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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0646300 |
| Transcript ID | LotjaGi1g1v0646300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9ULJ7|ANR50_HUMAN Ankyrin repeat domain-containing protein 50; TrEMBL-Plants: tr|A0A1J7G1T5|A0A1J7G1T5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0646300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120349995..120352484) extracted from Lotus japonicus Gifu genome v1.2.
TGCCCTTTACACTGAAAGTGATGTGTACAAGAGACATTGATCTATTATGATCCATTTAATATACACAAGTGTTTCATGCA TAACAACTTGTGATTGGTTCAGATAGTATATGCTTGATTCCTCAGCAAAGTCTTAGATTCGAGTCTCATAGGTAGATAAA ACATCTGTTGGAACTTAAAAGAGTTCATCCCACGAAGATGTAAATGTTTCCGATTCAAACACGATTCTTCCTAGGAGATA CCTTACACCAAAAACAAAGATTGTTTATGCAGAGTTCAGACAGGCAATAGAACAAGTCACAGTTGTTTTATACATCCCCA CTTGGCATGTTCTCTGAGTAGTAAAGCCGGCACCTATTTCATTTCTTTCATAGAAAAACAACAGCCACCAAATCACCAAA CAGTTCAGTTTTTCTTCAGTTTGAAAGCATCTGTTCTTGCTTTTCCTTCCAAAATTGATTCAGAATCTGAGTGAGTAACT TCATCATCAAACAAACACCTTAAAGACCAAACCTATAGTAGTAGTAGCAGAAAACCACAAACAAACATGGACAGGCTCAT AAGCTTAGACCCATCAAACCTAGTCCCAATAAGAATCGAACCAGGTGAAAAATGTCACGGCCAAATCACCTTACGCAATG TCATGTACACCATGCCGGTGGCGTTCCGCCTCCAACCACTCATCAAGACCCGTTACACCGTCAAGCCACACTCCGGTATC ATCTCCCCTCTTGCCACCCTCACCGTGGAAATCACCTACCACCTCCCACCAGGCTCCATCCTCCCTCACTCGTTCCCCCA CTCCGACGACTCCTTCCTCCTCCACAGCGTGGTCGTCCCCGGCGCCGCCACCAAGGAACCTTCCTCCATGTTTGAAGCCG TCCCCAACGACTGGTTCACCGCCAGAAAGAAGCAAGTCTTCATCGACAGCGGCATCAAGGTCATCTTCTTAGGCTCACCA ATCTTAACCCACCTCATTGAACACGGTTCCATGGATGAAATCAGAGAGGTTCTTGAATGCAGCGACCCATCTTGGAAATC TGTTGATTCCACTGACCCACAAGGCAACACGCTTCTCCATTTGGCTATCTCACAGAAGAGACCAGATCTTGTTCAACTGC TCCTTGAATTCAAGCCAAACATTGAATCAGTCAACACAAACTGTGCTCGTTCTGGTTCTGGTGACTCTGTTTCAACAACA ACACCATTGGAGTTGGCGTGTTCATTGGGTGAAGCTTTGATTGTTGAGCTTCTGTTAGCAAACAAGGCGAACACAGAGCG AGCTGAATCGTCGACATGGGGTCCGGTTCATCTTGCGGCGAGGGAAGGAAACGTGGAGGTTCTGCGGCTTCTGCTGCTGA AAGGGGCAGATGTTGATTCAAGGGCTAAGGACGGGAACACGGCGTTGCACCTCGCCGTGGAGGAGCGTCGGAGGGACTGC GTGAAGCTTCTGCTGGCGAACGGGGCGAGGACGGACATCCGTAACGGGAGAGACGGCGACACGGCGCTGCACGTGGCGGC GGTCACCGGGGAAGAGAGCGTGATCAGGACGCTGTTGCAGAAAGGCGCGAACAAGGATGTGAAGAATGGGCAGGGGAAGA CGGCGTATGATGTGGCGGCGGAGAACGGGCAGAAGCGCGTCTTCGACGCGCTTCGCCTGGGAGACGGGCTGTGCGTGGCG GCGAGGAAGGGGGAGGTGGGGGAGGTCGTGAGACTGCTGGAGGGTGGCGCCGTGGTGAACGGGAGGGACCAAAACGGGTG GACGGCGCTGCACAGGGCGTGTTTCAAGGGGAGGGTGGAGGCGGTTCGTGTTCTGTTGGAAAAGGGTGCAGAGGTTGACG CGGCGGATAGAGACGGTTACACGGCGCTGCATTGCGCGGCGGAGGCGGGGCATGCTGACGTGGCGGAGGTGTTGGTGAAG AAGGGTGTGGATGTTGAGGCTAGAACCAATAAGGGTGTGACGGCGTTGCAGATAGCAGAGACTTTGCACTATGTTGGGAT AACGAGGATACTGTTGAATAGTGGGGCTAGTAGTGATGGTTTGGATCAAATGGCTCAATCTGAGAAGATGAAGATGGTGA AGAAGAAGAGAGTAGGAAGAAGAAACTCAGAGGTTGAACATTCAATGGCTTTAGCTGTTTTATAGTTGGTAATTTGCATC ACATTTACATGATCTGTATTCAAATTTAGGTGATTGTTTGTTGGGTATAAATTGTGCAGAAAATTTGTAGATTGATCAAA CTTGTTCTGATTTCCAGTGCTTATAAGTAATTATTTTCAAATTTATGAATAATGTTTCATGAGATGATACTTCTGTAAGT TTTTTTTTTTGATAAGCTAAAATTGCACTCAACTAGCAATGCTAACCCGAATACAGAGGAGGGGAACTAGTCAAAGAAAG ACTAGAATCCACAAGATTACAAAAAGTAAATTACAAAATACAAATTAAAAGGAGCCATGCTTCCACTTCTGTAAGTGAAT GAGTTTGTCC
CDS sequence (LotjaGi1g1v0646300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAGGCTCATAAGCTTAGACCCATCAAACCTAGTCCCAATAAGAATCGAACCAGGTGAAAAATGTCACGGCCAAAT CACCTTACGCAATGTCATGTACACCATGCCGGTGGCGTTCCGCCTCCAACCACTCATCAAGACCCGTTACACCGTCAAGC CACACTCCGGTATCATCTCCCCTCTTGCCACCCTCACCGTGGAAATCACCTACCACCTCCCACCAGGCTCCATCCTCCCT CACTCGTTCCCCCACTCCGACGACTCCTTCCTCCTCCACAGCGTGGTCGTCCCCGGCGCCGCCACCAAGGAACCTTCCTC CATGTTTGAAGCCGTCCCCAACGACTGGTTCACCGCCAGAAAGAAGCAAGTCTTCATCGACAGCGGCATCAAGGTCATCT TCTTAGGCTCACCAATCTTAACCCACCTCATTGAACACGGTTCCATGGATGAAATCAGAGAGGTTCTTGAATGCAGCGAC CCATCTTGGAAATCTGTTGATTCCACTGACCCACAAGGCAACACGCTTCTCCATTTGGCTATCTCACAGAAGAGACCAGA TCTTGTTCAACTGCTCCTTGAATTCAAGCCAAACATTGAATCAGTCAACACAAACTGTGCTCGTTCTGGTTCTGGTGACT CTGTTTCAACAACAACACCATTGGAGTTGGCGTGTTCATTGGGTGAAGCTTTGATTGTTGAGCTTCTGTTAGCAAACAAG GCGAACACAGAGCGAGCTGAATCGTCGACATGGGGTCCGGTTCATCTTGCGGCGAGGGAAGGAAACGTGGAGGTTCTGCG GCTTCTGCTGCTGAAAGGGGCAGATGTTGATTCAAGGGCTAAGGACGGGAACACGGCGTTGCACCTCGCCGTGGAGGAGC GTCGGAGGGACTGCGTGAAGCTTCTGCTGGCGAACGGGGCGAGGACGGACATCCGTAACGGGAGAGACGGCGACACGGCG CTGCACGTGGCGGCGGTCACCGGGGAAGAGAGCGTGATCAGGACGCTGTTGCAGAAAGGCGCGAACAAGGATGTGAAGAA TGGGCAGGGGAAGACGGCGTATGATGTGGCGGCGGAGAACGGGCAGAAGCGCGTCTTCGACGCGCTTCGCCTGGGAGACG GGCTGTGCGTGGCGGCGAGGAAGGGGGAGGTGGGGGAGGTCGTGAGACTGCTGGAGGGTGGCGCCGTGGTGAACGGGAGG GACCAAAACGGGTGGACGGCGCTGCACAGGGCGTGTTTCAAGGGGAGGGTGGAGGCGGTTCGTGTTCTGTTGGAAAAGGG TGCAGAGGTTGACGCGGCGGATAGAGACGGTTACACGGCGCTGCATTGCGCGGCGGAGGCGGGGCATGCTGACGTGGCGG AGGTGTTGGTGAAGAAGGGTGTGGATGTTGAGGCTAGAACCAATAAGGGTGTGACGGCGTTGCAGATAGCAGAGACTTTG CACTATGTTGGGATAACGAGGATACTGTTGAATAGTGGGGCTAGTAGTGATGGTTTGGATCAAATGGCTCAATCTGAGAA GATGAAGATGGTGAAGAAGAAGAGAGTAGGAAGAAGAAACTCAGAGGTTGAACATTCAATGGCTTTAGCTGTTTTATAG
Protein sequence (LotjaGi1g1v0646300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRLISLDPSNLVPIRIEPGEKCHGQITLRNVMYTMPVAFRLQPLIKTRYTVKPHSGIISPLATLTVEITYHLPPGSILP HSFPHSDDSFLLHSVVVPGAATKEPSSMFEAVPNDWFTARKKQVFIDSGIKVIFLGSPILTHLIEHGSMDEIREVLECSD PSWKSVDSTDPQGNTLLHLAISQKRPDLVQLLLEFKPNIESVNTNCARSGSGDSVSTTTPLELACSLGEALIVELLLANK ANTERAESSTWGPVHLAAREGNVEVLRLLLLKGADVDSRAKDGNTALHLAVEERRRDCVKLLLANGARTDIRNGRDGDTA LHVAAVTGEESVIRTLLQKGANKDVKNGQGKTAYDVAAENGQKRVFDALRLGDGLCVAARKGEVGEVVRLLEGGAVVNGR DQNGWTALHRACFKGRVEAVRVLLEKGAEVDAADRDGYTALHCAAEAGHADVAEVLVKKGVDVEARTNKGVTALQIAETL HYVGITRILLNSGASSDGLDQMAQSEKMKMVKKKRVGRRNSEVEHSMALAVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 512 | 512 | 4.2E-213 | – | |
| Gene3D | 1 | 137 | 137 | 1.4E-10 | ||
| PANTHER | 1 | 512 | 512 | 4.2E-213 | – | |
| SUPERFAMILY | 2 | 150 | 149 | 1.67E-16 | ||
| ProSiteProfiles | 4 | 135 | 132 | 14.581 | ||
| Pfam | 5 | 110 | 106 | 9.7E-7 | ||
| Gene3D | 138 | 286 | 149 | 1.3E-29 | ||
| SUPERFAMILY | 165 | 501 | 337 | 7.24E-70 | ||
| SMART | 172 | 201 | 30 | 6.5E-4 | ||
| ProSiteProfiles | 172 | 204 | 33 | 10.499 | ||
| ProSiteProfiles | 172 | 501 | 330 | 82.583 | ||
| Pfam | 173 | 199 | 27 | 6.7E-4 | ||
| ProSiteProfiles | 216 | 248 | 33 | 8.523 | ||
| SMART | 216 | 245 | 30 | 220.0 | ||
| SMART | 249 | 278 | 30 | 0.0084 | ||
| ProSiteProfiles | 249 | 281 | 33 | 12.369 | ||
| Pfam | 255 | 347 | 93 | 1.2E-19 | ||
| ProSiteProfiles | 282 | 314 | 33 | 13.063 | ||
| SMART | 282 | 311 | 30 | 2.6E-5 | ||
| Gene3D | 287 | 315 | 29 | 8.1E-8 | – | |
| ProSiteProfiles | 316 | 348 | 33 | 14.132 | ||
| SMART | 316 | 345 | 30 | 2.8E-5 | ||
| Gene3D | 316 | 369 | 54 | 7.4E-14 | – | |
| PRINTS | 317 | 332 | 16 | 6.1E-6 | ||
| SMART | 349 | 378 | 30 | 2000.0 | ||
| Gene3D | 370 | 514 | 145 | 4.7E-39 | ||
| Pfam | 375 | 466 | 92 | 1.1E-17 | ||
| ProSiteProfiles | 403 | 435 | 33 | 14.506 | ||
| SMART | 403 | 432 | 30 | 1.5E-5 | ||
| PRINTS | 419 | 433 | 15 | 6.1E-6 | ||
| ProSiteProfiles | 436 | 468 | 33 | 13.945 | ||
| SMART | 436 | 465 | 30 | 1.1E-6 | ||
| ProSiteProfiles | 469 | 501 | 33 | 8.79 | ||
| SMART | 469 | 498 | 30 | 1600.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0646300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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