTACCTTATGGCTCAA AAGGTTTGGATTTATGGTGGTCCAACTTTAAACTTCTTGATTAACAAATTAGTCATGTTGGTTTTATCCGTGTATCCTGA CATAATGCATTATATTTGCAAATTTGTACCACTAAGCAGCCGGCCTCACTTAGTGGGACAAGGCTTTTGTTGTTATTGTT GTTGTATCACTAAGCTAGCCTGCAGATTATATTTTAACACATGACTTAATGAAGAATCGTATAATCATATGCACCTTTTT CAAGAGCCCTTATGTTATTTGATCCACATGTTGATTTATGCTTTCAGTTTACATATAGTTTTCTTCTGTTGACTTTATCA TGTTTACCACCATAAATTGCAGGTCGATGTAGTGTATGATGGCCATTCTGAAAAATCCACCCTCCTTCTCACTGGTTACC TTCGTGCTCGTAGCCTCTGCGTGAACCAACTGGTAATCAACAGTGTCATTGATTTGCGATTGCTTTGAGTGTTTGGTTGT CTGAAATTTTTTTTTGGACCAGGTTCATGTTTCAGGTGCAGGAGATTTTCAATTGTGTAAAATTGAAGTTCTTAAGGATC CCATTCCTTTGAATTCAAGAAAAAATCAGGACTTGATGGATTCAGATGAAATGCATGATGTGGAGGTATGAGCATTTTTC CCAAATCAGCCATCAAACTTTCAAAGGAAGAGGCTGTTTTGAGGTTCATCTGGTTTTGTACATATGGAACAATATGATAA AACAACATACAACATATTTTAAGTTCGTAAGTAAAGTCATTTTAACGAATATTAAAATTGAACAATGTTAAATTTATTAA TATTACAGTAACTAGTCTCTTTTTAATCTATATGGGAGTCCGACGAACAATAAGTTAAAGGGCATTGGTAATTTATTCAC CTTTGATTGGTATTCGGTAGTCAATCTGAAAACACACAAACCCCTCCCCCTCTTAAATTTGATTTACTGAAATTCTGATA TCTGCTGTTCATGCAACATCTGGATATTGTGATCTTTCAAAATCTTTACCATTTTATTGCGACATCTTCTTTAAACATTT ATTTATATTTACTTATTTATTTATTTTTTCTTTTCTTTTCCTCCCTTTTAATGTTGTAGGTCACAGGCTCCCTGTTTCCA GATCCTCAAAACCAGGAAGCTTTAGTTGTCGAGAATATACCTGATCCTCTTGCGGGAGAGCAGGTAGATAATGAATTCTC ATTTCTATTATTACCCATTTGTAATTTGTAAAATTTGAGCTTCTGTATTTAGCAGTATTTGATTTGATTAACTTCGTTTT GATTAACCAAGAACAAGTTCTGAATTCTATGTATTGATTGAGTTAGAAGGTATACAACATCTAATGTATAGTTGAGCTAT AGGTTAGCTGAACCCATCAATTAGTAACAGGTTGTTACAACTACCTAACTGCAATGGTAACAGCATATAGCTGTTATACA ACTATAACTACTTTGCTATCAGTTATTACATTCGTATACTACCCATTATTTATTGCTAATTGGTTGTTGTCTAAACTATT TCTTAGCTAAGAACAGATTCTCCTCCCCCTCCCACCCTCCTAAGAAATTTTATTCAAGTTATTGGGCGCATTATTTGCAT ATGCTTCCAGTGTTTATTTATTTGTAAGATTCTTTCATTGAATTTATTGGGTATGGGATCTTTCCTTTTTACTAGACATG GCCAACAGAAGCTGAAATTACCAAGGCTGATGAAGATCGAAACCAAAAGAAGATAAGAAAGAGAAAACTTCCTCAAGGCA CTTCAGAATATCAGGTCTGTACTTGTTTTCTTCATTTGCTCATTTCTGTGTGCTTTGTGCCCCTTTTTTATTTTACATAT TCTTTCATGCTAATTTCTTATATATTTCTGCTTACCAAACATCTATTATGGATATAATATGCCTCTGGACTTGATTTTAA TTATCAGGCTGCATGGATTGTCGATGATTCTGATGAGGACTCAGATCTTGACAATGATGATGACGATGGTATGGTGATGG ATGAAAGCGAAGATGGGTTTCCAGGTCAAGAGGGAAATAAGTATTCAGAATTTGATGGTGATGGAGCTTCACTAAGATTT GGAGATTCTGACGAAGAAACTGACAATGATTCAGTTATGATGGTAAGCTTCTGAAAAACACAATACTAGAATGTTGTCAA TAGACTGTTGGCGTCATTAGTCTACCTCTGGTTCTTTTTCTTTTCTGGATTTAAACACTAAGCATTGGAGAATGCTCTGC TTTATCAGTTAATTTTCCCTGTGTTGTATAATGTATATTCACCTATTACTGTGAGATTTTGTTCGTGGTAATTTTGAAAT ATGTTAAGGGATTGTGGCATTGTGCTATGATAATCCTGATCCCTTTCCGGGTGTTTCTTTAGCTTTTTTAAATCATTAAA AGGTATTTCTTCTTTTTTAATGTGTGTGTGGTGGTGACTAACTGATGCTGGTATAGGACTTGATCCACATAAACCACTGA AATGATTCTTACAGAAATTGATTTGGATCAATCCCAATGTTAAGCTATACCCAGTCTTCTTGTAGATCCTCTATGCTAGA TTTTAGGAAATTCAAATGTGAAAATTGAATAAGTATATGATTAATTTTGTTTAAGTTAGCTTATTTTGGGGTCAAAAAAG TTTTTATAGGACTTGATATGCATACACCACTGAAAATATTCTTGCAGAATTTGATTTGGATCAACCCACATGTTGAGCTA TAACTAATCATCTTGTAGATCTTCCATGCTAGATTTTATGAAATTCAAATGTGAAAACTGAATAAGTATATGATTAATCA TGTCTTTAGATTAGCTTATTTTGAGCTCAAAAAAGTGATATTAGCTTACTGAGGGAGCTATTGAAAGAGAAAAAAAAATC ATTTCCCTAAAAAAAGCTTTTCTAAGTTTTGTGGTTGTTATTTTGTTTAATTGATAGAGTATATTATTCATCAGCAGTTA CCACTTTTTGCTTAACATTAATTTTTTTGAGCTTGTAGACTTTCAACAAAGTGGTAGGTTGTGTGAGAATTTCATCCAAC CAACACTTGATGTTCATGGAGTCAATGGAACTTAATCTATATCATGAATGCTGGATTAATTTTCTTTTGCGTTACAGGAA GTAGATATCTTGACTAGAGAGAAGATACAGGATGAACTTAAGGAAATTAAAGAAGCGCATGCTGCCGACGAGGGTACTTT TCTTCTGTTCCTATTATTATTGTTATTAATTTATATGTCTCAGTTGGCTAAGTTGTCTGTAAACTAGTTTCTTGTTTTTT TTTTATAAAAAACTTCTTATTCCTATTTGTGAAGGCTTTTGTCGAAAATGACCTTGAATAAGCCTATCAATGATTTGCAG TTTGTTGCTGATAATGATATTCTTTTTATTTGTTGCTTGTCATTGTTTTACCGTTACAGAATTTCCTGATGAAGTGGATA CACCATTGGATGTCCCTGCTAGGAAGCGGTTTGCAAAATATAGGGGACTAAAGTCCTTTAGGACGTCTTCATGGGATCCT AAAGTAAGTGTCTTTTGGAGATTATTTATAGTGATATTGTCTCTTAACAAAAAAAATAAAAGCTGACTTTTCTACTAATA TCAGGAATCTCTACCACAAGATTATGCCAAAATTTTTGAGTTTGACAATTTTAAAAGAACACAAAAACATGTTCTCGCTA AAGCTTTAGAATGGGAGCAAGAAAACAGGGAGGACTGCATTCCTGTTGGCTCATATGCTAGGCTGCATATCAAGGAAGTG CCCAGTGCTGTTGCTTCAAAGTTATGTATGCTTGCAAAGACAAGCCCGGTTATAGCATGTGGCCTGTTGAAGCATGAGTC CAAAATATCCGTCCTTCATTTCAGGTGTGTTTATGCTTTATCATTTTTCAATTTTCAGTCAATGCTTTTCAGTGCCCTGA ACATTCAAATTTCAAAAGATGTGTCAAGAGCTGAAATCACTCGTGTTTTGCAGCGTGAAAAAACATGAAACATATGATGC ACCCATCAAATCCAAGGAAGAGTTAATATTTCATGTTGGATTTCGGCAATTTGTTGGCAGGTATGGTATCGATTTGAATA ACCATGGCCAAAAATAGACCATTTCAGGGGAAAAATATAATTTATGTACTTTTTGCAGGCCAACTTTTTCTAGTGAATTC ATAAATACAGACAAGAACAAGATGGAGAGGTTTCTCCATGCTGGGCACTTCTCAGTTGCTTCAATTTATGCACCAATTTC ATTTCCTCCTCTTCCTACGATAATCCTAAAAAGAGATGGAGAGGATGCTGCACCCAGAGTGGCTGCTGTTGGCTCACTGA AAACCGTTGACTCAGATAGGATAATCCTTAAGCGAGTTATTTTGACAGGGTATGTTTGTTGATAGTTTGCAAGTCCCACC ATTGAAAACATTGCATATTTTTTTATTGGTTCCAATGGTCTTTTTGTTTGATGTCTTTCCCATACTGATTCTGGTAAAAA ATGTAAATGTCATTTCATATTTGTATGATATTTGTGACAATCAATAATAGAATTTCTGTTTCGCTTATTTGAAGTTTATA AATATTTTATGGTGCAGTTACCCCCAACGAGTATCAAAACGTAAGGCTTCGGTGAAGTACATGTTTTATAATCCTGAGGA TGTTAAATGGTTTAAGGTAAGAAAATGTTACCCAGTTTTTGGAATCATTACATATTGCTTGGATATTTGTGCAGAGTCAA AAAAGAGTTTATTCTCTGCATATTGTTCTCAATTATCACACTGATGAGATTTCTTATTGTGGGCGGTGATTGCAGCCTGT AGAGCTTTATACCAAACGTGGTCTTCGTGGCCGGATTAAGGAACCTGTTGGTACACATGGTACGTTAGTTATGTTAGAAA CCTTTACCATTAATTTTATGATAAACATTCTGGTGGCTACTTATTTTAGGGAGAAAACAGAGTATATATTGGTAGTCAAT GATGGACTGATGCATTTCATGATTTCTCATCCTTGACCCATTGTTCATACTGTTTACCTTTATTTTCTTATGTTGGAAAA TTCCTTATCCATTGGGGGATTTTGGTGTACCAATGACCGGAGAGGTTCTGAAACTGGAACTCTCCGGAGCTGAGAGGTCA AGGGGTGACGGCGGTGACATCGCCGGCGCTTTTCAGGTGTACGAAGGTGGGTTGGGGAATATGATGAACAGGGTGAGTTG GGGAAGATGAAGAGGTTATAACTTTACATTTTTATCCTTTCTGTCATCATTCAATCCTAACCATCAATCAAAAGAATATT CCAAGATTCTCAGATCCAACGGCATATGATGATGGTCCACCGGTGGACCAATTTTAAAGTTGTCCACCCTAGTGGGCACC AAAATCCCAATGACCACCCCTTACTCCATGATGATCTTGTGCTTGGATTAGAGTAGTATATAGGGACTTGATGGGAAAAT TTAAACTAGTTAGATAAAATACGATTAAGATCATTACATCTGCTCCACTGTTGAATATTGATTGCAATAGTTTGCTTGCG GGAGTAATGTTACTTGACTCTTGTAAACACAACTGTACTCACTTCTTAATTTAAGTTCAATTGGTTCTGCATGAACATTT TATGTTGAGCCCATAGATTCTTGGATATTTGTGCTTCTGTTTGAGATTTTTGCTGGAAGCACTATCTAGTGTATTGTAAT TATATGTTGGAGTGTGGTAAAAATGAAAAGGGTGGACGAGGTGTGGAACTGCGGATGAGGTGGCGCAGATGAAAAAGGTG AAGATATGATATCCTTTGGGTTTGACAAGTGAAGATTTAAACTTGACAAAACAAATGACAATGTACTTTATAGCTTGATT TGGTTAGCAAGTATTTTATGTTTTTCGTTTCACATTTCAGCTTGTAGCCATTGATATTCAAATATACATGAAATGCATGA TGTTGATCATACTTTATATTGTTTCCCAGGAGCAATGAAATGCCTTCTGAACGGCGTTCTTGAACAGCGTGATACTGTGT GTATGAATTTATTCAAACGTGCATACCCGAAGTGGCCAAACTATCATTTTCCTTTAAATTAGAGCTCTGATGGGATGGCA GTTGAATTCTCTTGGTCAAGTAATTCAGGAGAATGCCAATTGTATATTGATCGGGAATGAAGCTCTGGTTCAGATTGACT TCCTTTTATGGAAGATGCAGTTTATATATAGTTTATAACCTTATTTTTAAGGGGGGGAAGATTTTGATGGCCAGGTCCCC CCCTGCTCATGTGCAATATGGGAGAAGTTAACAGTATATCAGAGTTTCTTATTAATTTTTTTTTGGGTATTTGCATGGAA AACTAGAGGTCTGTAGTAAGGTATGAACGATATCTTAGCTGAAAGCTTATTTAAATTCAGGTAACTTATGTAGTAGGGTG TATGGAAGCACCTTGTGTTGGTACTGATTGGGGGTCAAGCTGCCAAATGCATCCAGTTGAATGAGTTT
CDS sequence (LotjaGi1g1v0435400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGGGTCGCGAGTTCAAGTCAACAAGGCTCACAAGACCCGCTTCGCTTCTAAATCTTCTCGCAATCTTCATAAAAC CGCTGGCAAAGATAGAATTGCAAAATCAGAGCACAATGTTGGCAAAGGAGCTCGTGCGGCTAGAATTCAGAGAAGTAAAA TGATACGCGAGCAAAAACGAGCTGCTGTTTTGAAAGAAAAAAGAGAGCTCAGTGGGTCGAGAAGTCCGCCTCGAGTTATA GTTCTCTTTGCTCTTGCTGCTTCAGTGGATATAGATTCAGTTGCAGATGATCTCTTGTCATTATTATCTAAAGATTCTTC TGTAGCGCTGCCGGGAACAGTCGTGTCCTCTGAATATAGGACACGAATAACGTTACTAAAAGCCCCTCATGGTGATCTAC AATCATGCATGGAGATGGCTAAGGTTGCTGATCTAGTGGCTTTTGTGGCCTCAGCAAGGTCTTCGTGTGAAGAAACTGAT TCTTGCTACTTCGATTCCTTTGGAAATCAATGCCTTTCTGTATTTAGGTCTCTTGGTTTACCAAGCACTGTTGTCTTTAT TCGTGATCTACCCACTGAGCTCAAACAAAGAAATGAACTAAAGAAGATGTGCACTTCTAGTCTTGCCTCTGAGTTTCCTG AGGATTGCAAATTTTATCCAGCTGATACCAAGGATGAATTACACAAGTTCTTGTGGCTCTTTAAAGAGCAAAGGCTTAAA GTTCCTCATTGGAGAACTCAACGATCTTACCTTATGGCTCAAAAGGTCGATGTAGTGTATGATGGCCATTCTGAAAAATC CACCCTCCTTCTCACTGGTTACCTTCGTGCTCGTAGCCTCTGCGTGAACCAACTGGTTCATGTTTCAGGTGCAGGAGATT TTCAATTGTGTAAAATTGAAGTTCTTAAGGATCCCATTCCTTTGAATTCAAGAAAAAATCAGGACTTGATGGATTCAGAT GAAATGCATGATGTGGAGGTCACAGGCTCCCTGTTTCCAGATCCTCAAAACCAGGAAGCTTTAGTTGTCGAGAATATACC TGATCCTCTTGCGGGAGAGCAGACATGGCCAACAGAAGCTGAAATTACCAAGGCTGATGAAGATCGAAACCAAAAGAAGA TAAGAAAGAGAAAACTTCCTCAAGGCACTTCAGAATATCAGGCTGCATGGATTGTCGATGATTCTGATGAGGACTCAGAT CTTGACAATGATGATGACGATGGTATGGTGATGGATGAAAGCGAAGATGGGTTTCCAGGTCAAGAGGGAAATAAGTATTC AGAATTTGATGGTGATGGAGCTTCACTAAGATTTGGAGATTCTGACGAAGAAACTGACAATGATTCAGTTATGATGGAAG TAGATATCTTGACTAGAGAGAAGATACAGGATGAACTTAAGGAAATTAAAGAAGCGCATGCTGCCGACGAGGAATTTCCT GATGAAGTGGATACACCATTGGATGTCCCTGCTAGGAAGCGGTTTGCAAAATATAGGGGACTAAAGTCCTTTAGGACGTC TTCATGGGATCCTAAAGAATCTCTACCACAAGATTATGCCAAAATTTTTGAGTTTGACAATTTTAAAAGAACACAAAAAC ATGTTCTCGCTAAAGCTTTAGAATGGGAGCAAGAAAACAGGGAGGACTGCATTCCTGTTGGCTCATATGCTAGGCTGCAT ATCAAGGAAGTGCCCAGTGCTGTTGCTTCAAAGTTATGTATGCTTGCAAAGACAAGCCCGGTTATAGCATGTGGCCTGTT GAAGCATGAGTCCAAAATATCCGTCCTTCATTTCAGCGTGAAAAAACATGAAACATATGATGCACCCATCAAATCCAAGG AAGAGTTAATATTTCATGTTGGATTTCGGCAATTTGTTGGCAGGCCAACTTTTTCTAGTGAATTCATAAATACAGACAAG AACAAGATGGAGAGGTTTCTCCATGCTGGGCACTTCTCAGTTGCTTCAATTTATGCACCAATTTCATTTCCTCCTCTTCC TACGATAATCCTAAAAAGAGATGGAGAGGATGCTGCACCCAGAGTGGCTGCTGTTGGCTCACTGAAAACCGTTGACTCAG ATAGGATAATCCTTAAGCGAGTTATTTTGACAGGTTACCCCCAACGAGTATCAAAACGTAAGGCTTCGGTGAAGTACATG TTTTATAATCCTGAGGATGTTAAATGGTTTAAGCCTGTAGAGCTTTATACCAAACGTGGTCTTCGTGGCCGGATTAAGGA ACCTGTTGGTACACATGGAGCAATGAAATGCCTTCTGAACGGCGTTCTTGAACAGCGTGATACTGTGTGTATGAATTTAT TCAAACGTGCATACCCGAAGTGGCCAAACTATCATTTTCCTTTAAATTAG
Protein sequence (LotjaGi1g1v0435400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGSRVQVNKAHKTRFASKSSRNLHKTAGKDRIAKSEHNVGKGARAARIQRSKMIREQKRAAVLKEKRELSGSRSPPRVI VLFALAASVDIDSVADDLLSLLSKDSSVALPGTVVSSEYRTRITLLKAPHGDLQSCMEMAKVADLVAFVASARSSCEETD SCYFDSFGNQCLSVFRSLGLPSTVVFIRDLPTELKQRNELKKMCTSSLASEFPEDCKFYPADTKDELHKFLWLFKEQRLK VPHWRTQRSYLMAQKVDVVYDGHSEKSTLLLTGYLRARSLCVNQLVHVSGAGDFQLCKIEVLKDPIPLNSRKNQDLMDSD EMHDVEVTGSLFPDPQNQEALVVENIPDPLAGEQTWPTEAEITKADEDRNQKKIRKRKLPQGTSEYQAAWIVDDSDEDSD LDNDDDDGMVMDESEDGFPGQEGNKYSEFDGDGASLRFGDSDEETDNDSVMMEVDILTREKIQDELKEIKEAHAADEEFP DEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPQDYAKIFEFDNFKRTQKHVLAKALEWEQENREDCIPVGSYARLH IKEVPSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSVKKHETYDAPIKSKEELIFHVGFRQFVGRPTFSSEFINTDK NKMERFLHAGHFSVASIYAPISFPPLPTIILKRDGEDAAPRVAAVGSLKTVDSDRIILKRVILTGYPQRVSKRKASVKYM FYNPEDVKWFKPVELYTKRGLRGRIKEPVGTHGAMKCLLNGVLEQRDTVCMNLFKRAYPKWPNYHFPLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 48 | 48 | - | – | |
| PANTHER | 2 | 786 | 785 | 0.0 | ||
| PANTHER | 2 | 786 | 785 | 0.0 | – | |
| MobiDBLite | 24 | 48 | 25 | - | – | |
| ProSiteProfiles | 76 | 249 | 174 | 9.411 | ||
| SMART | 226 | 306 | 81 | 1.2E-22 | ||
| Pfam | 226 | 305 | 80 | 3.4E-18 | ||
| MobiDBLite | 386 | 431 | 46 | - | – | |
| MobiDBLite | 391 | 413 | 23 | - | – | |
| SMART | 482 | 777 | 296 | 1.1E-152 | ||
| Pfam | 483 | 779 | 297 | 1.8E-114 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Ribosome biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. |
Expression pattern of LotjaGi1g1v0435400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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