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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0700400 |
| Transcript ID | LotjaGi1g1v0700400.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 26S protease regulatory subunit; TAIR: AT2G20140.1 AAA-type ATPase family protein; Swiss-Prot: sp|Q9SL67|PRS4B_ARATH 26S proteasome regulatory subunit 4 homolog B; TrEMBL-Plants: tr|A0A0R4J302|A0A0R4J302_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0700400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126846565..126850734) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTCAAGGAACTCCGGGCGGTTTGAACCGGCAAGGTCTACCGGGTGACCGAAAACCCGACGGCGGCGACAAGAAGGA GAAGAAGTTCGAGCCGGCGGCGCCTCCAGCACGCGTTGGCCGCAAGCAGCGGAAGCAGAAGGGCCCTGAGGCGGCAGCGC GGTTGCCGACGGTGACGCCGTTGTCGAAGTGCAAGCTGAGGCTGTTGAAGCTGGAGCGAATCAAGGACTATCTCTTGATG GAGGAGGAGTTCGTGGCCAACCAGGAACGACTCAAGCCTCAGGAGGAGAAGGCTGAAGAGGACAGATCCAAGGTCGATGA CCTTAGGGGTTCGCCGATGAGTGTTGGGAATCTTGAAGAGCTCATTGATGAGAATCATGCTATTGTTTCCTCTTCGGTTG GGCCTGAGTACTATGTTGGCATCTTGTCGTTTGTTGATAAGGATCAATTGGAGCCTGGATGCGCGATTTTGATGCATAAC AAGGTAGGGTTTCGAGTCTTGAATTGTTTTTAGGTTTTTGATTGAGTAGTGAGTGTTTGTTATGGATTTTTGGTTTAGGG TTTTGTAATTAAGCTGTGTATTTTCTGATTAGGGGGAAGTGATTATGAATTGAAGAGTGAGGGTTTGTGTTTTTAGGCTG AATTGGTGGAGTTTAAAGTGATTTTGCTGTTAGTGTTATCAAGTGAACTTGTTTTGATATGTAATAGCTGGTTTGATGGT TGAGTGGGTGGAAATTTTGGTTAATGCATCTCTTAATTGACATTATATTAAACCCTGAAATTGACATCAGTTATCGGTCT GTTATATCAGGGAGATGTTTATTAGTTGACACATACACAATTCCACATTACAAGATGGTGAAATGAAAATATCAATATGG CAAGCTTTTATAACACTAAGCTTTACATGATTCATACCTCATTGGGTTTTCAACCTTTTGGGGATTTGGTGTTAATTGCG TGAGAGAGGTTGTGTATGTATTTACTCTTTAGGGATATGGATCCCTTGAAAATTCTCCCATGTTCGCTCATGTCTAAATT CACATGTATGCATCAAATAGGGTTAGGTGGGACCCTTCAAATGATCATGAAGAGAGTTAGGCACAAAATTTCAACATGAG AGAATTTTCACACGAGAGGGTCCTAATCCATGTATTTAGATAAGGGTTTTTCTCTTTTTGATGACAACATGTTAGGAGAG ATTTATGTTGTCCCTGTTGTTGTTTGGTGTATTCTGCGAATCTTGTTATGGAAAGTTGCATGATAATCTACAGAAAATAT AAACTAGGAGCTGTTCCTGTCTTGTTGAAGAAATGATGAATTAAACTTGAGAGGCATGATAATATATTGTAACTGATTTA TGAACACCAAAACCTGGAAAGATGGTGGAGGGAAAGTTGTTAGTAAAATATATTTTTGAACCATGTTTCTTTGGGGTGAA ATGTTGGTTAACATAATTGTTGTCTGTGCTTCTGAATTGCCATCCCTTCTTGTACTGTTGATATGGATATATACGGAAGT TTTAATATTTCTTATCGTGTATGATTCTTTACCAGGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATG GTCTCTGTCATGAAGGTTGAGAAGGCTCCTTTGGAATCTTATGCTGACATTGGTGGTTTGGATGCCCAGATTCAGGAAAT TAAAGAAGCAGTTGAGCTTCCTTTGACACATCCTGAACTGTATGAAGACATTGGTATAAAACCTCCTAAGGGGGTCATTT TATATGGAGAACCTGGAACTGGGAAGACATTGCTTGCAAAGGTGTGCAGTTTATGTGTTTCTTACAGGGCCTTTGGTATA AAATTTCAACAATTCCTGTTTGTGTTTCTCATTTCTTTGTACGCTATCTCTAAGTTACCAATAAGCATTCTTCACAATAA ATGAATAACATGGGGTCTGAAATTATTTGCTCATAGACCAACTAAGCTTAAGTTGTTGGGAGAAGGCACATTAGTGGTTT TATTTTATATTTTTAACTGCCCCTCATGGAAGAGTTCACTGGGCCTCAAGAATGGACAATGCATATGTCCACCTACCTTG TGCTGAAATTCAACTTTTTTTTTAGAATAATGGATGGCAGCAAGGATCGAATTCCAGACTACTTAATATTATATTGATGT TGTAGAAGCATTTGAAAATCTCATCAAATTATTTATTCCTAACTGATGCTAGTCAACATTAATTAACTGTAAATCTGAGT CAAAAAGCAATAGTTTGCATTTAGAAAAAAAAAACAATTAAACAAACGAAGGGTTATTTTTTTGGTGTCATATTATCAGA ACTTGTACATGATCGTTACTAGGAATGTAGTTCGACCTGTGTCTAGTTATGGTACACATTTATTGGCCCATGTCTAACTG TGTTGTTTTTATTATTGCATGTGATGCACTACTTTCTGCACAATCGATTTGGTCTAAGTCAAACCTTGTTTGCTTTCAGG CTGTGGCAAACTCAACATCAGCAACGTTCTTACGTGTTGTTGGTAGTGAATTGATACAAAAATACTTGGGAGATGGTCCA AAACTTGTGAGGGAACTTTTCCGAGTTGCTGATGATCTTTCCCCTTCTATTGTCTTCATCGATGAAATTGATGCTGTTGG TACAAAGAGGTAGGTTATTAAACATCAGCATATTGACTTATCACCGGGTGCCATAGACTTTTCTGTCCTGTTTTCTTGAA GGTTATATTTTTGTTTTGGGGAGATGGTATGTGACTGGTGAAGGAGTGATATCTTGGAACACTTTGTAGTATAACTCTCT TGGATGCCGTGCAGGTATGATGCTCATTCAGGTGGAGAACGAGAAATTCAAAGGACTATGTTGGAGTTGTTGAACCAGTT AGATGGTTTTGATTCAAGGGGAGATGTAAAAGTTATCCTTGCCACCAACAGAATTGAAAGCCTTGATCCAGCTCTGCTAC GTCCTGGTCGAATAGACAGGAAGATTGAGTTTCCTCTCCCTGATATCAAGACAAGGAGACGCATTTTCCAGGTAAGCATG TTTTGTGAAAACAACACCACGGATGCTACTTTTGCTGATTCGCTGCTTGATGGTATGACTAATGTTTTAATTCTTAAATT CAGATACACACATCAAGGATGACATTGGCTGATGATGTCAACTTAGAAGAATTTGTTATGACTAAAGATGAGTTCTCTGG AGCTGATATAAAGGCAATATGTACTGAAGCTGGTTTACTTGCTTTACGAGAACGCCGAATGAAGGTTAGAATTAGATTCT ATATCTTATGTGCAATTATGACCAAACCAATGCCATCCCGTGAAAATAATTGTGGTACTCTGTTGGTGTTTTGAATTTTG AAATTAGTAATGCTAGCAAGCTTATTTTATGGTCCAAATCATATATTAAGCTAAGATAACAAAATGTAGCATAGATTGGT TGATGTTTGAATTTGAACTCTCAATTTTAGAGAAACCAACTTTTTCAGAACCCTAGAAGAACGTGGCAGGAAAAAAATTG AACAAGGGTTGAAATATTAGGAAGATTGAGGAAATGGAACTAAGATAAGATTTCACTTTAGATGCATCTCTTGGAATTTA GAGAGAGGAAAAGATAGAGAAGAATTTACCCCTTGGTCTCTAGTTTTTAATTTTTATGCACACACACAGAGATTAGTGAA CAATCAAAATCTTCTCTCTTTATGTGGTATTGGCTACAAATATATGCTGTGTGTGTGTGTTAACAAGAGTTGTGGAATGT AATGCCATTCAAATACACCTTATATTTTAAAAAAGAAAAAAACAAAGTAAAAAAAGATATAATCCCCATCAGTGACAGAC TGACAATAAATATGCAAAAAGTGATCTCTTGGCTATTTCAATTTTCCCTTCCACCATGAAGAATAGAGCTCCTACTGTTT CCCTTGCATTCATAATTTTTGTTCGTGATCTTATTTTGCATTTCATTGGTAACTTGAACATTCGTTAAGGTCTTATTTGT GCAATTCTCTATTTTCTAGGTTAAGGTCTTTTGCTAGTGTATTAGCAATTTTTTATACTAAATGTTTATTATATCTTGTT CTTCAGGTGACGCATGCAGACTTTAAGAAAGCAAAGGATAAAGTTATGTTTAAGAAGAAAGAAGGGGTGCCGGAAGGACT GTACATGTGA
CDS sequence (LotjaGi1g1v0700400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCAAGGAACTCCGGGCGGTTTGAACCGGCAAGGTCTACCGGGTGACCGAAAACCCGACGGCGGCGACAAGAAGGA GAAGAAGTTCGAGCCGGCGGCGCCTCCAGCACGCGTTGGCCGCAAGCAGCGGAAGCAGAAGGGCCCTGAGGCGGCAGCGC GGTTGCCGACGGTGACGCCGTTGTCGAAGTGCAAGCTGAGGCTGTTGAAGCTGGAGCGAATCAAGGACTATCTCTTGATG GAGGAGGAGTTCGTGGCCAACCAGGAACGACTCAAGCCTCAGGAGGAGAAGGCTGAAGAGGACAGATCCAAGGTCGATGA CCTTAGGGGTTCGCCGATGAGTGTTGGGAATCTTGAAGAGCTCATTGATGAGAATCATGCTATTGTTTCCTCTTCGGTTG GGCCTGAGTACTATGTTGGCATCTTGTCGTTTGTTGATAAGGATCAATTGGAGCCTGGATGCGCGATTTTGATGCATAAC AAGGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCTGTCATGAAGGTTGAGAAGGCTCCTTT GGAATCTTATGCTGACATTGGTGGTTTGGATGCCCAGATTCAGGAAATTAAAGAAGCAGTTGAGCTTCCTTTGACACATC CTGAACTGTATGAAGACATTGGTATAAAACCTCCTAAGGGGGTCATTTTATATGGAGAACCTGGAACTGGGAAGACATTG CTTGCAAAGGCTGTGGCAAACTCAACATCAGCAACGTTCTTACGTGTTGTTGGTAGTGGAGAACGAGAAATTCAAAGGAC TATGTTGGAGTTGTTGAACCAGTTAGATGGTTTTGATTCAAGGGGAGATGTAAAAGTTATCCTTGCCACCAACAGAATTG AAAGCCTTGATCCAGCTCTGCTACGTCCTGGTCGAATAGACAGGAAGATTGAGTTTCCTCTCCCTGATATCAAGACAAGG AGACGCATTTTCCAGATACACACATCAAGGATGACATTGGCTGATGATGTCAACTTAGAAGAATTTGTTATGACTAAAGA TGAGTTCTCTGGAGCTGATATAAAGGCAATATGTACTGAAGCTGGTTTACTTGCTTTACGAGAACGCCGAATGAAGGTGA CGCATGCAGACTTTAAGAAAGCAAAGGATAAAGTTATGTTTAAGAAGAAAGAAGGGGTGCCGGAAGGACTGTACATGTGA
Protein sequence (LotjaGi1g1v0700400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGQGTPGGLNRQGLPGDRKPDGGDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLM EEEFVANQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHN KVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTL LAKAVANSTSATFLRVVGSGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR RRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKDKVMFKKKEGVPEGLYM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 259 | 259 | 5.1E-261 | – | |
| PANTHER | 1 | 259 | 259 | 5.1E-261 | – | |
| MobiDBLite | 1 | 55 | 55 | - | – | |
| MobiDBLite | 17 | 35 | 19 | - | – | |
| MobiDBLite | 90 | 110 | 21 | - | – | |
| MobiDBLite | 90 | 108 | 19 | - | – | |
| Gene3D | 113 | 180 | 68 | 2.7E-28 | – | |
| Pfam | 115 | 165 | 51 | 3.8E-7 | ||
| Gene3D | 181 | 259 | 79 | 5.7E-24 | – | |
| SUPERFAMILY | 189 | 392 | 204 | 3.56E-48 | ||
| CDD | 194 | 314 | 121 | 3.18478E-14 | – | |
| SMART | 224 | 316 | 93 | 2.6E-11 | ||
| Pfam | 228 | 260 | 33 | 5.8E-8 | ||
| PANTHER | 260 | 399 | 140 | 5.1E-261 | – | |
| Gene3D | 260 | 314 | 55 | 4.1E-16 | – | |
| PANTHER | 260 | 399 | 140 | 5.1E-261 | – | |
| Pfam | 261 | 314 | 54 | 1.9E-10 | ||
| ProSitePatterns | 284 | 302 | 19 | - | ||
| Gene3D | 316 | 387 | 72 | 1.3E-24 | – | |
| Pfam | 336 | 380 | 45 | 2.1E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0700400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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