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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0705400 |
| Transcript ID | LotjaGi1g1v0705400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb-like transcription factor family protein; TAIR: AT4G28610.1 phosphate starvation response 1; Swiss-Prot: sp|Q94CL7|PHR1_ARATH Protein PHOSPHATE STARVATION RESPONSE 1; TrEMBL-Plants: tr|G7KXD8|G7KXD8_MEDTR Myb-like transcription factor family protein; Found in the gene: LotjaGi1g1v0705400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127386947..127393907) extracted from Lotus japonicus Gifu genome v1.2.
ACCAACCTCACGTGCACCCCATTAGATATTTTCTGTGTGGAAACCAATCACAGCAACCTCCAACTCCAATGCAGAGGAGT GCCAGGGTAACACCAACTTCAAACCCTTCCACGTAACCGAGAGTGCTTCTCACGCGCTCAATCAACGCGTAACACACCCA TTGGCTATTCCTCCTCCAAAAGGGGTTTGCAAAACGCACCCGTTCGTCACCACCGTTCACTCCCGCAAATTCAACCTCTG GCTTTGCCGGTGACGACGACGACGGCGGAGGAATTCACAAACACCACCACCGTCTGGTAAGAGAATTCGATGCCTCACGC AACCCATTGCTGCGTTTTTCTTCGTTATCTGTTGTTTTTCGAAAATACCCTTTGCTTCAATCTCCCGTTTTTCAATTCGC GTTGGGTCACCCCTTTTCGTTGATGATTGTTGATTTCACCAAAAAAAATTGTTTATCTATTTGATTTCCTTTGCAATTTG ATGTTAATTCCATTGATTATGAGTTTGCATGCATATTGTCATGCTTCATCATGTTATTGTTTGATTCTGGAGTGTGAATT GCTTTCAAATAATTTTTTTTTTGTCTGATGGTAGAGGTGATTTGATCAAATTTATATGCATGTGGATGATTTTGGAAGAG AATTCATTTGTCACTCTACTTGGAGAACTGTGGTTTTATGCATACAACTGATTGGCTTATTGGTTTTGTGTTTACATGAT AGAATTGTGGTTATTTGATAGCATTTGCTTAATTGTTTAACCCATCAGCTTAATGTTAGTGCATACTGTTTTGTTTAATG ATAAACTGCATAATTGTTCAATGTTCACATTATGATGATTTTCATATCTCTGATTATGGTTACTACTTGATGGGAAATAA AGGGGTTGCGTTGTGACTTATCTCTGCACCTAAACTGCAATGAAAGGCTTGAATATTTATCTTATCTGTAACTTTGAGCT TTGTGATCAGCATCTACTGTGGTTTAAGATTTTTACGATATTAATATGCTCCTTTTATTGAGTTTAGACTTGCGTTCAAG CTTGGCCTGTCTCTTTATTTTAGTTTTACTTTTGCGATGGGCTTTTATAATCTTCAGAAGCAATATTCTCACCAGCCTTG CTTCTTTTGGTTTACCTTTGATGGATGCTAAAGAGTGAAGACTAAAGAATTGTTTTTCTTTGACAGTTGAAGATTGATGA CAACTTTTCTGGTTTGGGCATCAAGAATAAAAAGCAACCTGTGTAGTATTTTGCTGGTGAGCATTTCCATCTGAGGGAAA TCGTAACAGTCTAAGCTTTTGTTAGTTGACTAGATAACTGATACTTTTATCTTTTTGACTAACAATTTAGGAAAATAATG GAAGCACGCCCTGCTCTCTCTATTGAAAGATCAAGCCCAATGCAACTCAATAACATAGGAATGTCTGGAGCACTTCCTTC ATCATTGCCTGTCCTTCCAATGCCTCTAGAAGAGACGTACCCCAAATTATCTGATTCTCACCCGGCTTTTGTGGAAAAAG AGCTTAATACAAAGCCTTTTATACATTCAAGTCACTTAAGTTCCAGCGGTGCAGTTGGGCATATGTTTTCATCTTCTCCC GGATATTCAACTGATCTTCATCACTCGTCCCTTTCACCCCATGAAAAACACTCTAGAAATGTGCATTTTATGTCACAGTC ATTGAGTAACGGGGCTCCATTGCGATCTTATGCTTCAAATAATGGACCAATACCTTCTACAACATCAACCCATTATTCTA ATGGAAACAGTGCTTCCTGGCATACAGATTCCCTGCCCAGCTTTCTTGATTTCTCAGCGAATACCTCTGTTGATACTAGT CAAGTAGAGAGCAGTGCCTGCGATATTATGGCAATTGAGGAGTATTCTAAGAGAAATGATTGGCATGAGTGGGCTGATCA GCTAATCAGTGATGATGATACTTTGACTTCCAATTGGAATGATCTTCTTGCTGACAACATTCAAGATCTTGAACCAAAGG TTAAGATTTTCTTCACTCAAATAAATATTAGCTTGCTGAGTAAACTGTCTAGCGATTTATTAATGGAATGTGTTAGAAAC TCATTTTGTTTCTTTAGATGGTGGATCGAGTTTCAAAACCATCTTCGCAATATCCGGTAGGAAACCAATCCCAAGCCATT CCACAACTTCCTGCTTCATCTGGAGAACATCATGCTGTTACTGCCCCCTCTTCCTCAGCAAATTCTGCACCTGCCAAACC ACGGATGCGTTGGACACCTGAGCTTCATGAAGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGTATGTCCA TCTTTCTTTCACTCTGCTAAGTAAGGCCTTATTTTGTTAAACTTCTGCCTCATTTTTCTTTTCCTGTTTTCTTTTTACAG GAGCTACCCCTAAGGGTGTGTTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGGTA TATGCAATTTTCTTTATCTTCCTAATGTTTATTTCCTCGCATGTTTTTGATGAATATATTTCTCCATGAAATGCAGAAAT ACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGTACATAAGATAATAAGATATGCGTTCTATTATATATACCTTAT GTATGGATAGGGTTTGGTATATTGGTTAGGACTTGGGATAAAGAGATCATGTTCTATTGAGTAACTTTTTGCAAAATTTA CCCAAGGATTAAAAGTTTTTACCAAGTAGATGATTCTCGCCAAGTTTCATGTTAATTGGAAACTACTTTGTTCTTTATCT AGAAATATGGAATTTATTTGAAGTATGGTTTTCAAACATAGGAAAATATCACCATATATAAAAGTTATCGAGTGGTGTAA ATCTCTGACATCTTACATTATTGTTTTTGTACATAATATTTTGATTCGATTTTATGTTTTAAGCTTCTCCTTTGTTTATG GTGCCATACTTTTTCCCCTTCTTTGTCTTCCTCTTTGTGCTACTGTATGAGAAACTTTTTAAGATGCAAGTTCCCATGGA TTCTTTTCCATTCCCTATATTTTTGCTTAAATTAATTGGGAAATTGCTAAATGTAGCATGTTTTAGAAGCTATGGTGTGC ATATTTAATATGACTAGAACTTTACTGATGCATGTATTGTATCCAGCAAAGTAAGACAAGGAAATTTGGCAATTTGGTGA ACAATAGCCTACTGGGGCCATATAAATAGACATAACATGTATCTTGGCATGTACTAGCAAGTCTGTCAATCCACTTCTTT ATCATTATTTTTTTTGAACACCAAAAAGAATTGGAGAGTTTTGAATTTTCAAATAACTACTGAAGTACCTATTAACTCTA ATTTTTTTATTTTTAAATTTAGGTTAAGATTTGTATATTGGAGTGGCAAATTAGACCGAAGAATATGAAATCTGTTATTG ACCTGGCATTGTGCTTTTGATGCCTGGAAGTAGTGTCTTTTTAATATCTTCCTTGAAATCTAGAGAAATGCTCCTTCCTT TGCAGTCATATAATGTACATTTTTTTAATACTTTTGGCAGGAGCTACAGATAGAAAACTAAGCCCCATTGAAGATATGTC ATCTCTAGATTTGAAAACGTAAGCAACTATCTACTGCTACTTTAAGTAACTTCTGTTATTTAGTATTTCTGTATTTCTAT GACAATTGATACATCAAACTGTTAGACAACACTTTGTTCTCTATTGTGACCTTACCAATACAAACACTCTGCACAGATTT TAGATAATTGGAGTGTCAGTAATCAAAATTAAAAGAAAGAAAATAAGGAAATCTTAATGAATATCCTTTTTCAACTCTGG ATCGATGGGTATTGAGTCGAGAAGAAAAAAAAGTTACACCTGGGAATTTGAGAGCTTGGCCTCTCCCACTCTAAATCCAA TAGACCAACTAACCACCTTCCTTTACATTTGCTGTCTCTATTTATCGAGTGCTAGCTATTTAACTGCTCTAACAACTTTC CTAACTAAGCTTGCCCATAACTAATTGGGGCTTGTTCCTAACACAGTAATTATCCATATCTTATCACTAAACATGAGAAA ATAACATATTAATAGAAAATTAGAGAATCTTAAAAAATAAATCAGGCATAAAATAAAATAAAATAAAAGGTGGACTTTTA CATAGACCATTAATACAGCCTGCAGAAAGGTTCTTAGTTGATTACTTAATTATAATATAAGGATCAGGAATGGACTTATT TTAGAGTTCACAGGGGTCCAGGATTAAGGGTTCAAGTGGATTAATATTCAATGGGATTTATGTATGTTTTCGGTCAGATT TCATACATAGTTAAATGTTATGCTGACCTTTCCTGCATTGTTGACAGTGGTATTGAGATCACTGAAGCCCTACGAATGCA GATGGAGGTTCAGAAGCGATTGCATGAACAGCTTGAGGTACAAAGTTTGTTCTTTCAAGAATTTCCTTCTGATATGTTCA TTCATCATTTATAGCTTAATAATTGGTTAGAACTTAGAATACACTTCTTATAGGACTTACTAGTTTTTTGAACTTCAACT GAGGTTTAAGAGACTGTGAAATAAATTCATATTAATAAAGGAGTTAATATATGTAACTAACTAACTATTTCTCTCATTTC TTTTATTCCTTTTTTTAAAAGTGTAAAGTTGTCAATTAGTGTCTTAGTTGTCAAATTATAGTTTTCATAATATGATCAAT ATAACATGCATTAAATATATGTATCACAGTAGTCATTAGATTAGTTTCATTTGATATATCATTGTAGATACTTGCGGTCC TTTATAACCAAAGAACTCATTAAGGAAGGAATAGAAAATTGGGGGATCATTAGTCCTCTAAAGTCCAAAAGCTACAAAGC AAACAACAGCAAAAGAACAAGGGAAAAAAATCAGCACAAAACAGCAACCAAGCCCCTTTGCAAGTATGATTCAGAAGCAC CCTTAAAAATGAGGGGAAACCGCAAAGAGGCTATTATATTGTATGTTTGGATTTAGCAGAATTAGTTCTAATAAACTAGG CTGTCCCATAAAAGTTGAGGTCGAATATAAATTTTGCTAAAATGTCTGGGATGAGATTATTTCTAAATAAACTGGAGGAG GTTGCCAAAACACCGAAGAGGACACTGCCAAAACATATTTTTCCCCTTTCTACTACCCAAACCTTTATAACCTGCAAATC ATGCAGATATATCCAGCTACCTCTAAATGGCCTAAATGGTTTAACCAGAATTGCCAAGCTACCCCACAAAGCAAAAATAG GCAATGCTAATTCTTTTCATGCTCTTATTCATTGAAATTCAGTTATTTCTCTTTATATGGATTTGAAATTGGATACTAAC CATACACACAACATATTCATTTATAGGTGATTCCCATATCATTGATTTGTTGAAGAGATAGACCTATCCTCTCTTAGACC CACGGTTTCTTTTTTCCCTTTTGGGGAGCAAAAAACATATGGCTACTATATTCTCCTGGAGCATGGAACTAATTTTTGTG ACATTATTTGACATGTAGGTTTATGCGTGTAGAAATTAGGGTCATGTGCTTCTTATATCACATGCATGAATTATCCAAGG CATTACACTTGTTCTCTTATGTCTATTGTGCCTCTTTTACAATCTAATAACAGTTCTCCCCTTTATCTTTTGTGTTAGAT TCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATTTTTGAGAAGCAATGCAAATCTGGCG TTGAACCATTTAAGGCATCATCATCTGCCATTGAGAGTGTATCTGGAGTGTCTTCAGATGCCTTAAAAGATTCTCCTGAC AAAACCGAATTGGAAGCATCCAAAGCGAACCATTGCAGGTCTGATCAAGCTACTAATGGCAGTACTGTAGTTGACGGAAG CGCCCAGGAAGCGGGTGAGAAGCAGGATGCTCCCGAAAGTCAAGCTTCCGAGAATCCTAAGCAAATTGCTGATGAAGATG GTGCTCAAGCCCCCAAGCGTGCAAGGACAGATGAGTAAGCTTTATGATCTGCTGAATCAGCGTTAAACTGACAAGATAAT ACTGATTCGTTTTAAGATTTTGTTTTATTGAGGAAGACTTGGTTAATTGAAGCCTAGAGACTTAACAAGTGCCTCCTGTC CTGTTGTGTTCATGGGAGCTTTGTATTTACCTTCTATTTAGTCACAAATGATGAGTCAAAGTTTTGATTATGACGTTCTT TAACATGTTATCTTGTTCGGTATCCTGGTTAGGACGGGATTATAGTGTACAGTATGGGTATGGCTACACCTCAAATCATA GGTGAGGAATTAGGACAATATCTTACCAACATCCTGAATCCAATCTAAGTTGGTATGTACTACATCTCTAATATGAACTG TGTTTTAACTCTACCGAAATAAAAAGGGTCCAATTCTAGTTTTAAGTTGTATCGTCTTACCACTTATGGTGCTGAAGAAC ATATTTGCAGGTGGCCCTAATAATGGTTAGTGGCTATTCTATTTCTATTTCTAGTCAAATATTTGTGTAACATGAATGCA TTTTATTTGGCCATTTGTATCGCATACCTTTCCATTGGAACATGTTGGTGCTGCAGCCAGGAAGGCAATGGAAGGCCTCT AGTCTTAGCCAGACAAGGGAAAATTGATACCTAATAACAATAACTATTTAAGGCTTAGACCATTTTACAATTTAAGCCGC TTTCATGTGCTTTTATTCAAGTGAAATAAATGTACATTAGAGAAAACTAAAGCAATGTATAGTTATACGAACATTAAAAA AAGTATAGTTGTACGATTTAAATCGCATTTCATCCAAGAAGAGAGTTTAAATGGTATAATAAAGGGCAAAGTGCACGAAA GCAACACCTATGCGGCTATGCCAACTCATTGTTTTAGGTATCAATTTTCCCTGCACGAGAACTTCCATGCACGAGACCCA C
CDS sequence (LotjaGi1g1v0705400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCACGCCCTGCTCTCTCTATTGAAAGATCAAGCCCAATGCAACTCAATAACATAGGAATGTCTGGAGCACTTCC TTCATCATTGCCTGTCCTTCCAATGCCTCTAGAAGAGACGTACCCCAAATTATCTGATTCTCACCCGGCTTTTGTGGAAA AAGAGCTTAATACAAAGCCTTTTATACATTCAAGTCACTTAAGTTCCAGCGGTGCAGTTGGGCATATGTTTTCATCTTCT CCCGGATATTCAACTGATCTTCATCACTCGTCCCTTTCACCCCATGAAAAACACTCTAGAAATGTGCATTTTATGTCACA GTCATTGAGTAACGGGGCTCCATTGCGATCTTATGCTTCAAATAATGGACCAATACCTTCTACAACATCAACCCATTATT CTAATGGAAACAGTGCTTCCTGGCATACAGATTCCCTGCCCAGCTTTCTTGATTTCTCAGCGAATACCTCTGTTGATACT AGTCAAGTAGAGAGCAGTGCCTGCGATATTATGGCAATTGAGGAGTATTCTAAGAGAAATGATTGGCATGAGTGGGCTGA TCAGCTAATCAGTGATGATGATACTTTGACTTCCAATTGGAATGATCTTCTTGCTGACAACATTCAAGATCTTGAACCAA AGATGGTGGATCGAGTTTCAAAACCATCTTCGCAATATCCGGTAGGAAACCAATCCCAAGCCATTCCACAACTTCCTGCT TCATCTGGAGAACATCATGCTGTTACTGCCCCCTCTTCCTCAGCAAATTCTGCACCTGCCAAACCACGGATGCGTTGGAC ACCTGAGCTTCATGAAGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGTTGA AGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCA GAGTCATCTGAAGGAGCTACAGATAGAAAACTAAGCCCCATTGAAGATATGTCATCTCTAGATTTGAAAACTGGTATTGA GATCACTGAAGCCCTACGAATGCAGATGGAGGTTCAGAAGCGATTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGT TGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATTTTTGAGAAGCAATGCAAATCTGGCGTTGAACCATTTAAGGCA TCATCATCTGCCATTGAGAGTGTATCTGGAGTGTCTTCAGATGCCTTAAAAGATTCTCCTGACAAAACCGAATTGGAAGC ATCCAAAGCGAACCATTGCAGGTCTGATCAAGCTACTAATGGCAGTACTGTAGTTGACGGAAGCGCCCAGGAAGCGGGTG AGAAGCAGGATGCTCCCGAAAGTCAAGCTTCCGAGAATCCTAAGCAAATTGCTGATGAAGATGGTGCTCAAGCCCCCAAG CGTGCAAGGACAGATGAGTAA
Protein sequence (LotjaGi1g1v0705400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEARPALSIERSSPMQLNNIGMSGALPSSLPVLPMPLEETYPKLSDSHPAFVEKELNTKPFIHSSHLSSSGAVGHMFSSS PGYSTDLHHSSLSPHEKHSRNVHFMSQSLSNGAPLRSYASNNGPIPSTTSTHYSNGNSASWHTDSLPSFLDFSANTSVDT SQVESSACDIMAIEEYSKRNDWHEWADQLISDDDTLTSNWNDLLADNIQDLEPKMVDRVSKPSSQYPVGNQSQAIPQLPA SSGEHHAVTAPSSSANSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRP ESSEGATDRKLSPIEDMSSLDLKTGIEITEALRMQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMIFEKQCKSGVEPFKA SSSAIESVSGVSSDALKDSPDKTELEASKANHCRSDQATNGSTVVDGSAQEAGEKQDAPESQASENPKQIADEDGAQAPK RARTDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 60 | 468 | 409 | 1.3E-168 | – | |
| PANTHER | 60 | 468 | 409 | 1.3E-168 | – | |
| MobiDBLite | 219 | 262 | 44 | - | – | |
| MobiDBLite | 223 | 239 | 17 | - | – | |
| MobiDBLite | 246 | 260 | 15 | - | – | |
| Gene3D | 257 | 319 | 63 | 6.3E-29 | – | |
| ProSiteProfiles | 258 | 318 | 61 | 13.061 | ||
| SUPERFAMILY | 259 | 315 | 57 | 3.94E-18 | ||
| TIGRFAM | 261 | 315 | 55 | 6.7E-25 | ||
| Pfam | 263 | 314 | 52 | 7.5E-9 | ||
| Pfam | 346 | 393 | 48 | 5.5E-26 | ||
| MobiDBLite | 406 | 486 | 81 | - | – | |
| MobiDBLite | 417 | 431 | 15 | - | – | |
| MobiDBLite | 432 | 468 | 37 | - | – | |
| Coils | 483 | 486 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0705400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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