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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0733000 |
| Transcript ID | LotjaGi1g1v0733000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7KDY8|G7KDY8_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0733000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130462414..130465938) extracted from Lotus japonicus Gifu genome v1.2.
AGCTGTAAGCTACTTTGTTTTAAGAAAGCATATAGTAATAATAACTCAATGAGCATCCAGCATTATTTCATATAAAAACC CCATAGTTTTTTAAGAACAGCACCATGTGACGCTTGTCATCCCAAGTCCCAGTTTGATTTGTTTAAGAAAACATGTAATA ATCTGTGTGAACGTCATAAAGTGATTTCAGCATAAGTTATTTGTTAATTATATACCTGCGACCCTGTTTCTGGGAGTCAG TTGCAGAGGTTGTCTTGCAATTGTTTGTGTTAATTCATCAGTGCTCAATGGCTAAAGAAGGAGTTGTTCTTCCATATTCA ACAGGTAGATGGGCATACGACGTGTTCCTGAATTTCAGAGGAGCGGATACTCGTGATGGATTTACAAGCGTTCTCTACAA ATCTCTGAAAGAAAGAGGAATCCGAACCTTCTTCGATGACGATGAGCTTTCAAGAGGGAAAGAGATCAAGTCCTCCCTCC TCAGAGTCATCGAAGAATCCATGATTGGCATAGTGATATTTTCACCAAACTACGCTTTCTCAGCTTATTGCTTGGATGAA CTTGTCCACATCTTAGATTGCTGCAAGGGTCACGATCGGTTGGTTTTGCCAGTGTTCGTGGATGTGGATCCTTCACATGT AAGGTATCAGGTAGGGACTTATGGTGATGCCATGGCCAAGCATGAAGACCACCACCGCGTTGACCAACCCAAACTGCAAA AATGGAGACAGGCTTTAGCTGATGCAGCTGATTTGTCTGGCTGGCATATCCAACAAGGGTATGTATATATTTTTTATTTC AATGATACATTTTTGTGGGTTGAGAGTTTTGATTCATTTATTTACACTTCACTGTTTTTCATTCAATTTTCAATTATTGT TTCTCTATTTAGCTCCTTTTTTATCAATTCACTTATTTTTTTTTATATCTATTTGTGGGTATGGGTGGAAATTAAATGAG GTTTCAACCAAACTTTTTCCTCTGTTTTGTAAACTACCATTTCAGAAATTTTGTATCATTCTATTTTCTTTCACATGACA TAGTCGTATGTATGTCATGTGAGATTAACACATGAGGGAATCCAAATCTGCACACAGATCAAATGCTCTACTAATTAAGA ACCAAATCGACCAAACTAATAACCAACTCACAACTAACTAAACGCCTAAGTAACAAACTAGCTCATTAAGAAAAGAAAAA ATGATTCAAATTAATTAGCAATCACAATTTCATTTTCTGTAATTTGACAGGTCTAAGTCTGAATTTACCTTTATTCGAAA GATTATTGGAGAGGTTTCCAGAAGAATCAATCGCAACCATCTGCATAATATTGGTAACCACCTAGTTGGACTGGAATCTC GGGTGCATGATGTAACAACACTTCTTGAGTTGGAGTCTGACCAGAAAACCATCATGGTAGGGATTTGTGGATTAGGTGGA ATAGGAAAAACAACACTTGCTCAAGCTGTATTTTGTTCGATTTCTGGTCAGTTTGAAGGCATATGTTTTCTTGCTGATGT TAGCCAGAAATCGCATGACCTTGGCCTAGTCAGACTGCAGGAGACACTCCTTTCTGATTTAGTTGATGAGAAGAACATCA AGTTTACAGATCCAAGGGAAATAATTCCGACAATAAAACACAGGCTCCGGCAAAAGAAAGTTCTTTTGATTCTTGATGAT GTTTGGGATATGGTAGAGTTGGAGTCATTAGCTGGAGATTGTGATTGGTTTGGTTCCGGTAGCAGAGTGATTATAACCTC AAGGAACACACATTTGCTTAATTCCCATGGTGTTGACAGACAATATAAACTCCAGACATTGAATGAAGAAGAAGCTTTTG AGTTATTTTGTTGGAAGGCCTTTGAAAATAAAGAAGCAAATCCAATTTATATGGAACTATCAAAAAGTGTAGCGAGTTAT TCCCTTGGAATTCCACTGGTTTTGGAATTGGTTGGTTCTGACTTGTTTGATAAGCCAATTGCTGAATGGGAATCTCTCTT GGACAAATACAAAAGATATGATCCAAGAGATATTCCAGGGCTCCTAATGATCAGCTACCAAAATTTGGATGATGATGTGA AAACAATCTTCCTTGACATAGCATGTTGCTTCAATGGTTACAAAGTGGAATATCTTACTGATTTGTTGTTAAATGGTCGT GGTTTCTCTCCAAAATACGCTTTACAAGTGTTGATTTCCAAATCATACATAAAGATAGAAGACGGTGTTGTTAGAATGCA TGACTTGGTGCAAGACATGGGTAGGGCATTTAATCACAGGGAATCACGTTCACAGCCTGGTAACAGCAAAAGATTATGGT TCTATCAAGATATTCTCAATGTTCTTAATAACAATATGGTACGCTCTATCGAACTGCATGGTTTTTCTCTGTTTGAATTC CCTTCAGTTTCCTATTTTGATGAATATATATCTCATGACATGGGTGACTATGGCTTTGAAGGGAGGTCCTGCTGTTGAAA TCATGAAGATTGACTTGCCTAAACATGAAGAAGTGATTTGGGATGGAAATGGTTTCAAGAATCTGGAAAACCTCAAAATT CTTGAAATTATAAATGCACGCTTTTCAGAAGTTCCCAAGATCTTCCCAGATGATTTGAGAGTGCTGAATTGGAAAGGATA CTTCAAGGGAGCAAACTACAAGAATCAACATAGTGGGAATACTTCTGGTTGTTGCAATATACTTTAGATAAACCATTGCT TATTTGCAAATGTATTTTTCTCTTTTCTTGTAATAGCAGAATTAACACTAGCTGTTACTTAAAATTACAACGACCCTCCT CAAGCTATGCTGTACCTGGAAAGTGCAAACCCCCCTGCACTTTATACTGCATGTCACTTTCCTAGTTTCTCTCTCTCTCT CTCTCTCACACACATATATATATATATATATATATATATATATATATATATATATATTTAATGGTGGATTCTACCATACC CCCAATGTATGATACAAGACTGACGCATTATGTCGTGTACCAATGGGGGATCGACACCTGGCACCGTATTTAAATATGTG TTTCAATTTTAAACATATACCGTAAAAAAAGAAAAAAGACATATTTATTATTCCTTATTATTATATCCCACTTGAGTTAA GGTTAGTGAACCCGTGTGGGCCCCATGTGGTTAACACATTTCCAGGCTTTGAATTTCTGAGAGGGAAATTGAAGTGGGTT GTCACTTTTGGAGGGAGCATAAACAAAGAGTGCACGGCGGTGAAGGTGACAACGGCGGCGAAGGGTTTGTTATCGGCGTT GAAGCCTCCACTCTAAGCAGCGAAGGCTTGTTGGACAGCTCCTGAAGCTATTTGAAGTGTTTGTTTGTGGGTTTCTTTCC GGATTCGACATTTAGGGTTCTAAGCTATTTTGTGTTGACGTAAGTCCTTCTCCTCTTTATTTAGTAATTGTGTGTGTCTC TTTCGATTTATTTGTTTTTCAAGGTTAGGTCTTTCTGAAATGGTGAATTTAGGTTGTGTTTGTTGTGCTGATTTAGTTGA GGTTG
CDS sequence (LotjaGi1g1v0733000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAAAGAAGGAGTTGTTCTTCCATATTCAACAGGTAGATGGGCATACGACGTGTTCCTGAATTTCAGAGGAGCGGA TACTCGTGATGGATTTACAAGCGTTCTCTACAAATCTCTGAAAGAAAGAGGAATCCGAACCTTCTTCGATGACGATGAGC TTTCAAGAGGGAAAGAGATCAAGTCCTCCCTCCTCAGAGTCATCGAAGAATCCATGATTGGCATAGTGATATTTTCACCA AACTACGCTTTCTCAGCTTATTGCTTGGATGAACTTGTCCACATCTTAGATTGCTGCAAGGGTCACGATCGGTTGGTTTT GCCAGTGTTCGTGGATGTGGATCCTTCACATGTAAGGTATCAGGTAGGGACTTATGGTGATGCCATGGCCAAGCATGAAG ACCACCACCGCGTTGACCAACCCAAACTGCAAAAATGGAGACAGGCTTTAGCTGATGCAGCTGATTTGTCTGGCTGGCAT ATCCAACAAGGGTCTAAGTCTGAATTTACCTTTATTCGAAAGATTATTGGAGAGGTTTCCAGAAGAATCAATCGCAACCA TCTGCATAATATTGGTAACCACCTAGTTGGACTGGAATCTCGGGTGCATGATGTAACAACACTTCTTGAGTTGGAGTCTG ACCAGAAAACCATCATGGTAGGGATTTGTGGATTAGGTGGAATAGGAAAAACAACACTTGCTCAAGCTGTATTTTGTTCG ATTTCTGGTCAGTTTGAAGGCATATGTTTTCTTGCTGATGTTAGCCAGAAATCGCATGACCTTGGCCTAGTCAGACTGCA GGAGACACTCCTTTCTGATTTAGTTGATGAGAAGAACATCAAGTTTACAGATCCAAGGGAAATAATTCCGACAATAAAAC ACAGGCTCCGGCAAAAGAAAGTTCTTTTGATTCTTGATGATGTTTGGGATATGGTAGAGTTGGAGTCATTAGCTGGAGAT TGTGATTGGTTTGGTTCCGGTAGCAGAGTGATTATAACCTCAAGGAACACACATTTGCTTAATTCCCATGGTGTTGACAG ACAATATAAACTCCAGACATTGAATGAAGAAGAAGCTTTTGAGTTATTTTGTTGGAAGGCCTTTGAAAATAAAGAAGCAA ATCCAATTTATATGGAACTATCAAAAAGTGTAGCGAGTTATTCCCTTGGAATTCCACTGGTTTTGGAATTGGTTGGTTCT GACTTGTTTGATAAGCCAATTGCTGAATGGGAATCTCTCTTGGACAAATACAAAAGATATGATCCAAGAGATATTCCAGG GCTCCTAATGATCAGCTACCAAAATTTGGATGATGATGTGAAAACAATCTTCCTTGACATAGCATGTTGCTTCAATGGTT ACAAAGTGGAATATCTTACTGATTTGTTGTTAAATGGTCGTGGTTTCTCTCCAAAATACGCTTTACAAGTGTTGATTTCC AAATCATACATAAAGATAGAAGACGGTGTTGTTAGAATGCATGACTTGGTGCAAGACATGGGTAGGGCATTTAATCACAG GGAATCACGTTCACAGCCTGGTAACAGCAAAAGATTATGGTTCTATCAAGATATTCTCAATGTTCTTAATAACAATATGG GAGGTCCTGCTGTTGAAATCATGAAGATTGACTTGCCTAAACATGAAGAAGTGATTTGGGATGGAAATGGTTTCAAGAAT CTGGAAAACCTCAAAATTCTTGAAATTATAAATGCACGCTTTTCAGAAGTTCCCAAGATCTTCCCAGATGATTTGAGAGT GCTGAATTGGAAAGGATACTTCAAGGGAGCAAACTACAAGAATCAACATAGTGGGAATACTTCTGGTTGTTGCAATATAC TTTAG
Protein sequence (LotjaGi1g1v0733000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKEGVVLPYSTGRWAYDVFLNFRGADTRDGFTSVLYKSLKERGIRTFFDDDELSRGKEIKSSLLRVIEESMIGIVIFSP NYAFSAYCLDELVHILDCCKGHDRLVLPVFVDVDPSHVRYQVGTYGDAMAKHEDHHRVDQPKLQKWRQALADAADLSGWH IQQGSKSEFTFIRKIIGEVSRRINRNHLHNIGNHLVGLESRVHDVTTLLELESDQKTIMVGICGLGGIGKTTLAQAVFCS ISGQFEGICFLADVSQKSHDLGLVRLQETLLSDLVDEKNIKFTDPREIIPTIKHRLRQKKVLLILDDVWDMVELESLAGD CDWFGSGSRVIITSRNTHLLNSHGVDRQYKLQTLNEEEAFELFCWKAFENKEANPIYMELSKSVASYSLGIPLVLELVGS DLFDKPIAEWESLLDKYKRYDPRDIPGLLMISYQNLDDDVKTIFLDIACCFNGYKVEYLTDLLLNGRGFSPKYALQVLIS KSYIKIEDGVVRMHDLVQDMGRAFNHRESRSQPGNSKRLWFYQDILNVLNNNMGGPAVEIMKIDLPKHEEVIWDGNGFKN LENLKILEIINARFSEVPKIFPDDLRVLNWKGYFKGANYKNQHSGNTSGCCNIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 10 | 183 | 174 | 1.1E-60 | ||
| SUPERFAMILY | 11 | 159 | 149 | 1.96E-40 | ||
| PANTHER | 14 | 608 | 595 | 8.2E-203 | – | |
| PANTHER | 14 | 608 | 595 | 8.2E-203 | – | |
| ProSiteProfiles | 15 | 156 | 142 | 24.485 | ||
| SMART | 16 | 156 | 141 | 1.7E-37 | ||
| Pfam | 16 | 181 | 166 | 1.9E-43 | ||
| SUPERFAMILY | 181 | 447 | 267 | 4.29E-62 | ||
| Gene3D | 184 | 349 | 166 | 1.1E-32 | – | |
| Pfam | 202 | 418 | 217 | 4.9E-33 | ||
| PRINTS | 219 | 234 | 16 | 7.7E-20 | – | |
| PRINTS | 295 | 309 | 15 | 7.7E-20 | – | |
| PRINTS | 388 | 402 | 15 | 7.7E-20 | – | |
| SUPERFAMILY | 425 | 529 | 105 | 4.08E-11 | ||
| PRINTS | 559 | 575 | 17 | 7.7E-20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0733000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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