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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0732500 |
| Transcript ID | LotjaGi1g1v0732500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like kinase; TAIR: AT1G03440.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1; TrEMBL-Plants: tr|I1N9D1|I1N9D1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0732500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130416670..130418613) extracted from Lotus japonicus Gifu genome v1.2.
GTTAAGTGTTAAACGGGCTTTATTTTCACTATCAAACACTGTTTCTTAGCATTAAAAAAATCCATATATGGCAAGCTCCT TGTTCGGACAACGGTTTGATTATCCACCTGTTAAGAAAAACAATGTCAAAACCAACCAGTGAGCAATTAAAACAACAAAG AGTGTAACACTGTGGTGGTGGTGGTTTGTGGCGGTGATTGCATTGCACCTTGTGATAGAAGCCAAAATCATAAAAAAGCA AAAAGCAAAAACCACATCATCGATTCAGTAACAATTTGCTTCACCTCAAAGCCTAATTAAACCATCCAGCTATACAGTTA GTTGAATCATTTCATGATCCTTATTTTCTGATACTTCAGTGCCGCCATTAAACGTTCTCACGAGAAAGCAAAAAGAAAAA GAAAAACCGCCACAACCATGTTACTATAAAGCCCAGCAAAGCGTTGTTTCCTTCTTCTTCAAGTTCCTAGAATGGACATT GCTTCTTCTTCCTGTTATTCTCTGCTTTTCCTCTGTTTCCTTCATCAATCTGCACAAGCCTTATTGGACCCCACCGATTT CTTGGCCCTTCAATCCATTCGCAAGGCGCTTCACGATGTACCAGGTTCCAGTTTCTTCTCTTCTTGGGACTTCACTGCTG ATCCTTGCAACTTCCCCGGCGTTCTCTGTGATTCTGATAAGGTCATCGCACTCAGCCTCGGCGAACCGCGAGCTGGTTCG CCGGGTCTCACCGGGAAACTAGACAATGCTGTCGGAAAGTTGTCTTCCCTCGCTGAATTCACTGTTGTTCCCGGCAGGAT TTATGGTCATCTTCCACAGTCTCTCTCCCAGCTGAAGAATCTACGGTTTCTTGGCGTCAGCCGGAATTTCATCTCCGGTG AGATTCCGGCTGGGTTAGGCCAGCTCCGAAGCCTTAGAACAATCGATCTCAGCTACAACCAGCTCGCCGGAGCTATTCCT CGGTCGATCGGAGCCTTGTCGGAGCTGACCAACTTGGCACTCAGCCACAATCACCTCTCCGGTTCGGTTCCCTCATTCTG CTTGGCTCAGTCATTAACCCGGCTCGACCTCAAGCACAACATGTTGTCCGGTTCGCTTGCGCCCGATTCTCTTCCTCCTT CCCTCCAATACCTCTCACTTTCCTGGAACCGGTTCACTGGACCGGTGGACCGAGTGCTTACCCGACTCAATAACCTCAAC TATTTGGACCTCAGCTTGAACTGGTTCACCGGCCCAATTCCTGCTCAGCTCTTCTCTTTCCCACTAACAAGCCTTCATTT AGAAAGGAATCAATTCACCGGTTCGGTCCAACCGTTGAACGAGGTAACGATCCAGACCGTTGATTTGAGCTATAACCAGT TCTCGGGTGAAATATCCCCCATGCTAGCTAGCGTGCAACACCTTTACCTAAACAACAACAAGTTCATTGGTCAAGTTCCG GGTAGCTTCGTAGAGCGGTTAATGACAGCAAGTATTCAAATATTATATCTGCAACACAATTACCTCACTGGAATTGCGAT AAGCCCGACGGCAGAGATTCCAATGAGCAGCACCCTGTGTTTGCAGTATAATTGTATGGTGCCGCCGCCACAGATGACAT GCCCCGTCAAAGCGGGTAACCAGAAAATCAGGCCGGCCCAGCAATGCCACAACCATTGAAGCCTCGTTTCATACATATAT CACACAATTTTATCACCATATGTTAAAACTATATATTATAGAGCTTTTGTTTTCTTTCTTGTGTATTCAATTATTCTTTT AGACTTTTTGACCCGTTATCACTATAAATATTATTATCGATTATTTAATTTATGATTGTGAATAGGGGATCGAGATTTTG TCCCATTTTCCAGCCTCAATGGATGCTCTGTGATTTAAGTTTTCTACCCCTCTTAACTTTGTTATCTTGACAGACAGTAT GTTTTGTAAAGATGTAATCATGCC
CDS sequence (LotjaGi1g1v0732500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACATTGCTTCTTCTTCCTGTTATTCTCTGCTTTTCCTCTGTTTCCTTCATCAATCTGCACAAGCCTTATTGGACCC CACCGATTTCTTGGCCCTTCAATCCATTCGCAAGGCGCTTCACGATGTACCAGGTTCCAGTTTCTTCTCTTCTTGGGACT TCACTGCTGATCCTTGCAACTTCCCCGGCGTTCTCTGTGATTCTGATAAGGTCATCGCACTCAGCCTCGGCGAACCGCGA GCTGGTTCGCCGGGTCTCACCGGGAAACTAGACAATGCTGTCGGAAAGTTGTCTTCCCTCGCTGAATTCACTGTTGTTCC CGGCAGGATTTATGGTCATCTTCCACAGTCTCTCTCCCAGCTGAAGAATCTACGGTTTCTTGGCGTCAGCCGGAATTTCA TCTCCGGTGAGATTCCGGCTGGGTTAGGCCAGCTCCGAAGCCTTAGAACAATCGATCTCAGCTACAACCAGCTCGCCGGA GCTATTCCTCGGTCGATCGGAGCCTTGTCGGAGCTGACCAACTTGGCACTCAGCCACAATCACCTCTCCGGTTCGGTTCC CTCATTCTGCTTGGCTCAGTCATTAACCCGGCTCGACCTCAAGCACAACATGTTGTCCGGTTCGCTTGCGCCCGATTCTC TTCCTCCTTCCCTCCAATACCTCTCACTTTCCTGGAACCGGTTCACTGGACCGGTGGACCGAGTGCTTACCCGACTCAAT AACCTCAACTATTTGGACCTCAGCTTGAACTGGTTCACCGGCCCAATTCCTGCTCAGCTCTTCTCTTTCCCACTAACAAG CCTTCATTTAGAAAGGAATCAATTCACCGGTTCGGTCCAACCGTTGAACGAGGTAACGATCCAGACCGTTGATTTGAGCT ATAACCAGTTCTCGGGTGAAATATCCCCCATGCTAGCTAGCGTGCAACACCTTTACCTAAACAACAACAAGTTCATTGGT CAAGTTCCGGGTAGCTTCGTAGAGCGGTTAATGACAGCAAGTATTCAAATATTATATCTGCAACACAATTACCTCACTGG AATTGCGATAAGCCCGACGGCAGAGATTCCAATGAGCAGCACCCTGTGTTTGCAGTATAATTGTATGGTGCCGCCGCCAC AGATGACATGCCCCGTCAAAGCGGGTAACCAGAAAATCAGGCCGGCCCAGCAATGCCACAACCATTGA
Protein sequence (LotjaGi1g1v0732500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDIASSSCYSLLFLCFLHQSAQALLDPTDFLALQSIRKALHDVPGSSFFSSWDFTADPCNFPGVLCDSDKVIALSLGEPR AGSPGLTGKLDNAVGKLSSLAEFTVVPGRIYGHLPQSLSQLKNLRFLGVSRNFISGEIPAGLGQLRSLRTIDLSYNQLAG AIPRSIGALSELTNLALSHNHLSGSVPSFCLAQSLTRLDLKHNMLSGSLAPDSLPPSLQYLSLSWNRFTGPVDRVLTRLN NLNYLDLSLNWFTGPIPAQLFSFPLTSLHLERNQFTGSVQPLNEVTIQTVDLSYNQFSGEISPMLASVQHLYLNNNKFIG QVPGSFVERLMTASIQILYLQHNYLTGIAISPTAEIPMSSTLCLQYNCMVPPPQMTCPVKAGNQKIRPAQQCHNH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| PANTHER | 13 | 393 | 381 | 6.3E-165 | – | |
| PANTHER | 13 | 393 | 381 | 6.3E-165 | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 395 | 372 | - | – | |
| Gene3D | 26 | 189 | 164 | 9.6E-37 | ||
| Pfam | 27 | 67 | 41 | 1.2E-8 | ||
| SUPERFAMILY | 27 | 369 | 343 | 3.17E-50 | – | |
| Pfam | 123 | 182 | 60 | 3.4E-7 | ||
| Gene3D | 190 | 281 | 92 | 2.2E-18 | ||
| Gene3D | 282 | 370 | 89 | 6.7E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0732500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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