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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0477000 |
| Transcript ID | LotjaGi1g1v0477000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT2G45910.1 U-box domain-containing protein kinase family protein; Swiss-Prot: sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33; TrEMBL-Plants: tr|Q2HTK4|Q2HTK4_MEDTR Protein kinase; U box; Found in the gene: LotjaGi1g1v0477000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98867800..98873888) extracted from Lotus japonicus Gifu genome v1.2.
ACTGCAATGATATCGTATTAGAAGTTAAGACAAGGTTGCTCTTTACAGAGGAAACGATGTATTGACTTCAACAAAAACTC CCAACCACACGGTTCTCCCTTTTAGCTCTCTCATGCCTTCTGTAATCACTCTGAAAGTTCAAAGCTTTGATGTTAACTGT TAATGGAGCCATCACCCTCTATGTGTTTGTGAAATTGCCTGAACAAAAAAGCTAAGGTTAACTTTTTTTTTTTCCTTTTC CAATTTTGCTCTTGGGGGGTAATTTTCAATTTTCTTGAGATCCCACACAGAAAGTTTCAATCTTTGGTGGGTTTTCTGAG TTCCTGAGAGAGGATTTTTGATGGGTTTGTGAGATTTTGATGATTAAGTTTCTGGGTTGATAGCAAAATCTGTGATTGTG TGTGTAAAGAGAGTTTTTTTTTATTGAATGGTTCAGTAATTCGGAATCTCTTAGCATGGCTGTGGTGTGTCCTGTGCCTG CAACAACACAAAGGAGTGGTTCTGTGAGTTCTGTTGGTGAAATTGTGGGGGAAATTGCAGAGGAGCCTAATCCAACTATG GTTGATGAACCAATCTATGTTGCTGTGTCAAAGGATATAAAAGAGAGCAAATTGAATCTGATATGGGCCATTCAGAACTC TGGAGGGAAGAGGATTTGCATCCTCTTTGTTCATGTGCCTGCAACAATGATACCCTTGAGTAAGTTTTCTGTGTACTATG TGTGTGTGTGTATATTTATAGTTATATACTATATGCTTCTCTATATGTTCTTGTTGTTTGATAACTTTAATTTCATAGAT TCTCTTGAATGGAACTTTACACTTGCGAAATTGACTCAACTTGGACTCAATATTTCGCATACTCTTTGATGATCAATACT TTTGAAATTATCTGATGAATTGAATTAGAACGAAACAAGGCCACCAAGATAATTAGGCCTTATTTTAAAATCTACTTTTA TGATTCATATGTTGGCTGCCCTTTAAATTTTCATTGTTTAAAGATTTACTTGTCTAGTTTATGATGTTGTTGGGACTGGG AGGTATTTGTCATGCTGATGATTTTCATTGAAGTAGTTAATTTCAAGAACTAAATTTAGCTATAAATATATATAGTAACT CTTGAATATCTCTTCTGCGCTGTGTTTGTCATTTGCAGAATGTTCAGTTTCTGATAAGGGTTTATAACTCTGATTTTAAC TTTCTTGGTTATAGTGGGTGCCAAATTTCCTGCAAGTTCACTGAAAGATCAGGAAGTCCGAGCATACCGGGAAATTGAAA GGCAAAACATGCACAAGACTCTGGATGAGTATCTTCGTATCTGTCAACGGATGGGGGTAATTGTTGTCGTAATTTGATAC ACATGTATTTTGGAAGTTTAGTTTTCCACTAACAACTTTCTGATACAGGTGCGAGCAGAAAAACTGCATATTGAAATGGA CAGCATTGAAAGAGGAATTCTAGAACTTGTCTCCCAGTATGGTATCCGAAAGCTTGTTATGGGAGCAGCATGTGATAAGC ACTATTCTAGGTAAGAAGCCAGATAAAAACCCCAAACTACATTTTTATTTTGTCATTTTCGCTGGAAATTCAATGATTAT GATGTGAAAGTACTGAAGATGGTATATTAGTTCCACTAATCATGTACGGCGCAAATAGCTACAGTAGTTGCCGGTTCTAG GCTTGGAATTTTTCAGTGAGGCATGTTATATCTTCTTTGTTTTCAGTAGCTAGTTCCATGACTTTCTAAGCTATGGAGCT GGGACTATGTCTCTCCCCTTTGATTCTATTTTCGCTAGGGTGTTTTGGTTGCGTGGAGCCATCGTAGTCCTTTCCCCAAT CTATGTCAACTTGTAATTTATACAGAATTTATGCTTTAGTTCATAAGTTCTGATGATCAACTAACTATTTGTATCTTGAG AATTTTCTAATCTCTATGTCAGTTTTGGTGAAATCAATATTATGTTTTCATTGAGCTCTCGCATGACATTGCAGGAGAAT GGTGGACCTCAGATCTAAGAAAGCCATCTATGTATGTGAACGAGCTCCAGCTTCTTGTCATGTACAGTTTATCTGCAAAG GGCACCTTATACACACAAGGTACAGGACCTCCTGAAATATTAGTGTGTTCTGATACACAAGGGATTTAGAATCACATGAA AGATAAATGTTACTCAAAAGGAAGGTTTGTAGTTGCGACTTGCGAGGATTAATTAGCACAATATTTGATAATTTAAAGGA AAAACTTATTTCTTTATTTAACAGTCAGCTTTATCATACTATGGTTGTCATGCTCTTGGTTTTTATTAATTTGGGCACTG AATTACTGATGTAAGTACCATGTCAACACAGGGATCGCAGTTTGGATCAACGCAATGCCGAGGCTGCATCTCTTTTGGTG CAGCAAGTACCAAACTTGGTGAGATCTTTGAGATCTCAATCACTGGGGCAAAATCTTCAGGCGAGTTCACATAATGCTGC TCAAGAGTTATATCGCAGAGCAAGATCTACCAATGATATCGCAGTTTCTTCTCCCGACGACACTGAAGGTTTTTCAACCC CACGTAATAGGGTGGGTACAGAAGTAAGTTCTGATGAATCAGAACGACCATCAAGGAGGAGTCCTTCAGGATTTTCAACA TGCTCTGACGGTGCAATTGAAGCAGCATTGACCCCGAATTTGATTAATGAGATCAGTGAGAATGTAATAGATTTGACTTT GAGTCACCTGATTAAAGAGGATCTTCGTCATTCATCTCCTCCCAGTGTACTGGTACACATTCTTTTTTCTTTTAATATTG TTTGTGCCTGTCAGGGAATGTGCATATTTTTGCATGTTGACTTTTTCGCAATTGATGAGAAACAATTTTATGTAATAATA GAGTTTTTCTAATACCAAATTGAATAATGGTTGAACTCTAGCAGGATGGTGGAATGAATGATACTCTCTATGACCAACTT GAACAGTCTATGGCTGAGGCTGAGAATGCTACGCGACATGCATACCAAGAAACTTTTAGGCGTGGGAGAGCCGAAAAAGA TGCCATTGAAGCTATACGCAGGGTAACTGTTCTGTTGTGGAGTGCTTCTTATACTTCTTCGATGTATAGATGATTGTTTT TGTGATGTGAATAGTTAATTTTGCCTTTTGCATCAAGTTTCCAAGTTTTAAAAGTCTTCTAAGGCGAAGCAATTATCATA CCCAAAGAGAAAATCAAGAAAGTGAAGGATATATCAATCAACCTTAACCACTGCTAAGATCATTGGAATGAATAGGCATA ATTTTAGGTTGTATTATCTATTATCTATAGTCACATGCCAATATTGATACACCCTCTAACCTTTTTTGCCACAGGCTAAA GCTGCTGAAAGCTTATATGCAGAGGAGTTGAATCTGAGGAAAATGGCTGAGGAAGAACTAGAAACAGAAAAAGAAGAACT TGAGAATTTGAAGAGCCAGGCAGACAAGGTTAAGGAAGAACTCCGGCTTGCCCAGGATCAGAAGTCATCACTAGAGAGTC AACTTGCATCATCTGAACTTATGGTAAAGGAGTTGGAGCAGAAGATTATATCTGCTGTGGATCTTTTACAAAACTACAAG AACGAACGAGAAGAATTGGAGGTGCAGCGTGATAGTTTATTGAGAGAGGCAGAAGAGTTGAGGAAAAAACAAGGAGAGGC CTCAAGCTCCCACGTGTCTCAATTGTTTTCAGAATTCTCATTTTCAGAGATCGAAGAAGCAGCAGGTAACTTCAATCCAT CCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATTTAAAGGTGTCCTTCGTCACACTGAGGTAGCTATAAAAATGTTG CACCCCAACAGCATGCAAGGACCCTTGGAGTTTCAACAGGAGGTGAGATGGTTTGACTTATATGTAATAGTTTGAGCATC ATCTGCTTCTGGTCAACAATAATATTCTTTGTCCACAGCAGATCGTCCTTAACTGTTCTTGCTTGCAACTTGCCGATTGC AATCAAAATAATGAATACCAGTTAAAAAGAAAACTGACAAGAATGTGCAGCATCAATTTTTTAAAGTGGCATCAATTTGT TAAAAAATCCCTACTCTGGTACTTTTCATGTTTCTGAAAACTTAGTTGCTCCTTGTCTTAATATATCATCTATTGTCTCT AGAAAGTCTGAAAGAAGAGAAATATGATCCAGCTTTGTAGGGAAAAAGGATTATTTTGACTCTGCTTTTGGTTTTGTATC AGGTTGATGTCTTGAGCAAGCTAAGACATCCCAATCTTATCACACTTATAGGAGCCTGCCCAGAATCCTGGGGCCTTGTC TATGAGTATTTACCGAATGGTAGCCTTGAAGACCGTCTTGTTTGCAAGGATAATACACCTCCGTTATCATGGCAAACTCG GATTCGCATTGCTGCTGAACTGTGCTCTGCCCTCATCTTTCTCCATTCCTGTAAACCTCACAGCATAGTGCATGGTGACC TAAAACCCTCAAATATTCTCCTAGATGCAAACCTTGTTAGCAAGCTTAGTGACTTCGGAATCTGTCGCATATTATCTAAT CGCAGTTCTAGTGATAATGCTACACAGTTATGGAGAACTGACCCAAAGGGAACTTTTGTATACATGGATCCTGAATTCCT TGCTTCCGGGGAGCTTACTCCAAAGTCGGATGTTTATTCATTTGGAATCATACTGATGAGGTTGTTGACTGGGAGACAAG CCTTGGGAATATCAAAGGAGGTGAAATATGCAGTAGATACTGGAAAGTTGAAATCCTTACTGGATCCTTTGGCTGGAGAC TGGCCCTTTGTGCAGGCCGAACAGCTGGCTCACTTGGCCTTGCGGTGTTGTGAGATGAGCAGAAAGAGCCGTCCGGACCT GTGCTCGGATGTTTGGAGGATACTGGATGCAATGAGGGCTTCTTCTGGAGGCACAAATTCCTTTGGACTAAGTTCTGAAG GGCTCCACCAACCTCCTTCTTATTTTATTTGTCCAATCTTCCAGGTAACTGGCTCTGTCTGCCTTTGTTTTTCAGTTTCA GTTTTCAACTCATTGAAGATGTTATGTCCTCATGATCTTTTAGGATCTCCAGCACAATGATCACTTGTCTAAGAAAATGA AATTCATTCCAGTCCTCATTTTTCATTGCAAAGTTGGTCAAAATTTTATACTTGCCTATCTCCATTGCGTATGTGTAATT TTTAATTTTGTTATCTTTATGTTCTTAACTTGCACAGCATTTTCCTAACCTATGGAATGATATAGCCTTGGATACAGAAC TTTATGTAAGAAAGCTTCCATTAATTATCGTAAAAAATATAAATATAAAATCATTCATGTGTCTTCACCAAAAAACTTAA TTTTTTTGGGATAGTTGGTTCCTGACATAGTATCGGAGCCTTTGTGACCGAATGGTTTAGAGTTCAATCCTTCGTGCCAC AATTTTCTAAACAAGAATATTGAATATCAGTACAAGGCAGATAAACCTGTGCATTGTACACGCTTCAAGCCTTATAAGTT CTTACGTGAGAGGGAGTCCTACAAAATATCAAATCATTCGCGTGTCTTCACCTAACAGTATAAGTTTTTGAGATAGTTAG TTCACGACTAAATAATGTTCATACTTTGCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTTCACTTATGAAG CTGAGGCTATACGAGGATGGCTTGACAGTGGTCATGACACTTCACCAATGACAAATAGTAAGCTTGCACATCAGAATCTT GTTCCCAACCGCGCCCTTCGCTCTGCAATCCAGGACTGGCTTCAAAGTCAATGATCAAGCTTATTGTTTTATCAATTTTT ATTGTAGTATATATATATCTACCTGTTTATAACATGTCTAGGAAAGAAAGCTGTCTTTACATTTTTTTAAACCTTCTATC AGTTTTGTTTCTTGCAGTCGTATGGAATCAAATTGTATACCTATCTCTTATATAGGTTAGATTACCAAATGGTGAATCTT TAGTCATTGTAAAAAAAACATAATAATATTAAAAGCATGTATACGTCAAAACAGTTTTCGTGTAATTATCTCTCATATTT GGTAAATTT
CDS sequence (LotjaGi1g1v0477000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGGTGTGTCCTGTGCCTGCAACAACACAAAGGAGTGGTTCTGTGAGTTCTGTTGGTGAAATTGTGGGGGAAAT TGCAGAGGAGCCTAATCCAACTATGGTTGATGAACCAATCTATGTTGCTGTGTCAAAGGATATAAAAGAGAGCAAATTGA ATCTGATATGGGCCATTCAGAACTCTGGAGGGAAGAGGATTTGCATCCTCTTTGTTCATGTGCCTGCAACAATGATACCC TTGATGGGTGCCAAATTTCCTGCAAGTTCACTGAAAGATCAGGAAGTCCGAGCATACCGGGAAATTGAAAGGCAAAACAT GCACAAGACTCTGGATGAGTATCTTCGTATCTGTCAACGGATGGGGGTGCGAGCAGAAAAACTGCATATTGAAATGGACA GCATTGAAAGAGGAATTCTAGAACTTGTCTCCCAGTATGGTATCCGAAAGCTTGTTATGGGAGCAGCATGTGATAAGCAC TATTCTAGGAGAATGGTGGACCTCAGATCTAAGAAAGCCATCTATGTATGTGAACGAGCTCCAGCTTCTTGTCATGTACA GTTTATCTGCAAAGGGCACCTTATACACACAAGGGATCGCAGTTTGGATCAACGCAATGCCGAGGCTGCATCTCTTTTGG TGCAGCAAGTACCAAACTTGGTGAGATCTTTGAGATCTCAATCACTGGGGCAAAATCTTCAGGCGAGTTCACATAATGCT GCTCAAGAGTTATATCGCAGAGCAAGATCTACCAATGATATCGCAGTTTCTTCTCCCGACGACACTGAAGGTTTTTCAAC CCCACGTAATAGGGTGGGTACAGAAGTAAGTTCTGATGAATCAGAACGACCATCAAGGAGGAGTCCTTCAGGATTTTCAA CATGCTCTGACGGTGCAATTGAAGCAGCATTGACCCCGAATTTGATTAATGAGATCAGTGAGAATGTAATAGATTTGACT TTGAGTCACCTGATTAAAGAGGATCTTCGTCATTCATCTCCTCCCAGTGTACTGGATGGTGGAATGAATGATACTCTCTA TGACCAACTTGAACAGTCTATGGCTGAGGCTGAGAATGCTACGCGACATGCATACCAAGAAACTTTTAGGCGTGGGAGAG CCGAAAAAGATGCCATTGAAGCTATACGCAGGGCTAAAGCTGCTGAAAGCTTATATGCAGAGGAGTTGAATCTGAGGAAA ATGGCTGAGGAAGAACTAGAAACAGAAAAAGAAGAACTTGAGAATTTGAAGAGCCAGGCAGACAAGGTTAAGGAAGAACT CCGGCTTGCCCAGGATCAGAAGTCATCACTAGAGAGTCAACTTGCATCATCTGAACTTATGGTAAAGGAGTTGGAGCAGA AGATTATATCTGCTGTGGATCTTTTACAAAACTACAAGAACGAACGAGAAGAATTGGAGGTGCAGCGTGATAGTTTATTG AGAGAGGCAGAAGAGTTGAGGAAAAAACAAGGAGAGGCCTCAAGCTCCCACGTGTCTCAATTGTTTTCAGAATTCTCATT TTCAGAGATCGAAGAAGCAGCAGGTAACTTCAATCCATCCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATTTAAAG GTGTCCTTCGTCACACTGAGGTAGCTATAAAAATGTTGCACCCCAACAGCATGCAAGGACCCTTGGAGTTTCAACAGGAG GTTGATGTCTTGAGCAAGCTAAGACATCCCAATCTTATCACACTTATAGGAGCCTGCCCAGAATCCTGGGGCCTTGTCTA TGAGTATTTACCGAATGGTAGCCTTGAAGACCGTCTTGTTTGCAAGGATAATACACCTCCGTTATCATGGCAAACTCGGA TTCGCATTGCTGCTGAACTGTGCTCTGCCCTCATCTTTCTCCATTCCTGTAAACCTCACAGCATAGTGCATGGTGACCTA AAACCCTCAAATATTCTCCTAGATGCAAACCTTGTTAGCAAGCTTAGTGACTTCGGAATCTGTCGCATATTATCTAATCG CAGTTCTAGTGATAATGCTACACAGTTATGGAGAACTGACCCAAAGGGAACTTTTGTATACATGGATCCTGAATTCCTTG CTTCCGGGGAGCTTACTCCAAAGTCGGATGTTTATTCATTTGGAATCATACTGATGAGGTTGTTGACTGGGAGACAAGCC TTGGGAATATCAAAGGAGGTGAAATATGCAGTAGATACTGGAAAGTTGAAATCCTTACTGGATCCTTTGGCTGGAGACTG GCCCTTTGTGCAGGCCGAACAGCTGGCTCACTTGGCCTTGCGGTGTTGTGAGATGAGCAGAAAGAGCCGTCCGGACCTGT GCTCGGATGTTTGGAGGATACTGGATGCAATGAGGGCTTCTTCTGGAGGCACAAATTCCTTTGGACTAAGTTCTGAAGGG CTCCACCAACCTCCTTCTTATTTTATTTGTCCAATCTTCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTT CACTTATGAAGCTGAGGCTATACGAGGATGGCTTGACAGTGGTCATGACACTTCACCAATGACAAATAGTAAGCTTGCAC ATCAGAATCTTGTTCCCAACCGCGCCCTTCGCTCTGCAATCCAGGACTGGCTTCAAAGTCAATGA
Protein sequence (LotjaGi1g1v0477000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVVCPVPATTQRSGSVSSVGEIVGEIAEEPNPTMVDEPIYVAVSKDIKESKLNLIWAIQNSGGKRICILFVHVPATMIP LMGAKFPASSLKDQEVRAYREIERQNMHKTLDEYLRICQRMGVRAEKLHIEMDSIERGILELVSQYGIRKLVMGAACDKH YSRRMVDLRSKKAIYVCERAPASCHVQFICKGHLIHTRDRSLDQRNAEAASLLVQQVPNLVRSLRSQSLGQNLQASSHNA AQELYRRARSTNDIAVSSPDDTEGFSTPRNRVGTEVSSDESERPSRRSPSGFSTCSDGAIEAALTPNLINEISENVIDLT LSHLIKEDLRHSSPPSVLDGGMNDTLYDQLEQSMAEAENATRHAYQETFRRGRAEKDAIEAIRRAKAAESLYAEELNLRK MAEEELETEKEELENLKSQADKVKEELRLAQDQKSSLESQLASSELMVKELEQKIISAVDLLQNYKNEREELEVQRDSLL REAEELRKKQGEASSSHVSQLFSEFSFSEIEEAAGNFNPSLKIGEGGYGSIFKGVLRHTEVAIKMLHPNSMQGPLEFQQE VDVLSKLRHPNLITLIGACPESWGLVYEYLPNGSLEDRLVCKDNTPPLSWQTRIRIAAELCSALIFLHSCKPHSIVHGDL KPSNILLDANLVSKLSDFGICRILSNRSSSDNATQLWRTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILMRLLTGRQA LGISKEVKYAVDTGKLKSLLDPLAGDWPFVQAEQLAHLALRCCEMSRKSRPDLCSDVWRILDAMRASSGGTNSFGLSSEG LHQPPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDTSPMTNSKLAHQNLVPNRALRSAIQDWLQSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 873 | 856 | 0.0 | – | |
| PANTHER | 18 | 873 | 856 | 0.0 | – | |
| CDD | 39 | 192 | 154 | 3.80853E-49 | – | |
| SUPERFAMILY | 51 | 155 | 105 | 9.21E-6 | – | |
| MobiDBLite | 250 | 274 | 25 | - | – | |
| MobiDBLite | 250 | 297 | 48 | - | – | |
| Coils | 347 | 367 | 21 | - | – | |
| Coils | 385 | 489 | 105 | - | – | |
| Gene3D | 487 | 589 | 103 | 2.1E-25 | – | |
| SUPERFAMILY | 494 | 773 | 280 | 1.73E-67 | ||
| ProSiteProfiles | 517 | 784 | 268 | 33.474 | ||
| SMART | 517 | 784 | 268 | 6.9E-34 | ||
| Pfam | 521 | 772 | 252 | 4.0E-42 | ||
| ProSitePatterns | 523 | 544 | 22 | - | ||
| Gene3D | 590 | 793 | 204 | 2.0E-48 | – | |
| ProSitePatterns | 635 | 647 | 13 | - | ||
| SUPERFAMILY | 798 | 872 | 75 | 2.83E-25 | – | |
| ProSiteProfiles | 803 | 874 | 72 | 39.002 | ||
| Gene3D | 803 | 874 | 72 | 6.5E-29 | ||
| Pfam | 805 | 873 | 69 | 6.2E-19 | ||
| SMART | 807 | 870 | 64 | 6.4E-30 | ||
| CDD | 808 | 849 | 42 | 3.41806E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi1g1v0477000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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