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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 70 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 6.561s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | KRR1 small subunit processome component; TAIR: AT5G08420.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|O74777|KRR1_SCHPO KRR1 small subunit processome component homolog; TrEMBL-Plants: tr|I1JIP3|I1JIP3_SOYBN KRR1 small subunit processome component; Found in the gene: LotjaGi1g1v0058400 | LjG1.1_chr1 | 8151283 | 8155580 | - | |||
n.a. | KH domain-containing protein family; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I3SNF0|I3SNF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0103800 | LjG1.1_chr1 | 16043361 | 16049051 | + | |||
n.a. | KH domain-containing protein family; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I3SNF0|I3SNF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0103800 | LjG1.1_chr1 | 16043674 | 16046759 | + | |||
n.a. | KH domain-containing protein family; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I3SNF0|I3SNF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0103800 | LjG1.1_chr1 | 16043674 | 16046759 | + | |||
n.a. | KH domain-containing protein family; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I3SNF0|I3SNF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0103800 | LjG1.1_chr1 | 16043674 | 16046759 | + | |||
n.a. | KH domain-containing protein; TAIR: AT5G53060.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8W4B1|RCF3_ARATH RNA-binding KH domain-containing protein RCF3; TrEMBL-Plants: tr|K7KUU1|K7KUU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0288000 | LjG1.1_chr1 | 69851773 | 69858396 | - | |||
n.a. | Far upstream element-binding protein; TAIR: AT2G25970.1 KH domain-containing protein; Swiss-Prot: sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2; TrEMBL-Plants: tr|A0A151TTJ8|A0A151TTJ8_CAJCA Far upstream element-binding protein 1; Found in the gene: LotjaGi1g1v0366300 | LjG1.1_chr1 | 84409233 | 84415724 | - | |||
n.a. | KH domain-containing protein family; TAIR: AT1G51580.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8W4B1|RCF3_ARATH RNA-binding KH domain-containing protein RCF3; TrEMBL-Plants: tr|V7AXD5|V7AXD5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0411200 | LjG1.1_chr1 | 90182409 | 90187993 | + | |||
n.a. | KH domain-containing family protein; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I1N3C0|I1N3C0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0459900 | LjG1.1_chr1 | 96345117 | 96351847 | - | |||
n.a. | KH domain-containing protein; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|A0A0B2S8I8|A0A0B2S8I8_GLYSO KH domain-containing protein; Found in the gene: LotjaGi1g1v0459900 | LjG1.1_chr1 | 96345898 | 96350415 | - | |||
n.a. | RNA-binding KH domain protein; TAIR: AT5G15270.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4; TrEMBL-Plants: tr|A0A0S3RSA7|A0A0S3RSA7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0488800 | LjG1.1_chr1 | 100175854 | 100185921 | + | |||
n.a. | RNA-binding KH domain protein; TAIR: AT5G15270.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SZH4|PEP_ARATH RNA-binding KH domain-containing protein PEPPER; TrEMBL-Plants: tr|A0A0R0IMX4|A0A0R0IMX4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0488800 | LjG1.1_chr1 | 100175854 | 100185921 | + | |||
n.a. | Protein RIK; TAIR: AT3G29390.1 RS2-interacting KH protein; Swiss-Prot: sp|Q9LIA4|RIK_ARATH Protein RIK; TrEMBL-Plants: tr|I1N4J7|I1N4J7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0512300 | LjG1.1_chr1 | 103400161 | 103414019 | + | |||
n.a. | Polyribonucleotide nucleotidyltransferase; TAIR: AT3G03710.1 polyribonucleotide nucleotidyltransferase; Swiss-Prot: sp|Q69LE7|PNP1_ORYSJ Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; TrEMBL-Plants: tr|G7L1J6|G7L1J6_MEDTR Polyribonucleotide nucleotidyltransferase; Found in the gene: LotjaGi1g1v0648200 | LjG1.1_chr1 | 120577214 | 120603712 | - | |||
n.a. | RNA-binding KH domain-containing protein; TAIR: AT3G04610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SR13|FLK_ARATH Flowering locus K homology domain; TrEMBL-Plants: tr|I1N9N6|I1N9N6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0712300 | LjG1.1_chr1 | 128018723 | 128024702 | - | |||
n.a. | Zinc finger CCCH domain-containing protein; TAIR: AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein; Swiss-Prot: sp|Q7F8R0|C3H14_ORYSJ Zinc finger CCCH domain-containing protein 14; TrEMBL-Plants: tr|I3T0H6|I3T0H6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0726000 | LjG1.1_chr1 | 129709502 | 129713099 | + | |||
n.a. | Exosome complex component RRP4; TAIR: AT1G03360.1 ribosomal RNA processing 4; Swiss-Prot: sp|Q9ZVT7|RRP4_ARATH Exosome complex component RRP4 homolog; TrEMBL-Plants: tr|B7FL19|B7FL19_MEDTR Ribosomal RNA processing protein; Found in the gene: LotjaGi1g1v0731200 | LjG1.1_chr1 | 130290398 | 130295677 | + | |||
n.a. | RNA-binding KH domain-containing protein; TAIR: AT3G04610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SR13|FLK_ARATH Flowering locus K homology domain; TrEMBL-Plants: tr|I1NCB1|I1NCB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0782800 | LjG1.1_chr1 | 135593478 | 135600755 | + | |||
n.a. | RNA-binding KH domain-containing protein; TAIR: AT3G04610.3 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SR13|FLK_ARATH Flowering locus K homology domain; TrEMBL-Plants: tr|I1NCB1|I1NCB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0782800 | LjG1.1_chr1 | 135593893 | 135599866 | + | |||
n.a. | Polyribonucleotide nucleotidyltransferase; TAIR: AT5G14580.1 polyribonucleotide nucleotidyltransferase; Swiss-Prot: sp|Q9S7G6|PNP2_ARATH Polyribonucleotide nucleotidyltransferase 2, mitochondrial; TrEMBL-Plants: tr|V7C0V9|V7C0V9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0243700 | LjG1.1_chr2 | 70704502 | 70715248 | - | |||
n.a. | Polyribonucleotide nucleotidyltransferase; TAIR: AT5G14580.1 polyribonucleotide nucleotidyltransferase; Swiss-Prot: sp|Q9S7G6|PNP2_ARATH Polyribonucleotide nucleotidyltransferase 2, mitochondrial; TrEMBL-Plants: tr|V7C0V9|V7C0V9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0243700 | LjG1.1_chr2 | 70704502 | 70715248 | - | |||
n.a. | KH domain-containing protein; TAIR: AT5G15270.3 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1N665|I1N665_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0260400 | LjG1.1_chr2 | 72835687 | 72846139 | + | |||
n.a. | KH domain-containing protein; TAIR: AT5G15270.3 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1N665|I1N665_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0260400 | LjG1.1_chr2 | 72835687 | 72846239 | + | |||
n.a. | KH domain-containing protein; TAIR: AT5G15270.3 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|A0A1J7IC78|A0A1J7IC78_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0260400 | LjG1.1_chr2 | 72836294 | 72838693 | + | |||
n.a. | Exosome complex component Rrp4; TAIR: AT2G25355.1 PNAS-3-like protein; Swiss-Prot: sp|Q7KWX9|EXOS3_DICDI Putative exosome complex component rrp40; TrEMBL-Plants: tr|I1JE93|I1JE93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0298600 | LjG1.1_chr2 | 77316205 | 77320980 | - | |||
n.a. | Exosome complex component Rrp4; TAIR: AT2G25355.1 PNAS-3-like protein; Swiss-Prot: sp|Q7KWX9|EXOS3_DICDI Putative exosome complex component rrp40; TrEMBL-Plants: tr|I1JE93|I1JE93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0298600 | LjG1.1_chr2 | 77317080 | 77320792 | - | |||
n.a. | RNA-binding KH domain protein; TAIR: AT2G22600.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8W4B1|RCF3_ARATH RNA-binding KH domain-containing protein RCF3; TrEMBL-Plants: tr|V7CJP6|V7CJP6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0328700 | LjG1.1_chr2 | 80410040 | 80415900 | + | |||
n.a. | Far upstream element-binding protein; TAIR: AT1G33680.1 KH domain-containing protein; Swiss-Prot: sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3; TrEMBL-Plants: tr|K7K5E5|K7K5E5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0446200 | LjG1.1_chr2 | 94106815 | 94117028 | + | |||
n.a. | Far upstream element-binding protein; TAIR: AT1G33680.1 KH domain-containing protein; Swiss-Prot: sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3; TrEMBL-Plants: tr|K7K5E5|K7K5E5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0446200 | LjG1.1_chr2 | 94106885 | 94115633 | + | |||
n.a. | Far upstream element-binding protein; TAIR: AT1G33680.1 KH domain-containing protein; Swiss-Prot: sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3; TrEMBL-Plants: tr|K7K5E4|K7K5E4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0446200 | LjG1.1_chr2 | 94106890 | 94115516 | + | |||
n.a. | RNA-binding KH domain protein; TAIR: AT1G33680.1 KH domain-containing protein; Swiss-Prot: sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3; TrEMBL-Plants: tr|K7K5E4|K7K5E4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0446200 | LjG1.1_chr2 | 94106894 | 94115600 | + | |||
n.a. | Polyribonucleotide nucleotidyltransferase; TAIR: AT2G25970.1 KH domain-containing protein; Swiss-Prot: sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3; TrEMBL-Plants: tr|A0A0B2RX31|A0A0B2RX31_GLYSO Far upstream element-binding protein 2; Found in the gene: LotjaGi2g1v0456300_LC | LjG1.1_chr2 | 94939286 | 94939915 | + | |||
n.a. | KH domain-containing family protein; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I1L6X1|I1L6X1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0052300 | LjG1.1_chr3 | 5489904 | 5496641 | - | |||
n.a. | KH domain-containing protein; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I1L6X1|I1L6X1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0052300 | LjG1.1_chr3 | 5490836 | 5494730 | - | |||
n.a. | KH domain-containing protein; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I1L6X1|I1L6X1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0052300 | LjG1.1_chr3 | 5490836 | 5494769 | - | |||
n.a. | KH domain-containing protein; TAIR: AT2G38610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610; TrEMBL-Plants: tr|I1L6X1|I1L6X1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0052300 | LjG1.1_chr3 | 5490836 | 5495033 | - | |||
n.a. | KH domain-containing protein; TAIR: AT3G08620.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620; TrEMBL-Plants: tr|I1L6X0|I1L6X0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0052300 | LjG1.1_chr3 | 5490836 | 5496357 | - | |||
n.a. | KH domain-containing protein; TAIR: AT5G56140.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140; TrEMBL-Plants: tr|G7J0G1|G7J0G1_MEDTR RNA-binding KH domain protein; Found in the gene: LotjaGi3g1v0332600 | LjG1.1_chr3 | 70176108 | 70185515 | - | |||
n.a. | KH domain-containing protein; TAIR: AT5G56140.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140; TrEMBL-Plants: tr|I1JVM0|I1JVM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0332600 | LjG1.1_chr3 | 70178215 | 70185363 | - | |||
n.a. | KH domain-containing protein family; TAIR: AT5G64390.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|F4KDN0|HEN4_ARATH KH domain-containing protein HEN4; TrEMBL-Plants: tr|V7B896|V7B896_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0345500 | LjG1.1_chr3 | 72315340 | 72324758 | - | |||
n.a. | RNA-binding protein 3; TAIR: AT5G51300.1 splicing factor-like protein; Swiss-Prot: sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein; TrEMBL-Plants: tr|I1L5P7|I1L5P7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0552600 | LjG1.1_chr3 | 97021888 | 97024198 | - | |||
n.a. | RNA-binding KH domain protein; TAIR: AT1G51580.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8W4B1|RCF3_ARATH RNA-binding KH domain-containing protein RCF3; TrEMBL-Plants: tr|I1KL57|I1KL57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0040000 | LjG1.1_chr4 | 4736638 | 4743376 | + | |||
n.a. | Poly(RC)-binding-like protein; TAIR: AT4G26000.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SZH4|PEP_ARATH RNA-binding KH domain-containing protein PEPPER; TrEMBL-Plants: tr|A0A151T5F8|A0A151T5F8_CAJCA Poly(RC)-binding protein 3; Found in the gene: LotjaGi4g1v0305900 | LjG1.1_chr4 | 68178157 | 68182616 | - | |||
n.a. | KH domain-containing protein; TAIR: AT5G46190.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1KRV4|I1KRV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0360700 | LjG1.1_chr4 | 73934559 | 73943518 | + | |||
n.a. | KH domain-containing protein; TAIR: AT5G46190.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1KRV4|I1KRV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0360700 | LjG1.1_chr4 | 73934562 | 73944082 | + | |||
n.a. | KH domain-containing protein; TAIR: AT5G46190.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1KRV4|I1KRV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0360700 | LjG1.1_chr4 | 73934897 | 73941157 | + | |||
n.a. | Exonuclease 3'-5' domain-containing protein 1; TAIR: AT2G25910.1 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; Swiss-Prot: sp|Q8CDF7|EXD1_MOUSE piRNA biogenesis protein EXD1; TrEMBL-Plants: tr|I1MXE7|I1MXE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0039700 | LjG1.1_chr5 | 6681290 | 6695561 | - | |||
n.a. | Far upstream element-binding protein; TAIR: AT2G25970.1 KH domain-containing protein; Swiss-Prot: sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1; TrEMBL-Plants: tr|I1M903|I1M903_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0040300 | LjG1.1_chr5 | 6818844 | 6824243 | - | |||
n.a. | RNA-binding KH domain-containing protein; TAIR: AT3G04610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SR13|FLK_ARATH Flowering locus K homology domain; TrEMBL-Plants: tr|A0A0L9TX81|A0A0L9TX81_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0177100 | LjG1.1_chr5 | 45118722 | 45124307 | + | |||
n.a. | RNA-binding KH domain protein; TAIR: AT5G04430.2 binding to TOMV RNA 1L (long form); Swiss-Prot: sp|Q9LZ82|BTR1_ARATH Protein BTR1; TrEMBL-Plants: tr|A0A151T0U1|A0A151T0U1_CAJCA RNA-binding protein Nova-1; Found in the gene: LotjaGi5g1v0253700 | LjG1.1_chr5 | 56257442 | 56266207 | + |