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LotjaGi1g1v0756100.3

Overview

Field Value
Gene ID LotjaGi1g1v0756100
Transcript ID LotjaGi1g1v0756100.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT5G26751.1 shaggy-related kinase 11; Swiss-Prot: sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3; TrEMBL-Plants: tr|G7KTQ8|G7KTQ8_MEDTR Glycogen synthase kinase; Found in the gene: LotjaGi1g1v0756100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:132954238..132957479) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCATCAGGGGTTGTGCCACCTGCTTCTGGATTCACAGATATGAACACAAGTTCAGTTGTTGGGGTTGAAAGGTTGCC CCATGAATTGAATGTCATGAAAATCAGGGATGACAAGGTCAACAACTTTTACCCCACTTTGCTTTTTCTTTCTTTGTTTC TTTTCATTCTATTGAATGTATATGAAGTCTATTTATTTATGTTAATACTTGCTGAACATAATGCAGGAAATGGAAGCCAC TGTGGTAGATGGAACTGGAACAGAAACTGGACATATAATTGTCACTACCATTGGTGGTAAAAATGGCCAGCCTAAACAGG TTTGTGTCTCATTTCTGGTTTCTGGTTTCTGGTTTCTTGTTAGTTGCTACTGATAGTTGGACACCTATATAGTCTATGAA CTTTATATATGTTTGATGTTTCAATTTTAGACAATAAGCTACATGGCTGAGCGTGTTGTTGGAAATGGGTCCTTTGGGGT AGTTTTCCAGGTTAGTCCTTTTGTAATGCTCCTTTTAGCCAACTTTAAATGCATGTTTGGAAACTCTCTTGCCATTGATT ATGAAATGGAAGGTTTCAGAATTGATTTTGATGTAAGAGAATCGGATCTGAACATGCTATAAATTGGTTTTTGGTTAGTT TTGAAGTTTTGCTGTATGCTCATGGTTATTTGTTGTTATTTTTCAATTGTGCAGGCAAAGTGCTTGGAGACTGGTGAAAC TGTGGCAATTAAGAAGGTTCTTCAAGATAAGAGATACAAGAACCGTGAATTGCAAACCATGCGCCTTCTGGACCACCCTA ATGTTGTATCTTTGAAGCATTGTTTCTTTTCTACAACTGAAAAGGATGAACTATATCTCAATCTTGTGCTTGAATACGTT CCTGAGACTGTCAATCGGGTCATCAGACACTACAACAAAATGAATCAAAGAATGCCATTGATATATGTCAAACTTTATTC TTACCAGGTATATCTATGCACTGTATTTCTTCCTTAAAGTTTTCTTCTTCTTGTAAGCTTTAAATAGATGTATCTCTTTG TTGGTTCTCATTATCCCTTCTCGTTCTTAATTGCAGATTTTGAGAGCACTTGCTTATATTCACAACAGCATTGGAGTGTG TCACAGGGATATAAAACCTCAAAATTTACTGGTATATATTCACACAGTACCTTTTATCATTTGGTTATCGTATTTGTGTG TCACCAGCTGAATTGAACTTGAATATCGATATAATGTCTGTGCTGTTTTATTTGGATACAATTTGTGCTGTTAAGTCTGT TTTTTATTTTTTGAAAATTTATGAACCTGCAAAACCTTCAGAAGATGTTTCAAATGAATATTTGAAAGTTTAAGTTTGAG CATTTATAAATTGTTGCCTTACATTCCCTTTACGATGGAGAAAGAGTGATTTTTGGTTCTATCTTCTGGATGTTGTCATA ACAGGTCAATCCTCACACCCACCAGTTGAAGATATGTGACTTTGGAAGTGCTAAAGTCTTGGTTCGTTTATTCTTAACCT GAAAATCCCATTGTCCGTTTTCAATGACTGTCTAATGTTTTATATGACCATATGCTGCTCATGTTTTACAGGTTAAAGGT GAGCCGAACATATCTTACATCTGCTCTAGGTACTATAGAGCTCCTGAGCTTATATTTGGTGCAACGGAGTACACCACAGC CATTGACATCTGGTCAGCTGGTTGTGTACTTGGTGAACTGTTGCTTGGCCAGGTAGATATCTAGCTTTCTCAAGTATGTA TTCTAGTACATCTAAAATTCACAGATGTATAGAAACTAATAATCAATTTTTGTTTCTGCCAGCCGCTTTTTCCTGGTGAG AGTGGAGTAGACCAGCTTGTGGAAATTATCAAGGTATGATATGTTTTAGATTAATACAAGTTTAGACTGTAAGATTCAGG CATTCTGATAAGTGCTGGTTTTCTCTGGATGGTCCCTCTTAGAATTATAGGGCCTAACCCGAATTATAAGATGTATCAGA ACATATTCTAGATCCGTTTGTTGGACCATGCAAAAATAGGCCACCCACAAATGTCCAATCCTGTAAGATTCATGCTCTAG ATGTCCATCCTTGAACGTGAGTGGTGTATTAGGGATCCACACATCGACTACAGATATGACCAAATTAGACATGACATAGG GTTGAGTAATTCTCATCTGTCACCCCTGAGCTAACTTTTTGGGACAGAGCTAAGCCTAACTGGAACTTTTAGAGTCTGAA CTTTGAAGTTTGAACAAGCACCCTGTGCAGGCATAAGTGACTATGTGACCTTGTAACTAGCTTAAGTATATCATTACAAA GTGTCCTTGTTTCTTCTTTCTGTCTTGTTGAATGGTACATTTAGTTACATTACCTCTGAAGATTATTGGGATTGGCTTGC AGGTTTTAGGTACCCCAACAAGGGAAGAAATCAAGTGTATGAATCCTAATTACACAGAGTTTAAGTTTCCTCAAATTAAA GCTCATCCATGGCATAAGGTATAGTAATATTTCTTTTTTGTCTTTTTAGTTCCTAACTTCTTATACCATATTATATTTAT CTGTTTATGGTTCTTTATCAGATCTTTCACAAGCGAATGCCACCTGAGGCTGTGGATCTTGTCTCAAGACTTTTGCAATA CTCTCCAAATCTTCGAAGCACAGCTGTGAGTACATAATTTCATACAATATAGATTTTACCTTTTAGACAGTTTTGTGCCT GAGCATTATATGGCTGCATTTGCATTACACTATTACTACATAATGCATGTAGTTCCTTATAATTATGTTGTGTTTGATTT TCAAAATTCTACCATGTAGCTTTGGCATATGACATGCCATATATGTCACTAATGCAAATGTAGTTGGCCGAAACTTTCTA CTTCACAGCCGAATATGTGGTTAAATATCCATAATTGTTTCCAATTGAACGTTATCTTAAACTACGTTGTTTGTGCCATG TAGTTGGAGGCTCTGGTTCATCCATTCTACGATGAGCTGCGTGAGGCAAATACCCGGTTGCCAAATGGCCGTTTCCTTCC TCCACTATTTAACTTCAAAGCCAATGGTAAAGAACCAATTTCCAGATAACGATTGTGTTATTACTTGTTGTAATCTCTCA AAGTTCTCAGTTAATGATGTTTCTGAAAATCTGATGCAGAGCTTAAAGGAGTAGCAGCTGAGATGCTTGTGAAGCTGATT CCACCTCATGCAAGAAAGCAGTGTGCCTTGTTTGGGTCATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0756100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATCAGGGGTTGTGCCACCTGCTTCTGGAGAAATGGAAGCCACTGTGGTAGATGGAACTGGAACAGAAACTGGACA TATAATTGTCACTACCATTGGTGGTAAAAATGGCCAGCCTAAACAGACAATAAGCTACATGGCTGAGCGTGTTGTTGGAA ATGGGTCCTTTGGGGTAGTTTTCCAGGCAAAGTGCTTGGAGACTGGTGAAACTGTGGCAATTAAGAAGGTTCTTCAAGAT AAGAGATACAAGAACCGTGAATTGCAAACCATGCGCCTTCTGGACCACCCTAATGTTGTATCTTTGAAGCATTGTTTCTT TTCTACAACTGAAAAGGATGAACTATATCTCAATCTTGTGCTTGAATACGTTCCTGAGACTGTCAATCGGGTCATCAGAC ACTACAACAAAATGAATCAAAGAATGCCATTGATATATGTCAAACTTTATTCTTACCAGATTTTGAGAGCACTTGCTTAT ATTCACAACAGCATTGGAGTGTGTCACAGGGATATAAAACCTCAAAATTTACTGGTCAATCCTCACACCCACCAGTTGAA GATATGTGACTTTGGAAGTGCTAAAGTCTTGGTTAAAGGTGAGCCGAACATATCTTACATCTGCTCTAGGTACTATAGAG CTCCTGAGCTTATATTTGGTGCAACGGAGTACACCACAGCCATTGACATCTGGTCAGCTGGTTGTGTACTTGGTGAACTG TTGCTTGGCCAGCCGCTTTTTCCTGGTGAGAGTGGAGTAGACCAGCTTGTGGAAATTATCAAGGTTTTAGGTACCCCAAC AAGGGAAGAAATCAAGTGTATGAATCCTAATTACACAGAGTTTAAGTTTCCTCAAATTAAAGCTCATCCATGGCATAAGA TCTTTCACAAGCGAATGCCACCTGAGGCTGTGGATCTTGTCTCAAGACTTTTGCAATACTCTCCAAATCTTCGAAGCACA GCTTTGGAGGCTCTGGTTCATCCATTCTACGATGAGCTGCGTGAGGCAAATACCCGGTTGCCAAATGGCCGTTTCCTTCC TCCACTATTTAACTTCAAAGCCAATGAGCTTAAAGGAGTAGCAGCTGAGATGCTTGTGAAGCTGATTCCACCTCATGCAA GAAAGCAGTGTGCCTTGTTTGGGTCATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0756100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASGVVPPASGEMEATVVDGTGTETGHIIVTTIGGKNGQPKQTISYMAERVVGNGSFGVVFQAKCLETGETVAIKKVLQD KRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVNRVIRHYNKMNQRMPLIYVKLYSYQILRALAY IHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGEL LLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRST ALEALVHPFYDELREANTRLPNGRFLPPLFNFKANELKGVAAEMLVKLIPPHARKQCALFGS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24057:SF45
12 380 369 1.2E-251 –
PANTHER
PTHR24057
12 380 369 1.2E-251 –
Gene3D
G3DSA:3.30.200.20
30 125 96 2.0E-35 –
CDD
cd14137
41 333 293 0.0
IPR039192
SUPERFAMILY
SSF56112
45 354 310 9.58E-88
IPR011009
SMART
SM00220
46 330 285 7.9E-88
IPR000719
ProSiteProfiles
PS50011
46 330 285 44.584
IPR000719
Pfam
PF00069
46 329 284 6.1E-64
IPR000719
ProSitePatterns
PS00107
52 76 25 -
IPR017441
Gene3D
G3DSA:1.10.510.10
126 374 249 2.8E-79 –
ProSitePatterns
PS00108
167 179 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0756100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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