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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0760700 |
| Transcript ID | LotjaGi1g1v0760700.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133377899..133384681) extracted from Lotus japonicus Gifu genome v1.2.
CCCTACCCACCAACTTTATGAAAATCTCACCAGCTAGGCCAAGTTGCTTCATTGCCATGATAAAGCAGTTAAATGGAAAA TCCAATCATGACAGTAGTAGTAAGTAGATAACTCACTCTATACATCCTCATCATCATTGTACCCTGCACAGTATCATTTA TACATCACCTCACAGATTATTATTCTATATATATTACGTTCCCCCCATACTTTTCTGCAAGCCCCTTCATTTATTTTTCT CTTTTCCCCCTCAAATGGCCTCCACTTCCTCACCACCCTTCATTACTATCATTACTATCTTCTTCTTCCTCCTCCTACTA TTAGGAGTTTTCCGGCACACCGGAGAAGCCCGTGACCCGTTCGCTTGTGACCCGAAAGATGGCACCACAAAGAGCTTGCC ATTTTGCAATGTGTCACTGCCGATACAGGAGAGGGTGAAGGACCTCATTGGAAGGTTGACGCTGCAAGAAAAGGTTAACC TACTCGTGAACACCGCCGGTGCGGTTCCCCGGCTCGGGATCAAAGGCTATGAGTGGTGGTCGGAGGCGCTTCATGGAGTC TCAAATGTGGGCCCCGGAACCAAGTTTGGTGGTCAGTTCCCTGGTGCTACTAGCTTCCCACAAGTCATCACCACCGCTGC TTCCTTCAATGATTCTTTGTGGGAGGCCATTGGACGGGTCAGATTTTCTTTTCCCTACATCTAAATCAAGCAGTCTATAA TTAGAGTTTGATCCGTATACATCATTTTTGTGACAGACATCCGACATTTGCAGTTGAGGAAACCGTCACAAATTACAAAT GTTGAGTGTCAATCACAAAATTGGTGTACACGAATCATTTATTAGACAAACTAAACAAATAAAATGCGTTAACTTTTATG TACATTTATATAGATAAGATGAACATATAAAATGCTTTACATGGAGGACAATGTCTTCGGTGGGTTGGTTCAAAAATGAA TCACGGTGATACAGTTACTATTCCCCACTTAAGTTACGAAAATATCCATTTTGTCTTTTCACTTCCCTTCTTTCTCCTTT ACTCTCAGCCTCTCCTAGCTAGTATCCAGCGACACGCGCCGCCGCCGCCTCCAACCCCTGCTCCAGCCTTCCACAGTCTC CTCCTATCTATCATCCTTCATTCCTTCTATGGATCCTCTCCCCCACCTAGCCATTTCACCATTTGTAGCATGTAGATTTT GCACATAGTTGAAGAACCCTCCAAAGTTGAAGCTTCCACGAAATGTCTTTTGAGAAAAGCTGGCATCCGCAAAAAGAAAG TTGAAAACCACACGGGCATGATTCTAAAACTCTGATAAAAAAAAGCACTCAACAACCAAATGCTTAATATCTTAAGAAGG ATAACTAGACATTGTTCCTGTTCTGAATCAATTTTCCAAACATGGTCAACCCAAAACAATGAATCACATCAATTATACAA CAAACAAAATCATAATTCCCAGAAACAAGACACGAGCTTGCTTTCCAGAAAAAAAAAAAAACAAGAGCTTAATTCCTTTT TGTTTAATTCTAATTCTCTTTCAATTGAGTAGAGAGAGAAAAACTACACAATGTGCATAAAAATGAAGCCTTTATCATCA AAATGTAAAAGAAAATAGTGAATTTTCAGAGTTTGCTGAAAATAGCCAGAATTGAGGCACGCAGAGAGAGAAGCATGGAG AAAAATTGAAACTTTATGCAAAGAAAGAGGGGGATTGCTTGCACAGTTATAGAGAAAAAAGAAAAGGAGAAAAGGAGGAG GAAGGAGGGCTGCGGTGGCAGCACCATGGACCAAACAGTGGTTAAGGACAGTGGTTCGGCGGAGGGTGAGAGTTGCACGG TGGTGATTCAGTATGGTGGGAAGGAGCTGCGGGTTGGGGATTTAACGAGAGGGAACAATGGTTGTTGGTGGCTTCGCCAT TGAGCTTGAACGACGGTGGTGCTGGGCAAGGAAAATGAAAGATAGAGAAGAACATTCTGGAGAAGAAAAGAGGGTAAAAT TGGAAATAAGCTATTAAAGTTAGTTGAATCTGAACCGTTAATTTTTTAATTAATATATCAAAGGTGTTTATTGAGCTGAA CTACGGTGATTCAGTTTTTAACTGTCACACCGAAGCCAACACCTACATGGAGTGATTTAAATATATGTCCACAGTAGTAA AGTGCATGACTTTTGCTTTGGGGTGGTGGTCTTTTTGTCAATTTCTATTGTTTCCTTTTTGTTTTTGCTGAGATTCTGTC AAGTTGGGTTACCATCGCAGTACTTTAATTCTGCATTGTGACCAATAATATAGACCTGCCACACAAAAGTTTCCACAGTG CCCAATTTAAAGTATGGATGTAATAAATATTTACCATATAGCAATAATAGTTTAGGCGTGACACGAATGTGCACACACTT GTGCTAGCACTTATGGATCACCTTACATTGTTCAACTTGCACATCATGTCTAAAGAGTTCTTATTCGTGTACATAGTTAA TTTTTGTGGCAGACATTCGATACCTGTAAACTACAAAAATGTATAAGTTCGTGAAATAAGAGATTGCATAAGAGAGATTT AACGTATACATATGGGCCTTATACTATGTGCAGGTTGTCTCGGACGAAGCAAGGGCAATGTACAATGGAGGAGCAGCAGG GCTAACGTATTGGAGCCCAAACGTGAACATTTTCAGAGACCCTAGATGGGGCCGTGGACAGGAAACTCCTGGTGAGGACC CTGTGCTAGCTGGTAGATACGCTGCTAGTTACGTGAGGGGGCTACAGGGAACTGATGGTGACCGGTTGAAGGTGGCTGCT TGCTGCAAACACTTTACAGCTTATGATCTTGATAATTGGAACGGTGTGGATCGCTTCCACTTTAATGCACAGGTGCGTCT TATTAAAACAAGTCTATTTTGAAATTTGAATGCATATTTTTTACTTTATTAATTCTATAGTAACATCTTAATTATGTATA TGTATATGGTGCCAAGCATGACGGAAATTAATAATATTGAAAGAACAGTGTGCGGCGCCTTTGTACATTAAGTTAATGCA CGTGACTGTGATTAGGTTTGTGATCGGTGATTTATTATTGAACATTGAAATTGAAATTTAATACTACTATTAATAATGTT AATTGTGCAATTCAATCCCAAATTGAAACTTCTGAAGTCCTGCACTCTTTTGTTACATTTTTTCAAACAAACAATTATCC TAAAAGCCGTAGCGATTAGATAATGATACATAAATGCTAATATTTCTAGCATGCTTTGTCACAGAAGAGTTCAGGCTTGA AGCGTGAATATTGTACAGGCTCATAAATCATATTCTAGAATTCAACTTTTAATTAGAAGAATTGAAAGTGATAAATACCG AGCTCTAAATTACTTTGAAATATGATTATATTTCTTATAGTACCAAATAATTCCTACACTGTGGGCCCTCTATGTGTGTG TCTTCGGATACTATTATGGATAAGAGACAACTATGACTCGGATGATTGGACGTGAGATAATGTTTGTTTAGTCGTTTTCT TGCTTTGCTTAGAGCTTAATCAACTTATAAACATAGTTAAAATAGAATAATATATACTTAAATATCTTAAGGCGTCATAT GTCTAATAATTATCTACTTATAAGGTAAGTGCTTTATCATGCGTAACATAACATAATGGGAGAAATATGGATGGTTAATA ACACAAGCTTCTCAGTTTGACAAGTCAGTTATAGATAGCTCTTCAATTAAAGTGAACTTGCTTAGTTACTTTGAGCTGTT GTTGCACTTTACCATCATGTTGTCGGAGTAATGTTACACTATATACATTATTCTTGAGTAAATTGAACCTTACTTTAAGA TTAATTGCAGGTGAGTAAGCAGGACAAAGAGGAAACATTTGATGTTCCATTCAGGATGTGTGTGAAAGAAGGCAAAGTAG CAAGTGTGATGTGTTCTTACAATCAAGTCAATGGGGTCCCAACCTGTGCAGACCCCAACCTCCTAAAGAGAACAGTTCGT GGACAATGGCATCTTGATGGGTAGGGTAACCTTTCAAATAATAGAATACCAAATTAATACTCATTGGATGCTCACCTTCT GTTTGAAGAAATGATCCACTCTGAAAAAAATCCTAATCTTTTGCTATTCTGTGGTTTAGGTACATTGTTTCAGACTGTGA CTCAGTGGGAGTGTTTTATAGTAACCAACATTACACATCAACACCAGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGCT AGTTACTGAAATCAGAACCAATTTAATGGATTCATTTCTTCACCATTAAAAGAGAAATTGAAGTCCAATTTTTTGTTGTT TGGGGTGTAAAGGCTGCACAGTTGACACACAGAATGAGATTTTTGTTTTTATCATGTTACAGGTTTAGATTTAGATTGTG GTCCTTTCCTAGGATTGCACACGCAGGACGCGGTGAAAAAAGGTTTGTTAAGCGAAGCAGATGTGAGTGGTGCTTTGATG AACACACTCACAGTGCAGATGAGGTTAGGTATGTTTGATGGAGAGCCATCAGCTCAGAATTATGGCCACTTAGGTCCAAG AGACGTGTGTAAACCGGCTCATCAAGAACTTGCCCTTGAAGCTGCAAGACAAGGGATTGTGCTCCTTAAGAACAATGGTC CCTCTTTGCCTCTCTCCCCGCAGCGTCACCGCACCGTGGCTGTCATAGGCCCCAATTCCGATGCCACATTCATGATGATT GGAAACTATGCAGGTTAAACTCCTGTTCTTCTTCTTCAAGATTATACATTTATTTTTGTAACATATTCTAATACCATCAC ATTAAGCGCATTCTTGGAAATTCTTCTAGGATTGATCTGTGTGAATAGCTTCTGATAGTTAGAATTGATTTTGAGAAAAT AGAAGCTAATCCAAAAAAAAAAGATTCAGGACTAATGGTCTCTTTACATGCCTTACAGGTATTGCTTGTGGATATACCAG CCCTTTACAAGGAATAGGAAGATATGCCAAGACTATTCATCAAAAGGGCTGTGATCATGCAACTTGTGCTGATGACAAGC AATTTGGGCCAGCTCTAGATGCAGCTCGTCATGCAGATGCAACTGTTCTTGTGATGGGGTTGGACCAGTCTATTGAAGCT GAAACAAGGGATAGGGTTGGGTTGCTTTTGCCAGGGCATCAACAAGACCTTGTTTCAAAGGTAGCAGCTGCCTCAAGGGG ACCAACTATTTTGGTCTTGATGTCTGGTGGACCTTTAGACATTACTTTTGCAAAGAATGACCCTAGAATTGCAGGCATCT TGTGGGCTGGCTATCCCGGCCAAGCCGGTGGTGCTGCCATTGCAGATATCCTGTTTGGAACCGCTAACCCAGGTTTGTGT CTTTGTCATCAAATCTACCTCTATTAATGCAGCTTCAGTTTCATCAAAATCAATTATGAAATCCAATGGTATTCGGAGAA GCTTCTCCTTAGAATTGATTCTACATTATGAATCAATCGTATAAAGATTTCCAAATACGCACTTAATATGTTTGGTTTCA CGATAAAATACTTTAGAATCACTTCTGGTGAAGTCTTAATGAAAAAACTTGACTTAAATTCTATGCAAATCATGAAACTA AACATGGTAAGTGACATACAGTCATACATTGTCTACCTCACACACAATTTGTGGTGAGAGTTATCACATCTTACACTTAT CCTAACCAAACATGCTATATGTGATTCTTATACTAAGCAATTTTCATTCACTATGCAGGAGGTAAGCTACCTGTGACATG GTACCCACAAGAGTACCTAAAAAACCTGCCAATGACAAATATGGCAATGAGACCAAGCAGAACAGCAGGGTACCCAGGAA GAACATATAGATTCTACAATGGCCCAGTGGTGTTTCCATTTGGACATGGACTGACTTACACTCACATTGTCCACACCTTA GCTAGCGCGCTCACGGTGGTGTCAGTTCCGGTGGACGGTCACCGCCATGCCAACAGCACCAACATTTCAAACAAGGCAAT TAGAGTGACACACGCGCGGTGTGGCAAGCTCTCCATCGCACTCCACGTCAACGTTAAGAATGTGGGATCTAGAGACGGCA CTCACACATTGCTAGTGTTCTCTGCTCCACCCGATGGTGGTGCTCATTGGGCAGTGCAGAAGCAGCTTGTGGCGTTTGAG AAGGTTCATGTCCCTGCAAAGTCACAGCAGCGAGTCCAAATCAACATTCATGTTTGCAAGCTCCTCAGTGTAGTGGACAG GTCAGGGATAAGGAGAATACCGATGGGGGAACACAGTCTTCATATTGGTGATGTTAAACATTCTGTTTCACTTCAAGCTG ATGCAATTGGAATTATCAAGTCCTGACCAGGAATGTCTAAGTTCCTTTTCACTTGATAATTTGAAAATTTAAATTCAAAC TACGTTGGTTCAAAGGAACCATCTATTCAAAGCGCAATTTGTTGATATATATGGATTGGAGTCTCAAGACATGTTAGATT GAGTGATCTTATTAAAGATGTTTAATAACAGAATACTAGGATTTGTTGCAATTTCAGAGAGGAGATTAAGGAAATGTATT ATTATTCGAGTGAATCACCATTTTGGTCCCTAAGAAAGTAGTCACCGGTCATATTAGTCCCTAGAGATCATTAATGGTTA AAAAAATCCCTGTAAGTGTTGACGTCGGTCATAATAGTCCCTATCTAAGTTTGACCGTTAGTCCCTGGAACGGAAAGTGC CCATGTGTCACGTTATGTGCCACGTAGGTTTCAATTTAGTCCCCGACGTTATCAATTTAGTCC
CDS sequence (LotjaGi1g1v0760700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTCCACTTCCTCACCACCCTTCATTACTATCATTACTATCTTCTTCTTCCTCCTCCTACTATTAGGAGTTTTCCG GCACACCGGAGAAGCCCGTGACCCGTTCGCTTGTGACCCGAAAGATGGCACCACAAAGAGCTTGCCATTTTGCAATGTGT CACTGCCGATACAGGAGAGGGTGAAGGACCTCATTGGAAGGTTGACGCTGCAAGAAAAGGTTAACCTACTCGTGAACACC GCCGGTGCGGTTCCCCGGCTCGGGATCAAAGGCTATGAGTGGTGGTCGGAGGCGCTTCATGGAGTCTCAAATGTGGGCCC CGGAACCAAGTTTGGTGGTCAGTTCCCTGGTGCTACTAGCTTCCCACAAGTCATCACCACCGCTGCTTCCTTCAATGATT CTTTGTGGGAGGCCATTGGACGGGTTGTCTCGGACGAAGCAAGGGCAATGTACAATGGAGGAGCAGCAGGGCTAACGTAT TGGAGCCCAAACGTGAACATTTTCAGAGACCCTAGATGGGGCCGTGGACAGGAAACTCCTGGTGAGGACCCTGTGCTAGC TGGTAGATACGCTGCTAGTTACGTGAGGGGGCTACAGGGAACTGATGGTGACCGGTTGAAGGTGGCTGCTTGCTGCAAAC ACTTTACAGCTTATGATCTTGATAATTGGAACGGTGTGGATCGCTTCCACTTTAATGCACAGGTGAGTAAGCAGGACAAA GAGGAAACATTTGATGTTCCATTCAGGATGTGTGTGAAAGAAGGCAAAGTAGCAAGTGTGATGTGTTCTTACAATCAAGT CAATGGGGTCCCAACCTGTGCAGACCCCAACCTCCTAAAGAGAACAGTTCGTGGACAATGGCATCTTGATGGGTACATTG TTTCAGACTGTGACTCAGTGGGAGTGTTTTATAGTAACCAACATTACACATCAACACCAGAAGAAGCTGCTGCTGATGCC ATTAAAGCAGGTTTAGATTTAGATTGTGGTCCTTTCCTAGGATTGCACACGCAGGACGCGGTGAAAAAAGGTTTGTTAAG CGAAGCAGATGTGAGTGGTGCTTTGATGAACACACTCACAGTGCAGATGAGGTTAGGTATGTTTGATGGAGAGCCATCAG CTCAGAATTATGGCCACTTAGGTCCAAGAGACGTGTGTAAACCGGCTCATCAAGAACTTGCCCTTGAAGCTGCAAGACAA GGGATTGTGCTCCTTAAGAACAATGGTCCCTCTTTGCCTCTCTCCCCGCAGCGTCACCGCACCGTGGCTGTCATAGGCCC CAATTCCGATGCCACATTCATGATGATTGGAAACTATGCAGGTATTGCTTGTGGATATACCAGCCCTTTACAAGGAATAG GAAGATATGCCAAGACTATTCATCAAAAGGGCTGTGATCATGCAACTTGTGCTGATGACAAGCAATTTGGGCCAGCTCTA GATGCAGCTCGTCATGCAGATGCAACTGTTCTTGTGATGGGGTTGGACCAGTCTATTGAAGCTGAAACAAGGGATAGGGT TGGGTTGCTTTTGCCAGGGCATCAACAAGACCTTGTTTCAAAGGTAGCAGCTGCCTCAAGGGGACCAACTATTTTGGTCT TGATGTCTGGTGGACCTTTAGACATTACTTTTGCAAAGAATGACCCTAGAATTGCAGGCATCTTGTGGGCTGGCTATCCC GGCCAAGCCGGTGGTGCTGCCATTGCAGATATCCTGTTTGGAACCGCTAACCCAGGAGGTAAGCTACCTGTGACATGGTA CCCACAAGAGTACCTAAAAAACCTGCCAATGACAAATATGGCAATGAGACCAAGCAGAACAGCAGGGTACCCAGGAAGAA CATATAGATTCTACAATGGCCCAGTGGTGTTTCCATTTGGACATGGACTGACTTACACTCACATTGTCCACACCTTAGCT AGCGCGCTCACGGTGGTGTCAGTTCCGGTGGACGGTCACCGCCATGCCAACAGCACCAACATTTCAAACAAGGCAATTAG AGTGACACACGCGCGGTGTGGCAAGCTCTCCATCGCACTCCACGTCAACGTTAAGAATGTGGGATCTAGAGACGGCACTC ACACATTGCTAGTGTTCTCTGCTCCACCCGATGGTGGTGCTCATTGGGCAGTGCAGAAGCAGCTTGTGGCGTTTGAGAAG GTTCATGTCCCTGCAAAGTCACAGCAGCGAGTCCAAATCAACATTCATGTTTGCAAGCTCCTCAGTGTAGTGGACAGGTC AGGGATAAGGAGAATACCGATGGGGGAACACAGTCTTCATATTGGTGATGTTAAACATTCTGTTTCACTTCAAGCTGATG CAATTGGAATTATCAAGTCCTGA
Protein sequence (LotjaGi1g1v0760700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTSSPPFITIITIFFFLLLLLGVFRHTGEARDPFACDPKDGTTKSLPFCNVSLPIQERVKDLIGRLTLQEKVNLLVNT AGAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGQFPGATSFPQVITTAASFNDSLWEAIGRVVSDEARAMYNGGAAGLTY WSPNVNIFRDPRWGRGQETPGEDPVLAGRYAASYVRGLQGTDGDRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDK EETFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKRTVRGQWHLDGYIVSDCDSVGVFYSNQHYTSTPEEAAADA IKAGLDLDCGPFLGLHTQDAVKKGLLSEADVSGALMNTLTVQMRLGMFDGEPSAQNYGHLGPRDVCKPAHQELALEAARQ GIVLLKNNGPSLPLSPQRHRTVAVIGPNSDATFMMIGNYAGIACGYTSPLQGIGRYAKTIHQKGCDHATCADDKQFGPAL DAARHADATVLVMGLDQSIEAETRDRVGLLLPGHQQDLVSKVAAASRGPTILVLMSGGPLDITFAKNDPRIAGILWAGYP GQAGGAAIADILFGTANPGGKLPVTWYPQEYLKNLPMTNMAMRPSRTAGYPGRTYRFYNGPVVFPFGHGLTYTHIVHTLA SALTVVSVPVDGHRHANSTNISNKAIRVTHARCGKLSIALHVNVKNVGSRDGTHTLLVFSAPPDGGAHWAVQKQLVAFEK VHVPAKSQQRVQINIHVCKLLSVVDRSGIRRIPMGEHSLHIGDVKHSVSLQADAIGIIKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| PANTHER | 19 | 780 | 762 | 0.0 | – | |
| PANTHER | 19 | 780 | 762 | 0.0 | – | |
| Phobius | 24 | 27 | 4 | - | – | |
| Phobius | 28 | 780 | 753 | - | – | |
| SUPERFAMILY | 48 | 401 | 354 | 2.11E-92 | ||
| Gene3D | 55 | 379 | 325 | 4.6E-89 | ||
| Pfam | 116 | 358 | 243 | 7.3E-38 | ||
| PRINTS | 121 | 140 | 20 | 1.2E-5 | ||
| PRINTS | 208 | 224 | 17 | 1.2E-5 | ||
| PRINTS | 282 | 300 | 19 | 1.2E-5 | ||
| Gene3D | 387 | 633 | 247 | 5.5E-65 | ||
| Pfam | 402 | 632 | 231 | 1.5E-52 | ||
| SUPERFAMILY | 402 | 634 | 233 | 1.57E-49 | ||
| Gene3D | 660 | 773 | 114 | 6.5E-11 | ||
| SMART | 694 | 765 | 72 | 6.7E-9 | ||
| Pfam | 696 | 763 | 68 | 1.2E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0760700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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