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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0752400 |
| Transcript ID | LotjaGi1g1v0752400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Germin-like protein; TAIR: AT1G09560.1 germin-like protein 5; Swiss-Prot: sp|Q6I544|GL52_ORYSJ Germin-like protein 5-1; TrEMBL-Plants: tr|I1NBL9|I1NBL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132495525..132501642) extracted from Lotus japonicus Gifu genome v1.2.
TATTGAGAGAAAAATTTAAATGCGAGGTCTTAATTTGTAACTTTTGAAAATGAGACCACATCTCGTCCTTCTCCAACCCA ATTTTTTTTCAAAAAAATAGAATCTTCTGACTTTTAAAGGGGATAATGAAACCGAGCATGTTGGGTGCTTTTAATTCACA GATGGAGGATTTATTCCACCATTTGCCTATATCAAACTAGCTAAGGGATATATATTATGGAAAATAGGATTGTTTACCAA AACTAGTTGTTAGGGAAAAGAGTTAATTTACCATTTATAAACACATATTTTCGTGCTAAGTTATTAACTTGTAGTTAATG CACTTTTATTTATTCAACGTCTGACATATCTGTCAAAAGCTTGCTATAAATGTCAAAACCCCTCATCCAAACCATTCAAA CTTTCTTTGCTTAATTTTTCTATCTCTGTCTCTGTGTTTTGGCCTACTTATTGGATTCACAAGTTTCTGGGTTTTGCATA TCATGAAGCTGGTGGTGTTGCTGCTTCTGACATTGACCACCTTCACTGCAGCATCAGATCCTGATTCTCTACAAGATATC TGTGTCGCAGACCTATCCTCCGGTATTCATAGCATAGAGCACAATAACATGATGCATACTTTCATGATTTTAACATTGAG ATTTAGCTGCAAAATAAACCTTTTTATTTCACTTTTCCTCTTTATCATTAAAGTTGATCATTAGCTGCTAATGTTTAATC ATAAAGTATATGATTAAGTTTTCTTTGTCCCTAACCTCCATGCCTGTAATTAAGCAGAAACAATCAATCATTGCATGTTA AGTTTCACGAATTTGCATACTTAGAAGCTAAGTGCATATTTGGAATATGTTTACAGTTGACTCTAAAGTCAAAATTAATT TTGAATAGAAGCTTCTATGAGTTTTTGAATACATGACAGAAATGATTATGTGATAAGAAAAGATGGAATCAGACATACTA TTAAACTATGTCATTAATTCAATTAAATAGCAAATCCCAGAAATCATGATTGCATACTTTTGTAACATGTATTCATGCTA AACATTAGTAGGTGTTTCTTTTTTTGTCAATTCATATTCATTCTTGAAGAATTGTGATTGCAACAGCAATTAAGGTGAAT GGATTCGTCTGCAAAAGCGCTTCCGCAGTAAAAGAAACTGATTTCTTCTCAGCCATACTAGCCAAACCAGGTGCAACAAA CACCACCTTCGGCTCTGTGGTGACCGGAGCCAACGTTGAGAAAATCCCAGGACTCAACACTCTTGGCGTGTCGATTTCAA GGATTGATTATGCCCCCGGCGGCCTCAACCCACCTCACACTCACCCACGTGCCACCGAGGTGGTGTTTGTGCTCGAAGGA CAATTAGATGTGGGGTTCATCACCACAGCCAATGTGCTCATAGCAAAGACCATAAACAAGGGTGAGATATTTGTGTTCCC AAAAGGCTTGGTTCACTACCAGAAGAACAATGGTTACTGGCCTGCTTCTGTGATTTCAGCCTTCAATAGCCAATTGCCTG GCACAGTGTCCATTCCTCTGGCTTTGTTTGCAGCCAAGCCACCGGTTCCAGACAATGTGTTGACCAAGGCTTTTCAGACA AGTACTGAGGAGGTTGAAAAAATCAAGGCTAACCTTGCACCCAAGAAGTAGGTGGTAGTTGTTCTGATGTTCCTGTCATG GGTCTATTTGCCTTTCCCTTTAATATTTGTTGCTTAGTTTTATGTTTGGAACTCATAAAGGAAGAAAGAGTTCTAAAGGG GCATATTCATTTGATGATTGAAATTTGAAAGATCTTTGCTTGCTTATTGCTTTGGTAATAAAAATTTCTATCATGGTTAT GTCCACTGTTTGATTTCTGATAAATAGCTCTTATACGAGCCCTATTCACCTTATTAGTATGTTTAATTTCACTTTTCATC CATAATCTATTATAATTGCGCAATTCGGATCCCCGATTTTCGAAACCAATGATTTTGGTCCCAGATTTCAGTGATGTGAG TAAATTAGATCATTCCATCTGGGTTCTTCCGTCTAATTGCTGACAAATTACGAATACGTATACAGTTATAATTATAATTA ACACCTTATGGATCTGGCCCTGTTAAAATTATATCTATAATTACACAAGCAGGAAACTCACAGCAGGTAAGTAGTTAAAT TAATAGGCTAACAACCAAAATACTAATCCCAGGAACTAATATCGTTTATTGACAACATAGTTGACTTAACTTAATGCAAG GAACATGAGCCAAAAACACAGTCATTTTAGCACAGCTATGGATAATTTTATCTTGTTTTTGAAACCACTATGTTGTCAGC TATATTCCTGAATCCTATATTTTATGTGGCGGCATACAGCAAATAAAATACATTCAGCCATACTGGATGGTGATTTTCTA TGTCAAGATTCCTCATCGCTTTCACTCGTCCAATCATTTGAAAGCTGGTAGCACAGACACAAGTATGGACCCATTTTAAT GATATACTATATTAGAGAGCAGCCATAAAACTGATGTCAGATTACCAACCCATGGGAACCAGATAGCTTAATTTTCTCCA AAGAGCATTCCAACTTGCTAAAAAACTAAATAAAACTTGTCTTTACTAGTCAACAAGAGCACAATAATGCTTTTGTTAGA AAGTACAAACAGAAGATAGTGATTGTAAACATGACAATAATTCCATAAACTTGTGGATATGGAAGATTTCCTAGAATAGG TTAAAAGCAAAAAGATAATCTCAAATATTTGTTGCATTGTCCTCATCATGCAAGATAATGAAAAACAAAATGACGTCTTA TGAGGAGCGATTGAAGGATACATCGCATCTTTTTTCTCACTTTAGATGTCTACACCCATTGATTGTCTACCTAACACATT ATTGTTTAAGCATACTCAGAATTCTTCTTGACGAAAACTATGTCAGCTAAAATATTTATAATTTCAAAAGGATACTCAAT ATTAGGAATGTTTTATTTTTGGGGTTAAGAATCACGCATGAATTTTAAGACTTTTTTGTTTTGAGCTAAACTGACGTTGG GAAATAGGAACTTGTATGATTTAATAGGAGTTCTTATTTGAAAATGATTAACAGCCACACAATGACACAAATGGCAAGGA AAAATATAGAAGCACAAGATTCACAGATATCATATCCATCAATGATGCCGTCATGATCTGAGTCATCCAGAATTTTGCTA CGTTGGTGTTGGCACTGAGTGCCAGTATGCAGAATTTTTTTTTTGAGCAGTTCCAAATTCAGTACCCTCTTGCAACCCTC TCTGTTTCCAAACCAGTCATCGCTTTACTCAGCACAATGCTAAAATAAACAACTTAATGTGACCTCAGCAATCACTTCCC CATGATCATCCTCATGAAGATAAGCAATCAATGTGTCATAACTCATAACCTGTGACTTCAAAAACTTCTTAAATCACTGT ATCATCCATTCTCCCAACAGGCACAGATTGAATCGCTTTTGCTGCAAACTTATAAGATTGCATGGCACCTGCTGCAGTCT TGATCTTCGTGAAACATTGCTCGATGATTGGCTACACCTTTAGGAGCATATTATCACCTGAACTGCACTTGGAATCATGT ATATAAAATGACCAAGTCTTACAAGGCTTAACGGAATCTGTTCTGCTACAGATGCAAGGCTAATGTCACCATCCTATCTC ACTGCAACAGTTCTAGTAGATAGAGAAGGAGAGTTTTCAACAGTTGTTCAAGCTGATTAATTTGTTCAAGCTGATTAAAT TTTGAAAGGGTTCAATACAAACTACAGACTGACAATTTACATTGGAATGAAAATTCTGATTGACAATGAGACCAACCAAT AAGCATAGAAAAGCTTTTAATGGAAGCAGAAGCAGCAAGGACTACAAAGCCATCCACTTGTTCTTCCTACTGGTTTTCTT GTTTTCTGCCTCATCTAGGATGTAACCCATTTTGGAAGAGATAAGAGCACACACATAAGTCCTCTAAACCAAAGTAAACA ACAACACTACACATCAGCAGCTATCTGATTTGAAAGCATGGGCAACAGAATTTACAAACCTATCAAATTCTTTACAAGAC AATAACTTGAACACAGAATAGAAAAAATCTTAAATGACCAAGTCAGACATCATAAAGGGAAGCATGTGGTGTTTTGAAAA TTTTCCAAATTTAAATATAAGTTGTTTTTAAAGAATTTTTAGCTTTGCTAGAGGTCAGAGATACAAGTCTAGCAAAGACA AAGGTGCACCTCCTGTGGTTTTCATCATCAATTTTGGAACTATTAGAAGATCACACCTCTAACAACAGAACAAATCAACT GCTTGACTAGGGGAATATGTGTATCTTGAACTCAGGTTTCATGCACAGACCACCAGATGGTCCAGATCACAAGCACAAAG CGTTTAAAGTTGCAAACCCTACGTATAATTTCTTTAGGGTGTGTTTGTGAGTTGAGTTTTGGAGGGGAGGGAAGGGAAGG GGGAGGCTTATGAGAAGTTCTCCCCTTGATTGGGAGATTTCAAAAAATGGGGGGAGGGTTTGGAGGTATTTCTGAAAACC CACCAAAGACCCCTCCAAAACCTTCTTTTAGTTATTTTTGTTAGTTCCCCCAAATTAAGGGATTCTGAAGTATTAGGAAC TTCCAAACAAGGGAAGGGCGCTTACCCCCCTTCCCCCTCTCTTTCCTCCCCTCCTCTTCCCTTCAGAGTCTTCCCCTCCC CTAAAGACTCCCAAACACACCTTTAGTAAACATGGAAATGGCATGGACTGCTACACAAACTAAAGAAAAGGGTTTCTCCT TGCTCTATAAAAGCTGCCACATGTGTAAATTGAAATTGAAAATGTCATCTGAATCCAGTCACCATTCACTACTTTTCCCT AGTGGACATATGTGTACATTGAACCCATGAATTCAATTGTAGAACTTGAATAAATGACAATCAAATAAGACCTCCCCCCC GGATGAATTAAAAAGTTGCATACATGAGTAAAATGATGAAAAATTCCTATCAACAAGAAAGGTATTACCAAAATAGCAGG GTTCAAAAAATTTCAATTTCAGTATGTACACCACCCACTTCTCAGATTGAGGACAACTAATGTTCCAGAATAGAAAAGAA TCCAGTTTTGATCAACATCTTTCATACCAGTTGATGAAGCAACTCTTTGTTTTCTATAAAATCATTTCATTTTCCAATGC ATATTAACATGTTCTAAATCTATGATCAACAGCATGTTGTTGACAAAGGAACCAAACGCAAAGAATCTCCAACAGTGAAG TCCTACTAATCCAAGTGAGGATTGCATTCTTTGCAATAGAAATCATTATTCTGTATCAAATTTTTCAACATGGCATGAGT GAAATTAGGGTGATTGGGGTCACTAATAGGTGATAAATTAGGGGTTTCCAACACAAGGGGACGCGAGAAACAAAACTTGC ACCCTGTTCCAGTTGGAGCACCATCACCATCAACTCGAGTAGTAATAACCTTCTTACCTGCTGTGGAATTCGATAACGAT TTTGATGATGAAGATGCAAGAAGAGGCTTTCTGCTCTTGATTCTGCGGATTTGGTTCTTGGCTTTTGTGAATGGATGCAG AACCACCTCCTTCCGAAAACCACCACAACCCATTTTTGTGGTGCGGTGGTTCTTCTTCTTATCCTCATCGTCATCGCTAT CACTGCCTCCTCCTTCGTAACCATCACCATTGGAGAACTCATCATCAATGGAAGAAGAACCAGACATCAAATCGAAGCGC GTGCGTGCGTTACAGCGTTCGATTCAAAGGGAATTAGGTTACGGAATTTGAATTTTCAATCATGGAAGTTGAATTTTGTC ACTGTTGAACAAGTTGGCAGAGAGAGAGGGACATGGTAGAATGGAAGTGTAACACACGACAAAATCAAAAGATGTGAAAT AAAAATCCTTCCTTCGTTTTCGTTTGGTATGGCAAAAAAAAGGGGGAAAGGGCCCGCGGTAAAGTTTTCTTCTCAAAACT GGAAGGAAAACAGTGGGAATGCTATAATTTTGCTCTAGTGACAAGTTTACCCTTATATAAATTCTCTCTCATGCAAAACA ATTATATATCTAATAATGTATTTAAAGTTCGACATTAT
CDS sequence (LotjaGi1g1v0752400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTGGTGGTGTTGCTGCTTCTGACATTGACCACCTTCACTGCAGCATCAGATCCTGATTCTCTACAAGATATCTG TGTCGCAGACCTATCCTCCGCAATTAAGGTGAATGGATTCGTCTGCAAAAGCGCTTCCGCAGTAAAAGAAACTGATTTCT TCTCAGCCATACTAGCCAAACCAGGTGCAACAAACACCACCTTCGGCTCTGTGGTGACCGGAGCCAACGTTGAGAAAATC CCAGGACTCAACACTCTTGGCGTGTCGATTTCAAGGATTGATTATGCCCCCGGCGGCCTCAACCCACCTCACACTCACCC ACGTGCCACCGAGGTGGTGTTTGTGCTCGAAGGACAATTAGATGTGGGGTTCATCACCACAGCCAATGTGCTCATAGCAA AGACCATAAACAAGGGTGAGATATTTGTGTTCCCAAAAGGCTTGGTTCACTACCAGAAGAACAATGGTTACTGGCCTGCT TCTGTGATTTCAGCCTTCAATAGCCAATTGCCTGGCACAGTGTCCATTCCTCTGGCTTTGTTTGCAGCCAAGCCACCGGT TCCAGACAATGTGTTGACCAAGGCTTTTCAGACAAGTACTGAGGAGGTTGAAAAAATCAAGGCTAACCTTGCACCCAAGA AGTAG
Protein sequence (LotjaGi1g1v0752400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLVVLLLLTLTTFTAASDPDSLQDICVADLSSAIKVNGFVCKSASAVKETDFFSAILAKPGATNTTFGSVVTGANVEKI PGLNTLGVSISRIDYAPGGLNPPHTHPRATEVVFVLEGQLDVGFITTANVLIAKTINKGEIFVFPKGLVHYQKNNGYWPA SVISAFNSQLPGTVSIPLALFAAKPPVPDNVLTKAFQTSTEEVEKIKANLAPKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| PANTHER | 5 | 213 | 209 | 2.2E-108 | – | |
| PANTHER | 5 | 213 | 209 | 2.2E-108 | – | |
| Phobius | 15 | 18 | 4 | - | – | |
| Gene3D | 18 | 212 | 195 | 2.2E-80 | ||
| Phobius | 19 | 214 | 196 | - | – | |
| SUPERFAMILY | 19 | 210 | 192 | 6.64E-43 | ||
| SMART | 55 | 204 | 150 | 2.4E-32 | ||
| Pfam | 58 | 203 | 146 | 3.7E-46 | ||
| ProSitePatterns | 99 | 112 | 14 | - | ||
| PRINTS | 104 | 124 | 21 | 2.5E-26 | ||
| PRINTS | 134 | 154 | 21 | 2.5E-26 | ||
| PRINTS | 167 | 182 | 16 | 2.5E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Manganese ion binding | Interacting selectively and non-covalently with manganese (Mn) ions. | ||
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi1g1v0752400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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