Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0506500 |
Transcript ID | LotjaGi1g1v0506500.5 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Non-specific serine/threonine protein kinase; TAIR: AT3G01090.2 SNF1 kinase homolog 10; Swiss-Prot: sp|Q38997|KIN10_ARATH SNF1-related protein kinase catalytic subunit alpha KIN10; TrEMBL-Plants: tr|Q53VM4|Q53VM4_LOTJA Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi1g1v0506500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:102464335..102469806) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATGGACCAGTTGGCCGAGGTGGTGGTGCAGGCCTGGACATATATCTACCAAATTATAAATTGGGGAAAACACTTGG CATTGGATCCTTTGGCAAGGTGAAAATTGCTGAGCATGTATTGACTGGTCACAAGGTTGCCATCAAGATCCTTAACCGTC GCAAGATAAAGAACATGGAAATGGAAGAGAAAGGTTTATCTTGTTCTTTAATCAATAGTCTTTAATCTTCATCTCATTGT GGCCTTTGATTTTTTTAGATTTTTCAAATTTTCTGGCAATTTTGTTTTGTGAATATTCATCATAGGTTCAAATTTCAAGA GTTATGTATTTCTAATACTCGTTATCCATATATTTTCTAATGCTTTGGAGTTCGAGGAGAAATATAACTGGTTTCCTTAT GCTTTACTACATGTTTGCTCCTGATAAGTCTTGTTAATTAGATATGCTTGCCTTGTTGGCCTCCTTTTCTTTTTTCAAAA TTTGTTGCAGTGAGAAGAGAAATCAAAATTTTGAGATTGTTCATGCACCCTCACATCATACGCCTGTATGAGGTCATAGA GACTCCAACTGACATATATGTTGTCATGGAATATGTGAAATCTGGAGAGCTCTTTGATTACATTGTAGAAAAGGGTAGGT TGCAAGAAGATGAGGCCCGTAATTTCTTTCAGCAGGTAGTGTTGTTTACTATTTGGTTTACTTGAGAAACTTCTGCTTGT AACAGAATAGTTAAGCTAATTTATGTTTTGGAAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTTC ATAGAGATCTGAAGCCTGAGAATTTGCTTTTGGACTCCAAATGTAATGTTAAGATTGCTGATTTTGGCTTAAGCAACATT ATGCGTGATGGACACTTCCTTAAGACAAGTTGTGGAAGCCCTAATTATGCAGCTCCTGAGGTTTGGAATTCGTTGATTTC TATCAGAGTGCATGATGATAGTGATATTAATTATCATCACATATTTTTTTTATTATTGAGGACACATATTTTCCATCTCT TCTAATTAACATTTCTTGGCTACACTTGTTTTATTTTTTATCTCACAGGTTATCTCTGGGAAATTGTATGCTGGACCAGA AGTTGATGTTTGGAGCTGTGGTGTAATTTTGTATGCTCTTCTTTGTGGCACTCTGCCATTTGATGATGAGAACATTCCAA ATCTCTTCAAGAAAATAAAGGTTTTTCATGTTAATTTATTTTTTTATTTCTTTTGCTTATTTTTTAACTAAACCTTTGGA CATTATTCTATACTAATATAGGAGTAATTCTTTAATCTTTTGACAACTTTGAATTAAACCATTGGATGCTGTTCTTTATT AGTATAATTGGAGTTTCTTTTGAAACCACATGTTCCAAATCGGATTTATTCTTTCAATGATGTTGTCATATTTACGCACA ATGTATTTTTTCATATAGGGAGGGATATACACTCTTCCTAGTCATCTATCTCCTGGTGCTAGAGATTTGATACCCAGAAT GCTCGTGGTTGATCCTATGAAGAGGATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCGTCTTCCGCGTT ATTTAGCTGTGCCACCTCCAGATACAATGCAACAGGCTAAAAAGGTTTGTTTTTACATATTTATTGGGCTATATCCTTCT TTTCTCCTCCAGTTTCACTCTTCTGCAGACTATATCCTCTTTGTTTTGTGAGAAAGCTTGCTCTACTTTTTATTCTTGTT GAAAATTATTAATTTTATTATGTGATAATGGGTGGTTACACAGACCTTCAGTAACATTGCAAGCCAAATGTCCTACCGGT TCTGTTATTTTTTCAGCTACTTTCTTCTCTTTTTTCAACGTTTTACACTTCAATCATACAGACACACATTGTGGATGATA AGGTGTATGTCAATCAGTGATGTGTAGCACCACTATAGAGGCGGAGTGGCGCGGAGCAGCAGCCGTCTGCGACGGAGTGT TCCAGCACCTAGTGTCATGGTTTTCACTTCAGGCACTCAATTGCTGCCGTGGCGCTATCCTAGTGCAATTCTATTCCTAT TTGAGTTGCGACATTCAGGCGACTTCAGACGCGACTCCATCTCCCTTATTCCTTGCTTAGTTCTGACATCCTTCTTCAGT TGCTATCATAGTAGTCAAACTTGGGATTATGACCTTAATTGGGAGGGGATTGTAAATCGTAAATCACATAACCATAAGAT TTTGCAGATTTCCTTTTTATATATAAATGTGAATATAAATTCTTATGTGCATAAACATAGATAATAAAAAAATACTTAAT ACTCTCTACATTTAGTGTGCAAGAGGATTTATAAAAAGTTTGTTTCATTCAATCATAAAATATCTAAATAATAGGATGAA ATTTATAGTTTGCTTCAGTTTATTCTGATTAATTCTATTATATTTCCGTTTTATTATCTTGTATAAATCCAAAGACATCA ATTTGCGTGGGGTCAGTGAGAGTGAGTGCGGAAGATTGCGTGGCCACCCCAACCTGTTCTCTTTTCCCTTTAAGATTGCG TGGCCACCAGAATCAGCACCATCCTTTCTTTCATATTATCTTCGATCCCATTGCTCTCTCTCTTTCTCTCTCACTCTGCC GAAGATGACGCCGCCTGCTGCAGCAGTTGAAGGCGGTGGGCCTGCACCGCAAGGGAGGCCACAAGGAGAAGGAGGAGGGT TTAGCCTCACTGGAATCACACTTATGGCGGTTTTCTGGACTTTGCTTCCAAATTCTTCTCTCCCGTACCCATGGCCTGTA CCGCAAGGGAGGCAGCAAGAAGGAGGGTTTGGTCTCACCGGAATCATACCCATGGTCATTTTCTGGACTTCACTTCCAAA TTCTTCCCTCCCAAACACGGATCTCCCTAAATCGCATACTCCCACTTAATCGAGATTTTGCTGCGATTTAGGGAGCTAGG TGACCATTAGTCTTTTTCTTTGTTTTATATTCTTCTTTTCTTAGTCTCTTTATGGTCTCTCCAGCACCTCTATTCTTATT TATCCCATTTCAACAGCCCTCCCCTGTTCTTTTTCTGTTCATTGTAAATCCCAGTCATGAACTGAGTATTTTTTTTTTAT CATTTTAGCATTTATATGTATATATTGTATGTAGTATAACTTATTTAAAATATGTGAAAAAGCAGACATCCTGCTATACT GCTATAGCGTTTTTGGGATTGGCTGCTACGCGCCATTTTTCTGGGGTTTATAATGCTATTGTTGATTGACATATAATAAT CGATCCAAAAAACTAAAATAGTGTCATGATTATGTAGATTGATGAGGAGGTCGTTCAGGAAGTCGTGAATATGGGATTTG ACAGGAATCAATTGATTGAATCTCTCCGCAACAGGATTCAGAATGAGGTTTGTGCTCTTTATTTTTACTTCATGTTTCTG CTTGATTTTTACTTACTACCATCCAAATATTTCAGGGTACTGTGGCATACTATTTGTTATTGGACAACCGATTCCGTGTT TCTAGTGGCTATCTGGGAGCTGAATTTCAAGAGACTATGGTGGGTCTCTTTCCCTTAGCTTCTTATGGTTAAATTAGTAG TCTGTTTCAAATGAAGTGATTTAGCTTATCCAGTTATTCAGAAGACATTTTTCTGATATTTGTGTAGAGTGTATCCTGTG CAAACTGGGTTGATTGTTATATACTTTTTGAGTGTTAGAGGCTTTGAGCTATGGGTAAATGTTTGGGTACTGTCTGATTA CATGGGTGCGAGCAGGAAGATGGTAGGGGCAGAAGAGAATTGGTTTCTCCTTCTGAAAGCTGCATGGGAAATGTGATAAA AAAGCAGGGTGAACTTTTTAACAACCTGCTAATAAGGTGGGTGAGTGGTCGGGAGTAGGGCGGATTCTGTTAGATTAAAA GAGCAGAGGGGAAAGGAAAATTTGAGAGAGGAAACTATCCCCTCAGAGCTAGCTAGATTCTGAGTTACATTGTACTATTT TCTGTAATTTGAGGAGGTTCCTATCAGTAAACCAAGTCATTAAATTTATCTTTCTAACCTGAAAATGGTTCTTTGTGGAT CTTATAACCATGGAATTGCAGCTTTCTTATTCTTGGTTGATATTTTACTTTGCATGTTTTTTTTTAAACAATTCCCTAAG CAAAACTCATTAGTTTTAGTTTTATAATGTGACTGCTCAGGATTCTGGTTTTAACCTACTTTGCATGTTTTTTTTTAAAC AATTCCCTAAGCAAAACTCATTAGTTTTAGTTTTATAATGTGACTGCTCAGGATTCTGGTTTTAACCAAATGCATCCTGG TGAGGTTGCTTCTTCGGTTGTCGGCCACCGCATTCCAGGCTACATTGACTATCCAGGTGTAGGAATGAGACCACAGTTCC CTGTTGAAAGAAAATGGGCTCTTGGCCTTCAGGTAAAGTGACCAACACAATTGATGATATAGCTGTTTGAGAGGGCATAA TTGTTGGATTCTTTAATTCATCTAACTTGTTCCATCTCTTCCGTGGAAGAATGGTCTGTTAAATTTTATTGCTTATGTAT GTACTTCCTTAACTCCCTTGATATGCACATATAGGATATTGCTGTGTCTAGACGCAACTTCTCCAAAAGCATAAGTTGTT AGGTGTAGATACATGAATGATTTTGCATCTAATATTTTTCAGGATGTGCACATGCATGAATGATTTTAAATATAGTTTTT TTGTCTTGTTAGTTAATTTCCTGTATGAAAACTTGTGGCAGTCTCGAGCTCATCCTCGTGAAATAATGACTGAGGTCCTT AAAGCTTTGCAAGAATTGAATGTATGCTGGAAGAAGATTGGACACTACAACATGAAGTGCAGGTGGGTTGCTGGCATTCC TGGTCATCATGAAGGAATGGTTAACAACAATACTGCCCATAGCAATCATTACTTTGGAGATGATTCCAGCATTATTGAGA ATGATGCTGTTCCTAGTTCGAATGTGGTCAAATTCGAAGTGCAGGTAATTTAGCTTAAGAACCGTAATCTATAATCCATT TGATATAAAAAATCTTCAATTCAAGTTAGTAACTTTTTTTTTGTGATTGTCAGATAAAGTATTCCTTTGCTAAATTTAAG TGGGTTATAGCTGTAGAATGGCCAAAATAAAGCTACAGTGCATATCTAAAAAACCTTCAGATTATTTTCCTTCCCTGACC ATGTTTTTAGTTCTGTACATTTTCAAATATGGATAATTCTTGATAGTGTTATATGCATTTGAAAACGGTTTTCTTAATAA ACTGTTTCTTGTCATGTTGTGTAGTCTATAACCCCTTTCCAGAATATTCTCTAATTCTTATGTTAACATCCTTAACAGCT TTACAAAACTCGGGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTGCAGGGCGCTCAGTTTCTTTTCCTGGACCTGTGTG CTGCTTTCCTTGCGCAGCTTCGTGTACTCTAG
CDS sequence (LotjaGi1g1v0506500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGGACCAGTTGGCCGAGGTGGTGGTGCAGGCCTGGACATATATCTACCAAATTATAAATTGGGGAAAACACTTGG CATTGGATCCTTTGGCAAGGTGAAAATTGCTGAGCATGTATTGACTGGTCACAAGGTTGCCATCAAGATCCTTAACCGTC GCAAGATAAAGAACATGGAAATGGAAGAGAAAGTGAGAAGAGAAATCAAAATTTTGAGATTGTTCATGCACCCTCACATC ATACGCCTGTATGAGGTCATAGAGACTCCAACTGACATATATGTTGTCATGGAATATGTGAAATCTGGAGAGCTCTTTGA TTACATTGTAGAAAAGGGTAGGTTGCAAGAAGATGAGGCCCGTAATTTCTTTCAGCAGATAATCTCTGGTGTGGAGTACT GTCACAGGAATATGGTGGTTCATAGAGATCTGAAGCCTGAGAATTTGCTTTTGGACTCCAAATGTAATGTTAAGATTGCT GATTTTGGCTTAAGCAACATTATGCGTGATGGACACTTCCTTAAGACAAGTTGTGGAAGCCCTAATTATGCAGCTCCTGA GGTTATCTCTGGGAAATTGTATGCTGGACCAGAAGTTGATGTTTGGAGCTGTGGTGTAATTTTGTATGCTCTTCTTTGTG GCACTCTGCCATTTGATGATGAGAACATTCCAAATCTCTTCAAGAAAATAAAGGGAGGGATATACACTCTTCCTAGTCAT CTATCTCCTGGTGCTAGAGATTTGATACCCAGAATGCTCGTGGTTGATCCTATGAAGAGGATGACCATACCTGAGATCCG TCAACACCCATGGTTCCAAGCTCGTCTTCCGCGTTATTTAGCTGTGCCACCTCCAGATACAATGCAACAGGCTAAAAAGA TTGATGAGGAGGTCGTTCAGGAAGTCGTGAATATGGGATTTGACAGGAATCAATTGATTGAATCTCTCCGCAACAGGATT CAGAATGAGGGTACTGTGGCATACTATTTGTTATTGGACAACCGATTCCGTGTTTCTAGTGGCTATCTGGGAGCTGAATT TCAAGAGACTATGGATTCTGGTTTTAACCAAATGCATCCTGGTGAGGTTGCTTCTTCGGTTGTCGGCCACCGCATTCCAG GCTACATTGACTATCCAGGTGTAGGAATGAGACCACAGTTCCCTGTTGAAAGAAAATGGGCTCTTGGCCTTCAGTCTCGA GCTCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTTTGCAAGAATTGAATGTATGCTGGAAGAAGATTGGACACTA CAACATGAAGTGCAGGTGGGTTGCTGGCATTCCTGGTCATCATGATTCCAGCATTATTGAGAATGATGCTGTTCCTAGTT CGAATGTGGTCAAATTCGAAGTGCAGCTTTACAAAACTCGGGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTGCAGGGC GCTCAGTTTCTTTTCCTGGACCTGTGTGCTGCTTTCCTTGCGCAGCTTCGTGTACTCTAG
Protein sequence (LotjaGi1g1v0506500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGPVGRGGGAGLDIYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHI IRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIA DFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSH LSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEEVVQEVVNMGFDRNQLIESLRNRI QNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNQMHPGEVASSVVGHRIPGYIDYPGVGMRPQFPVERKWALGLQSR AHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGIPGHHDSSIIENDAVPSSNVVKFEVQLYKTREEKYLLDLQRVQG AQFLFLDLCAAFLAQLRVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 9 | 480 | 472 | 8.2E-253 | – | |
PANTHER | 9 | 480 | 472 | 8.2E-253 | – | |
Gene3D | 13 | 350 | 338 | 1.7E-113 | – | |
CDD | 17 | 272 | 256 | 0.0 | – | |
SUPERFAMILY | 17 | 289 | 273 | 1.48E-99 | ||
Pfam | 20 | 272 | 253 | 1.5E-80 | ||
SMART | 20 | 272 | 253 | 5.6E-113 | ||
ProSiteProfiles | 20 | 272 | 253 | 55.057 | ||
ProSitePatterns | 26 | 49 | 24 | - | ||
ProSitePatterns | 139 | 151 | 13 | - | ||
SUPERFAMILY | 282 | 331 | 50 | 1.05E-5 | ||
ProSiteProfiles | 293 | 333 | 41 | 14.716 | ||
Pfam | 294 | 330 | 37 | 8.6E-9 | ||
CDD | 294 | 334 | 41 | 7.10548E-20 | – | |
SMART | 295 | 332 | 38 | 7.8E-7 | ||
SUPERFAMILY | 329 | 498 | 170 | 6.8E-44 | ||
CDD | 390 | 496 | 107 | 2.4114E-41 | – | |
Gene3D | 396 | 499 | 104 | 5.4E-30 | – | |
ProSiteProfiles | 450 | 498 | 49 | 16.03 | ||
Pfam | 456 | 497 | 42 | 7.5E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0506500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…