Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0488800 |
| Transcript ID | LotjaGi1g1v0488800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA-binding KH domain protein; TAIR: AT5G15270.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4; TrEMBL-Plants: tr|A0A0S3RSA7|A0A0S3RSA7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0488800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100175854..100185921) extracted from Lotus japonicus Gifu genome v1.2.
GTAAATAAAAAAATAGAGAGGACAAGTTGGTGATTGTACAGTATTAAAACCCTATATTTTCCTCCCCTGCAAAACTAGCT GGTCTTCTCTTCTACTGAACCAAACCACCAATGTCGCAGCAAGGTCAAATTCCGATAAACCCCATGGTTCCTCAGCAGAA TCCCATGGCACCCATTCCCATGCAGGTTCCTATGCACATGCAAATGCAGATGCAGATGCCCAACATGCCCATGCCAATGC ATATGCCCATGCAGATGCCCCTCCACATGCCCCTCCAGGTTCCGTTCACCGGCTACGACCCAGCTGGGAACCTCATCTAC GACCCATCGGGGAACCCCGGTTACGGGAAGCGCCGCCGCGAGGATGAAGCTCCGGGCACCGTTACTGAGGGGGATCAGTC TGCGGCCAAGCGCGTGAAGGGGCAGGACGTGATATTCAGGATCGTCGTGCCGTCGCGGCAGATCGGGAAGGTTATTGGGA AGGAAGGTTGCCGCATACAGAGGATTCGAGAGGAGACCAAAGCCACCATCAAGATAGCTGACGCTATTGCTGTGAGTCCC TTATTCCCCCCTGAATCTGTTTGGTAGCTGAGAAAGCGATGATGAAAGAATTAGGGTTTTGCTTTTGGGATTTTAATTAT GAATTTGTGTTTGTGGCTTTTGGGGAGTTAAATTGATTTTTTGGTTGGGAGCTGTTTGGTAATTGATAAAGCTGAGGGAA AAAATAGTTGTTGATTTATTTTAAAATTATGTGTAGAACTAATTGCTGTATCTAATTTGTGATTTGGGGATTGTGAGGAG TTGATTTGATTTGTTTTCATTTATGGTGGGGCTTTCTAGCTGAGAGAGTCGGAGGAAAATATGGATGCAATGGGTGAAGT TAGGACGGTTCTGTATTTAGTGGTTTCGGGTCAGTACTGAACTGAACTCTTTCTCTTTGGTAGCTGAGGAAACAAAAAAA TCAGCGGAAGGGAAGGTCATGCCCCGTTAGCAGCATCCCTATAGTTTCCACTACCCCTTGGGACTCCGAGTTTTAAGCTC TTGATCATAGTTACCTGGTTCGCGGTACACTCCGGTACGTGGTACGGGTACGGGAACGTGGAACGCGACCGGTAAAGTAT TGGGTACAAGGGGGGTATACATAGTCGGTTTGCTATTTAGGTTCACGGTACATTCTAATTTATTAACTGGTACGCTCATG TAAATTTTTTCTCAAAAAATGAAGAAAATAAGTAGCAATTTATAAGTAGCACATGTATATGAATTAGACTACTCACTTTC CAGTTTTCCAGCTCCTAAAAATAAGACTATTCACTTTCTAATTATTATATATTTTCTATGTAATCAGATGATTGGATTGA ACCGCACATTGGTAAGGAAAAGAAGTTTATAGCCGTTTATAATTGAACAAATCACTCTAATAACTTGGCACATTGAATTA CAAATTTTCTAGGTAAACAGATGAGTCTTCATTTTCCAATACTTATTTAAGAATTTTCTATTATTGATAATTGAAAAGTC ATTATAGCCATGATATTAGTATAACTTATCTGCAGCAATGAATGCTTTGCTTTACGTTTCCTAGTGGTGCAAGATTCTAA AATTTAAACTCTAAACCATTTATTGTATCATTAAAATCAACTTAGAAAATGTTTTCGGAACACTAGACTTAGAGTACCAG TACGTGAATTGCAGTGAACCGGTACGTAAATGTACCGCGAACCGGTTCATATGAACCGGAACGCGGTACCCAGGCTAAAT AACGAATTTGGTAACTATGCTCTTGATACCATGATGGAGTTCAAAGTGTTTCATGAATCTAATTTGTTTCATGAAACCCT TTCTCTTTTCTCTTGAACTTCATCATGATATCAATAGCCTAAAATTTGGAGTCCCCTCCTCAACTTCATCATTTTCAAGA GTAAAGGGAAAGGAGTAGTGGAAACCTATAGGGAGGGATGCTAACAGGCCGGACCTTCCGCTGATTTTTTGTTTGCTCCG CTACCAAAGAGATGTCATAAACAGAAAGAATGAATTCAGCACAAGCCCGAAACCACTAAATAGTAAATACTGAACAGTCC TAACTTCGCTCAGCTACGAAACACACGCCAAAAATGAGAACACATCAATTCAACTACTCCTAAGCCCCAAATCCCAAATT AGATAACTCTAACAAACTATGTGACCACTGTACAACAGCTCTAACTAATGCTAACAGAAGCTTAACTACTCTAAGTAATT ACATTTCAGTGTGTGTATCATAGACATATAGTCCGACAATAAATAGCCCCCATTTCAATGATTGTTTTTAAGACCTGATT ATTATGCTTAGGGTTTAGAAGTTCTTTATAAGGGAATGCATTGAGCCGGCTTACTACACTAACCATTAGCTTCTGGTAGT TTGTAGCCTGCCATTCGAATTCCGCCACCCCATTTCCTTCAAATGACATGTTAAAACTTAAAAATTCTGTCCACCTTTCC ATCTTGGCACTGTGAGGCTGCCATTTGGCAGCACTCAAACAAGTAGTTGGAGCTCGTCCCTATAATTCATATTTTAGGTT TCCCTAATAAAATTCATTCTTTTGTGGTTCCAGTTTAGTAGAGGATTGAAAAAGTTTGATGAGGGTGTCTATTTGTTGCT TTGTGAAGTGAAACTTTCTTTGAGAAGATTTATGACCTTGATCTTCAATCAAGACCTGAATGCTTGAATTTCTCTCATTT ACCTTTAATATTAGGCTTACCATGTGTTTTCTAGCATAGCTCACAGATACGCCATGTCTACTTGCAGTGATCTCTCAATG GTTTCTTTATTTTCTGCCTATTACCATCAGAAGCTGCGCTCTGGAAACAGAGGTATGCCCTGCCCTGACTCCTTGCAGCG ACCAAACCTTGGTTTTTTGGTATTCCACCTATCTCCATCTGAATCTTCCTGCTGGAAAACAAGGCTGAACTCCGATTCTT GATGTTGTCTTTGATCATAATATTTTCTCTTCCTCTTCGCAACTTGTTAGGTAACTTCTCCCATATTTGGGAGTATTTTT TGGCCTAAAATTCTCCCTTTCACTGCATCCTCTGTTGATACCATCAGAAGCTGCGCTCTGGAAACAGAGGTATGCCCTGC CCTGACTCCTTGCAGCGACCAAACCTTGGTTTTTTGGTATTCCACCTATCTCCATCTGAATCTTCCTGCTGGAAAACAAG GCTGAACTCCGATTCTTGATGTTGTCTTTGATCATAATATTTTCTCTTCCTCTTCGCAACTTGTTAGGTAACTTCTCCCA TATTTGGGAGTATTTTTTGGCCTAAAATTCTCCCTTTCACTGCATCCTCTGTTGATACCAGCAGAGAACATATAAACTCA ACAATTTTCTTGCCTCTGCAAGTGTCTTGCAATGTCACTTATCCATTCTCACTTAAATCTCCATAACAGAGATCCAATTC TTCCACAATGTTTGCATTTCATTATAGTATGTAGTCAAGTCATGATCCCCTTGCTTGTTGCCAGTTGAGTCCTGAGTACG CATACTTGATATGAGTTCTCCAAATCAGTGTAGGTATTTTTAACTCCTTCCCTCCCCTTCTTGGTAAGGGCTCCATTTAT TTATAAGCCATACAATAGCCATGAATTTTTCCTATCTCCACCCAGTCCAGGTAGGATCTTCTGATGCTGGGTTTAACTTT GTCAGTCATATGTTCCCATTTCTTTTTTTAAACAATTAAAAGCTTCTTAAGCTGCCTCCTTAACTTTAGTTATTTTTTAC CACTCCATTTGTGACCAGTGAATTAGAGACTGTTGGTTGTTGTAGAATATGATGTCAATCCTGGTTATTGTTGTAGCAGG ACTTTGGTCAGCCCAAGCTGTATTGTCAATATTTCTCCGAAGGATGCTAGGCCTTAGTTGGCTCCCACAGAGACTGTTAT TGCTGTACTCTGATAACTCGTGGAGTTCTGTTACCATAGAGAAAAGGAAAATAATTTGTTGAATTATTGGTTACTTTTGT CAACAGAAACTTTAAATACATGGGGGGAGGTGTGGATTATATTCCCTATATAACCTTGTCTACTAGGATTGGAGATAGAA AATATTTATATTTATCTTTAGAAAATCCTAATGTTTATCTGAATTTATCCTATATTTTGTATGTGTATGTGTAAGAACAA ATTTTACCCTATCCATTCCTCTTCATCCTAACTGAAATGTCTGTTAATATTATTGTTTTTGATTTGTGTCAAATGACACG AACTTCATTCAGTTTTGCTGATTAATAATAAAGGGTTAATATTTGGATTGAAGTGCTTGAATTGACATTATAGTTTATGA TCATTAGTTAATTTTAGATACACGAGTCTAGTTATTATTGTTACTTAGACCAATTGGTGTTTACCGTATCCAATCCCATA TTTTCCTTTTGAGCAGAGACATGAAGAACGTGTGATCATTATTAGTTCAAAAGACAATGATGAAAAGGTTACTGATGCAG AGAAAGCTCTTGAGCATATAGCCAATTTAATTTTAAAGGTAAGAGTCCTGATCAATTGAACATTCTTAAGCCTTTTGCTC ATACTTTTTGTAATATGCATAATTAGACATGACCTTTGAAAGATTATTGTGACCTTGAGTTGTAGATTGTGTCATTATGT CCTTTTATAATTTATGCTAAGATCATCGATTCGGTGGACTTTTTTAAGTTATATACTAACACATTTCAAAGCCAGATTTT TATTTTTATTTTGGAAATGAATCACTTTATAAAGTTTTATTAGTTTTAAAATTTTAATATTAATTCTGAATTTTTTTTGT TTTCTTTTATGAATATGTGTATGATTTAAATAGTTCATTGTATGCCACTATGCCTGTATGATATTTTTCTTATAAATTGC TCTACCCCTTATAGTATTTTGTTGGGGTGCAATACATGTTACTTTATCCATGCTTCAATGGTTAGAACATTTTATTCTTA TTTTAGTTATAAACCTTGTTAGTCTTAAGCACTCATTCTCTTGCAATTCTGATAGGCATGTGGTGACTTAGTTTTGTGTA TACCAGTAGTCCACTATTTTGAAAGATCATTATGTAACTGAGTTTATTGTCTTGGCCTTGTTGGGTATTACTTTTGGTTA ATGCTGCTATTCAGATGAACTGATGGAGTCTTGCTCTATATAACAGGAAGATGATAGCAGTCTTGATGCATCAAAAGTTG CTGCAGGACATGTGGCTGCCAATACAATAAGACTTTTAATTGCTGGGTCTCAGGCTGGTGGATTGATTGGGATGTCTGGT CAAAACATTGAAAAGTTGCGGAACTCTTCTGGTGCCACCGTTACAGTTCTTGCACCAAATCAGTTGCCTTTATGTGCTTC TGCCCATGAATCTGATAGAGTAGTACAGGTGGGGTGTCTAAAGTGATGCTCATCAATTTTGACTACGAAAGATTTTAGCT ATGTCTGAGATATTGATATGCTCTTATCAGCAAACGTAGCTCATAAATATGATATATACGCAATGCAACATCCAAAGGAC AATCTAGCGGTTTAAAATATATCACTTTTATATGCACTTTCCTGATTTATTGATGAATTTGAGTTGTATGAAACAGCTTT TAAGAGTTGTACGGTAGGTATTCCCTGAGAGGCTTCACTGCAAACTTTTGTTTTTGAATAAATTTTTTTATGCAATCAAT TTTTCCTGAATGATATGAAACAGTTTGAGAGTTCTAGGTATTTGTTGAGAGGTTTCACCCAAAAATGTAGATTTGAGTAA TTTTTCTTTCTTTCTCTTTTAAGAAAAATGGATGTAGAATAGTTTTTGTTATCAAATATTCTTCCTTGTACTTCAATTTA CCAGATAAGATTTCAGATAAGAGTCCTCCACCATGTATCATGAAGATGTGGTCGGAATTTAAATTAGACATTTTCTGTAT GCTTTGATCTGCCGTCCTTACTTCTTACCATCATCTTATTTTTATGCTGCTGAATTTTGATTGAAGTTCTTCTTGAATTT AGTTATCAGGAGATGTTCCTGCAGTAATGAAGGCTCTGGATGAGATAGGTTGTCAGTTAAGGTCTGATTTTGGACTTCTG TATAGATTTTGAACCTGGTTCCAATTTACTTTTTAAATTTAGTTTGTCGTTTTCTCTAATCTATATGCTAACTCATAGGG AAAATCCTCCGAGGCAAGTGATTTCAATCAGCCCAACATACAATTATGCTGCAATTCGACCTTCCCAACCATATCTCGAC CCAACTTCAGGTTATTTAATGTTTTCTATATCAGAACAATTTGTAGCTGTAATTTAGCAGTTATATCAGGTTTTGAATAT TGTCTTACAACCACTTCATCTCTAGGACAACCAATCTTGCAGTTGATTATGTTACATTCGAGATGCTGATTTCGGAAACA ATGGTTGGTGGGTTGATCGGTAGGTGCGGCTCAAACATATCAAGGATCAGAAATGAGTCTGGAGCAATGATCAAGGTTAG TCTTCGCTTGAAGCACAGCCGTGGTTCAAATATGTGATCATTGATTATAAAGTCATTGTCCTACAGATTAATTTTTTTTT CACTGTTTGGATTCATATTCGATTGTCACTTTGCCGTTAAATGTTAAGTTTCTGCATAGAGAACATAGTCCTCGATTGTC ATTTTTAGCTGATTTATCTCTTCGTCAATTGTAAAATATTGCAGGTTTACGGTGGAAAAGGTGAACAAAAGCATAGGCAT ATTCAATTTGGTGGTAGTGCTCAACAGGTAATTTTGTTTATTTTTTTATTTTCTACCTCTTAGTGGGAGTTGCTGTCGTT ATTGATTTTGTAACCTGTTAATGTTTCCAAAAGAAGCAATATAGTTTTGATGTTTGAGACATCTTTTGTTTTCATTTTTG TGCCGTTGTGATAATTTTATTTGGCTACAGAAAACTAAATAGGTAGGAGAATAGGAAAAATATCTAGATAAGTTGAGATT CAAGCTTTGGGACACATGAAAAACAAATTTAGTAATAAGGTAGGCATTGTTGCATATAAGCATTAGACTAAAGAAGCCGT GGATGTCCAAATGGATTAGTTATAGGATCACAGCTCTGAAATTTATACCTTATAGTAGATTAAGGAATGTAAAATGTTAT CGGTGCATAAGTCCCACAAGTTGATTTTGAAGAGCAATACAAGTTGAGAATTCTGAGAGAATTCAGAAATTTAGGTCTAG AAATCTCTTAACGTGAAGATATCCGTAGGAGATCTAAATGGTCATGTGGAGAAGGTATCTAGAGGGTATATGGGTGTCCA TGCTCCTAATTTTTTTTTTCCCTGATAAGGAAATTGGATAGAAGACTTTGTATGAACTACGAAGTGGTACAAATAGAGTC TGGCCACCTAACAGGTATTGGTTATGAATCTGCATGTCAAGAGGAAAGTAAATAGGAGTAGGCAAGTTACATTCCTAGAA TTAATAGTGGAAATTAAAGGGTTAAAAGCAATGGCTGATCGAGGGAAACGTTTTGGAGGTTCAATGTTGAGCCCTTATCT TTTATCTTGGTCCTAGACATGCTTATTTAACACATCCAAGTGACAGTGCCATGATGCATGCTTTTTGCATATACTGTCTT TTTTGTCGGAGATATGAGAGAGGGAATACATGGAAAGGTAGGAATATGGAGGCAGGCCTTTATGGAATGTGAGTTTAGAG GCACAAAATCTAACATAGAGGTAAAACTTGGAGAACAATCAATATTAAAAGTAATAGACGATTAGACAGAGATATTCATC ATTGGATTCATGCAAGGTGGATAAAATGTATGAATGCTTAGGTGTGATTTGCGATAGAAAAGTACCTTCTAAGCTTAAAA GAAAATTTTATTGCACAGCTACAAAATATGTAATGTTGTATGGGGTACTCATGCAATCTTTGTTGAAACTTATTAACAGG TAGCTTTGGCAAAACAGAGAGTTGATGAGTATATATATTCTCAGTTGATACAACAAACTGGTACCCAACAATGATAGTAA GTATTTATGCTTAGAATTTGGTCAATTGAAGTTATATTTTTTTTTCATTTTAAATAAGTAAAAGATAAACATCCACGTCA TTGGAATGACTGATTCTTCACTTTCTGTAAAAGCCTTTATACCCCTTTTCACAGTTTAACATTTTATGCCTCCTTGATAG TGTAAAATTGTTGACCATGTTAGTGGATTAAAATTAAATCGTTATTTTAAATGATTTGCGACATATGCTTTAGTTTTAAG ATTAAATAAATTTGAAATGAATTTTTCATGCCTTCTTTTTTTTGGTCCCCTGCCAAAGTAAGTAGTAATAATTTCGTTAA ATATATGTGGTATGGTGAGATCTGAGTAATAATAACATAAGGAATCATGGTTGGATTAAATTAATCATAATTTTTTCAAC GAAATTAATGATTTAGATCCCGTGCATCGCACGGGTATAATCACTAGTAAACTTCTAAAGGAGATTACAGCTGGAGTTTA CTAATTGTCTTACTTAGACAATATTGAAAATGCATGAGTTGAGCCGTTGTGTTTTTTTTTTTCCTGAAGTTGAGCCATGC TCAATGCACATATAAACTTTCTTGGGTTCCCAACCCAGATTTATTTGAGTTTATATAAAGATTTTGTTCCATATACTCAT TCATTTTTTGAAGCTTTTAGTATTTTTGGTTTGAATATCGACCTTTCATATTTTTTTATTTGTATTTTTGTCTCTAGCAG ACTAATCTAACAATTGGAAGTGATAGGGGAACTAATTCTTCATAGAAACAAGGGACCAATTCTTCAATGCTTAAAACATA CTTGAGTGACATATAAGGGCTATTATTTTAACTCTAGGGGCTTAATATTCAATAGGACTACAACTCAAATAGGTGAATTT TCTGGACTAGAAGATCTTGTTGAAGCCAATTTATATGCTTTCCAGTAAGCACCTGTTCTGTTTTTTTCTTCTGCAATTAA TAGATTTCTGGTCTATTCAGTTTCTAGAGATGACAAACCTGGAAGCCAAAATCTCTTGTCCCTTCAATCTCTGCTATGAG TTCAGCTCTGGTTCTTCACCTGGGGTGCTTCTTTAAGTTAGTGAAATGTTGATTGTTTTATTAGGATGTTGGCTTTTAGA TGGATAGCGTTTGTTTTCCATATCATTTTAGTGACATTGAGTTACTCAGCTTGTACCGTATCTAATGTTTTAATATAGTT AAAGGTATAATGTTATATTCATATTTTTTTAATACAAATATGAATTCTTATGTATAATGTAACCTGTCTTGAGTTTTTTT TTTGGTTTCCCCGGTTAAAATGAGAGATTTGCTTGGCTATGACGAGTTTCAGCTTTCACATGCTGTTCATTAGGCTTAAT CTTAATTTATCTTGTTATTTCTCCTAAACGTTCAATTTTAGTCGATATGTCTTCCATGTCATATTTTTACAATGGGAATC AGTACATATAAACTGCAGCTCAGTCTATGTTATCTGTAAATTTGGGAGAGTTCTCCAATACTACGAACCGTTGTATGATA GGTTAGAAGAAATTTTAATCTTACAGGAAGAAGCACAAAGTGACTGAGCTCTGCAATCTATAGCTCTCACTCTCATAATT ACGTCTCAATCTAGAGATAAAACTAAGGTATACCTGACAAATTTATTGGCACCCTAGGTTTTGTCATCGTCTTCTCATTT CCTAGGTATAAACCTGACCTCATGTAGTCATTATAAACCTATTACCTAGTGTTACCGTTTTAGTCCACTAATTCCAATTG TATGGGTTCTACACCTGCAATAGTAGTAGAAGTTAAAAATTTCTACTTTCCCGTAAATATATAACTATATCTAAAGAGAC ACTTGGATGATATTTGGTTGAAGGGGAATGAAGGAAAATTGAGTGAAATGAAAGTCACCCTATCCCTCAACCTCATTCTT CAGCAAAAGAGCCACTTCTTTCCATTGCCTCCTTCCACTCACCATTTCCTTTATTGCTACCTCTTTTCTCCTCAACCTCT TTTTAAAAAGTCACATAATTTAATGTTTTAATCTAGTCCATTTATTATTAAATCTAACAGTCACAATT
CDS sequence (LotjaGi1g1v0488800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCAGCAAGGTCAAATTCCGATAAACCCCATGGTTCCTCAGCAGAATCCCATGGCACCCATTCCCATGCAGGTTCC TATGCACATGCAAATGCAGATGCAGATGCCCAACATGCCCATGCCAATGCATATGCCCATGCAGATGCCCCTCCACATGC CCCTCCAGGTTCCGTTCACCGGCTACGACCCAGCTGGGAACCTCATCTACGACCCATCGGGGAACCCCGGTTACGGGAAG CGCCGCCGCGAGGATGAAGCTCCGGGCACCGTTACTGAGGGGGATCAGTCTGCGGCCAAGCGCGTGAAGGGGCAGGACGT GATATTCAGGATCGTCGTGCCGTCGCGGCAGATCGGGAAGGTTATTGGGAAGGAAGGTTGCCGCATACAGAGGATTCGAG AGGAGACCAAAGCCACCATCAAGATAGCTGACGCTATTGCTAGACATGAAGAACGTGTGATCATTATTAGTTCAAAAGAC AATGATGAAAAGGTTACTGATGCAGAGAAAGCTCTTGAGCATATAGCCAATTTAATTTTAAAGGAAGATGATAGCAGTCT TGATGCATCAAAAGTTGCTGCAGGACATGTGGCTGCCAATACAATAAGACTTTTAATTGCTGGGTCTCAGGCTGGTGGAT TGATTGGGATGTCTGGTCAAAACATTGAAAAGTTGCGGAACTCTTCTGGTGCCACCGTTACAGTTCTTGCACCAAATCAG TTGCCTTTATGTGCTTCTGCCCATGAATCTGATAGAGTAGTACAGTTATCAGGAGATGTTCCTGCAGTAATGAAGGCTCT GGATGAGATAGGTTGTCAGTTAAGGGAAAATCCTCCGAGGCAAGTGATTTCAATCAGCCCAACATACAATTATGCTGCAA TTCGACCTTCCCAACCATATCTCGACCCAACTTCAGTTGATTATGTTACATTCGAGATGCTGATTTCGGAAACAATGGTT GGTGGGTTGATCGGTAGGTGCGGCTCAAACATATCAAGGATCAGAAATGAGTCTGGAGCAATGATCAAGGTTTACGGTGG AAAAGGTGAACAAAAGCATAGGCATATTCAATTTGGTGGTAGTGCTCAACAGGTAGCTTTGGCAAAACAGAGAGTTGATG AGTATATATATTCTCAGTTGATACAACAAACTGGTACCCAACAATGA
Protein sequence (LotjaGi1g1v0488800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQQGQIPINPMVPQQNPMAPIPMQVPMHMQMQMQMPNMPMPMHMPMQMPLHMPLQVPFTGYDPAGNLIYDPSGNPGYGK RRREDEAPGTVTEGDQSAAKRVKGQDVIFRIVVPSRQIGKVIGKEGCRIQRIREETKATIKIADAIARHEERVIIISSKD NDEKVTDAEKALEHIANLILKEDDSSLDASKVAAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKLRNSSGATVTVLAPNQ LPLCASAHESDRVVQLSGDVPAVMKALDEIGCQLRENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMV GGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 388 | 388 | 7.9E-177 | – | |
| PANTHER | 1 | 388 | 388 | 7.9E-177 | – | |
| MobiDBLite | 71 | 98 | 28 | - | – | |
| Gene3D | 102 | 178 | 77 | 9.6E-15 | ||
| SUPERFAMILY | 103 | 175 | 73 | 2.43E-14 | ||
| SMART | 105 | 180 | 76 | 2.2E-11 | ||
| ProSiteProfiles | 106 | 172 | 67 | 15.598 | – | |
| CDD | 109 | 159 | 51 | 5.07098E-13 | – | |
| Pfam | 109 | 173 | 65 | 6.9E-13 | ||
| SUPERFAMILY | 192 | 281 | 90 | 8.33E-12 | ||
| SMART | 198 | 275 | 78 | 2.6E-6 | ||
| ProSiteProfiles | 199 | 270 | 72 | 13.984 | – | |
| Gene3D | 199 | 280 | 82 | 2.1E-17 | ||
| Pfam | 201 | 270 | 70 | 4.2E-10 | ||
| CDD | 201 | 270 | 70 | 8.03741E-16 | – | |
| SUPERFAMILY | 301 | 379 | 79 | 6.72E-14 | ||
| Gene3D | 303 | 380 | 78 | 9.7E-15 | ||
| SMART | 307 | 377 | 71 | 2.9E-12 | ||
| ProSiteProfiles | 308 | 372 | 65 | 13.795 | – | |
| Pfam | 310 | 373 | 64 | 9.4E-12 | ||
| CDD | 310 | 372 | 63 | 6.79975E-12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi1g1v0488800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…