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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0784100 |
| Transcript ID | LotjaGi1g1v0784100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb-like transcription factor family protein; TAIR: AT5G29000.2 Homeodomain-like superfamily protein; Swiss-Prot: sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1; TrEMBL-Plants: tr|I1JRR7|I1JRR7_SOYBN PHR2; Found in the gene: LotjaGi1g1v0784100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135696290..135701595) extracted from Lotus japonicus Gifu genome v1.2.
AAAGGTTCGGTTCTTAAACGGTTCGATTTTCGGTTCGGTTCTTGGTTAGCTTCGGTTCTCAGAGAACCATAAACAGTCCT ACTGACGGCCCACAACAAACAAAACCCGCACGTGTGAGCCGTAGGATACAAATACAATGTTCTCTTCACTTGTCCAATGA CAAGAGAGAGAGAAGAGAAAGGTTATCTTAAATCCTAACCTAATCATGATATCATGAGAAACAGAGAATCAATCAACGAA CACAAGAGTCTGGGACTCTGCGAGGGAGTGACCGAGTTTTGGTTTCCGAGATTGTTTGTTTGAGTTAAACACGACAAAAC CCAATTACGTGTGCATTTTAGTCATTACAACTCCTTCTCCTTCTTCTCTTCCTCTGTTCTTATACCCTTCCCTTTTTCCC TGGATTTGCAGCTTTTTCAGATTCTGTTTACTGGTTTTTCATTATTCCGAAGCAATCATCGTTTTACAGGTGAGAGCTCT GTTGCTCCATGATAATCATGCACCAACTTTCTTCATTTTTTATGATTTTGTTTTGCTTGGTTGTACTTTCAGATAAGATT ATTAATTTGAGCTTTCATCTATCAACTTCTATGTTTCATGTTGAATTTTGTAAAGTCCATGGTTGAAAATTTCTCTAAAT CTGGGACTGTGTTTTTGATCTGTAATTGGGTGGGTAGCCTGAATAAACGATTATGACTTCCTTTACTTTAATTTGTGGTT GCAAATTTTCAATTGGATGGCACCCCACCAACCCTCCCCTGGAGTTATTGGTCTTTGAGGGACTTGGTTTTCTGTATCAA TTGCAACTCATCATTGCCACCTATATAATTTCTGTAAAAATTTTCAACTATATCTGTGAAAATTTGATGTACATGGGTGT TGGATAACTTGTTGCATTACTTCCTTTCTATCTGTTTTTTTCTTGTCTCCTCAGATGAACAACAAGCTAATATTGTTGAC TATTGAGAATTGAGATATTAAAAAAATAGCATTCTGAATTGCTGTATAAAAGCATGTTTGGATCTAAGCGCATGTTTGGA TACACGTGGAAAACCACAGTGAAGTTAAAATCATGGTGGACATCCCCAAAAGCTAAGGGAAGCTGTTTCTGTCGACCGTG ATTTTGGCTCACCCTGGTTTTACGTTGTGTATCACTAACTTATTTTTCCTCAGAGTCAATTTTGAAACCCTGAAACTACT CACATAAGCTTCTCCTGAGAATTGATTTTGTCTTTAGAATCAATTTGTGTAAAAAAATTCAAACAAGCACTCATTTGTCC ACTTATTTTGGTGGTGAAGATAATTTGTTATTGCTTTACATTAGCTGACTTGCAAACTTGCTTTTATATATTGAAATCAG GACTGGCAAACTGATTCACTTGGGAGCCTGAAGATATATGTCATCTTTGCCTGCTCTTCACTCTCCCCTTGAGAACAAGT ATATGAAGCCACCCGATTCTTTCCTTGCAAGAGATCTGGCTGCAAATCCTGCCTCAAAACAAGCTACATCATCGAATATG ACCAGAAGTGGTGAACAGATGTTTTCATCCCCTGCTGAATGTCCTGGTGATATCCGCTTTCATGCTGTTTCACAGCATGA CAGGCAATATCGAGATTCTCCATTCATTTCTCCAACATTAGGTGGCAATGTGACCTCCGAAATACATTCAACGGCATTGA TTTCTCACCCTCAAGAAAACGATATTTCCTGGGGACCGGATCCATTTCAGGATATTCTTAGTTTTCCTGACAATGTTTTG GTCCAGAATGATCAAGTGGAAAACGGTGCTTGTTACATGAATGATGACAATGTCAAGAGATCTGATTTTGGAGAGTGGGT TGATCAACTAATGACAATTGATGATTCGCAGCACCCAAATTGGAGTCAGCTTCTTGGTGATGACAATGTAGCAGAACCAA AGCCAAAGGTTTGTCTCTCAAGCTGGTTTTGAATGGTACTGTAATTGCTTTCTCTTACCTGTAAAATTAATCGAACATGT AGGTGGAATCCCATTCCCGGATGTCTCATTTGTGGTCTAAGAGCCATGGTTTTCATACTTGAACTTGTTATTGAGGCACA TGAAAAACAAGTCAATTTAATCTGTTTGGATACCCGTTACAAAGTATGAAAACGGGAAAATAACACCGATGCACTTTTTG TTGAATGAGGAAGCTGTTACCTCAACAAGAAGTGTCTCGGGATGTGTTATTTTTTCATTTTCATACTCTCTAACGGGCAT CCAAACAGAATCTAAACAATGTGTATAAATCTCAATAATTATGGACATAGTCATAAAAAATGCAGTCCTCTATATTTAAG CTCCCTTTTTTTCAGCTTTCTGCATGGAGAGTGTTGTGATTTATTTTGGTACATTTTGATGCTGAGTTCTATTTTCAATT TATTGTCACCGTGTGCATTTGTGTATATACTTCATCACCTATTCCCTGTTATGCTGTTGATGTGGTTCTTAAAAGTTTGA ATTCTATTTTTATGTGTACAGTACTTTTTGTCAATGGTGCATTTTATTTATTTGTCTATTTTTATTGTTCAAGCCACAAA AACATATCCTACACTTTTAATGCAGGCAATCCAGGTTTCCCCGCTGCAGCAGCTATCATCTGGAGAAGTTAGTGGTCTTT CTAATTCAGCATCAACTGCTTCACAATCTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTTGTGGAAGCG GTCAATCACCTTGGTGGTAGTGAGAGTATGTTTGCTTCTCATTACTCTCATACTTCTTGACTTTCTCTCTCGAATGTTTC TTGTCATCTAATGATGTTAACATGCAGAGGCTACGCCAAAGGGGGTTTTGAATCGGATGAAAGTCGAGGGCCTTACCATC TATCATGTAAAAAGCCACCTACAGGTACATCAATGATTTATCTTCCTCTTAAACTTCTTGTGGGTGTGTGTCAGTTTATT TAATCTAATGTTTTTCGAAAAATTACTTGTTCTTTTAATTTCAGAAATATAGAACCGCTAGATACAAACCTGAGTCATCA GAAGGTATGAAAAAGTGTACTTATGACTTATGTTGTTCATATAATCAAGTTTATTACCAAGTATTGTTCTGATTTTTGGG TTTTTGAAGTTTCAATTAAGATGTTTTGTTTGCAATATCAATTGCATTTTTGTCTTGTGCTTTTTTATTTTCTTGACCCT ATGTTTGGATTGAGAGAAACAAAATATGGAGGAAACGGGCATTTTAAATTTTAATAATTGGAAAATGTCTCTGATTTGTT GATGAAAAAATGAGATGTAAAGATTAGAAAGAGTTATAAAACAAAAAGTCAAAATTTTCTCATCATTTCGAAGTTTGAAT TTTTCTCCCCTTTTCTCTCATCTAAACAAGGGTTAATTGTTAAATGCTTTTTTTCTCCTATTATTTTTGTTACGTTTTAA TAATACGATTTCTTTAGCATTTATGTACATAAGAATCACACAGAAGTTTCTTTTCTTTTCTTTTTTCAAAAGTATGAGAG TAAGAATGTGAATGGGATCCTCTTCTCTACTTGCAGGAACTTCTGAGGCAAAAATTACTTCAATCGATGAAATGAAATCG TTAGACTTGAAAACGTGAGTTGTCTATCTATATCACTTTTTAGCTATTCGTCAACATGTGTCCACTGATTTCTGTTATTT GGTGTGGATCATTTGCTCTTGCATGGCACTGTGGCAGAATGTACTATTCACTCATTATTGTTATATATTTTTTGAATTTA AAATATAATCTAATGCAGATTGGTACAAATTAGATGGTCCAAACAAGTTTGATTTTCCCCTTTGCTATGATACTTTTTTT CTTATTTTGATTAGAAACCATAATTCCATGAGATTCTCTTATCTTGAACATTAATGCTCAATAACATGCTCCGGATTTCG GTTGCAGGAGTAAGGGGATCACTGAAGCATTACGGTTACAGATGGAACTCCAGAAGCGGCTTCACGAACAACTTGAGGTA CTTTATTAGTAGTTTTGAGATTCACTGTGTAATCCAGAGGAGAGTTTTATTAGCTTTCTCTTTCTTTCTTGTTGGGAAGA CTGAAGAGAGCAATCTTAAGCTTTGGCATGTTCTCATGTTCTAACTGTTATGCAGATTCAACGAAACTTACAGATTCAAA TTGAAAACCAAGGTAAACATCTGCAGATGATGTTTGAGCAACAGAGAGGAATGGTTGAGAGCAAGGTTAAGGGCCCCTCC TCCCCTTCGGATGTGCCTTCTGCTGCACTATCAGACACGGCGCTACCTTCTTCTCCAATACACAATTTAGAAACCTCAAA TGAGGAACATGACAAGTTAACAAGCAATAATAGCAATCTGAAAATCATGCCTGAAGAAAGTTCCAAGGATGCAAGCAACA AGCAAATAGATGGTGGAGCTGAAGTTACCAACGAAGATGAAGCAGTAGATGCAGCACCACCCCCAAAACGGGCAAAGATT TGATGAAAGCAGAATCAGGGTTTTAAGTTGCGGTTGTGGAATTGCAGACAATACTGTTTGATGTGGCCGCAACTGCAGTC GCAATGCTGTTGCGGTGACGCCAAAATCATAATTTAAAACCCTGAGTATAATTATTTTGTGCTCCTAGTGTTATTCTGCT GGAATTTCCCTTTCTGCTGATCATAATGATATACTCAATTTGCACAGCAGTTATGATTCTAGCTTCATTGTTTGGAATAT AACTAATTGTCTTCCCTAGATTGTTTTTATATTAGTGGACATGTTTATAGAGACTGTGGAACTTGTAGAAATATTGTTGG ATCAACTAGATGGTTATGACAGATTTATAAGCAACATTAATTCTAAGGGTTTCGTTTTTTTTTCTTTTTTCCTTTTGGCT ATTGCGCGAGTTCTTGTGTTTTTGATTTGGTGTTGAAAACAGAGTTGATAATGTGGTACTTGGATCCTCTATGTGTATGT GCTAGGTTGGACTTCATGTATAGACACGTTTGTCCCAAAAGCTATACCTTTCTTGTTATTAGTGATTTTGGTACCTGAAG TGGTTTACAGAAGTGAAATCATTTAGAACAACGGTAGACAAGTAGTTCCAAGTACATTATGTAGAAAGCTTGTTAGTGTT AGGGCATGAGATGCCTTAAAACTCGGGGCGATCTTTACATTGAGTTATGATAGTAAACCACAAATAGATGGAACACCACA TTTTTCATGTAAGTTCTTAAGACATTGGATGTGAGCCTTCTCACTTATAAATTGTTTGATACTTAATTTTCTCTTTAAGA CTTGTAAGTCACACCTTGTATCCCAA
CDS sequence (LotjaGi1g1v0784100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATCTTTGCCTGCTCTTCACTCTCCCCTTGAGAACAAGTATATGAAGCCACCCGATTCTTTCCTTGCAAGAGATCT GGCTGCAAATCCTGCCTCAAAACAAGCTACATCATCGAATATGACCAGAAGTGGTGAACAGATGTTTTCATCCCCTGCTG AATGTCCTGGTGATATCCGCTTTCATGCTGTTTCACAGCATGACAGGCAATATCGAGATTCTCCATTCATTTCTCCAACA TTAGGTGGCAATGTGACCTCCGAAATACATTCAACGGCATTGATTTCTCACCCTCAAGAAAACGATATTTCCTGGGGACC GGATCCATTTCAGGATATTCTTAGTTTTCCTGACAATGTTTTGGTCCAGAATGATCAAGTGGAAAACGGTGCTTGTTACA TGAATGATGACAATGTCAAGAGATCTGATTTTGGAGAGTGGGTTGATCAACTAATGACAATTGATGATTCGCAGCACCCA AATTGGAGTCAGCTTCTTGGTGATGACAATGTAGCAGAACCAAAGCCAAAGGCAATCCAGGTTTCCCCGCTGCAGCAGCT ATCATCTGGAGAAGTTAGTGGTCTTTCTAATTCAGCATCAACTGCTTCACAATCTAAGCCTAGAATGCGTTGGACTCCAG AACTTCATGAGGCCTTTGTGGAAGCGGTCAATCACCTTGGTGGTAGTGAGAAGGCTACGCCAAAGGGGGTTTTGAATCGG ATGAAAGTCGAGGGCCTTACCATCTATCATGTAAAAAGCCACCTACAGAAATATAGAACCGCTAGATACAAACCTGAGTC ATCAGAAGGAACTTCTGAGGCAAAAATTACTTCAATCGATGAAATGAAATCGTTAGACTTGAAAACGAGTAAGGGGATCA CTGAAGCATTACGGTTACAGATGGAACTCCAGAAGCGGCTTCACGAACAACTTGAGATTCAACGAAACTTACAGATTCAA ATTGAAAACCAAGGTAAACATCTGCAGATGATGTTTGAGCAACAGAGAGGAATGGTTGAGAGCAAGGTTAAGGGCCCCTC CTCCCCTTCGGATGTGCCTTCTGCTGCACTATCAGACACGGCGCTACCTTCTTCTCCAATACACAATTTAGAAACCTCAA ATGAGGAACATGACAAGTTAACAAGCAATAATAGCAATCTGAAAATCATGCCTGAAGAAAGTTCCAAGGATGCAAGCAAC AAGCAAATAGATGGTGGAGCTGAAGTTACCAACGAAGATGAAGCAGTAGATGCAGCACCACCCCCAAAACGGGCAAAGAT TTGA
Protein sequence (LotjaGi1g1v0784100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSLPALHSPLENKYMKPPDSFLARDLAANPASKQATSSNMTRSGEQMFSSPAECPGDIRFHAVSQHDRQYRDSPFISPT LGGNVTSEIHSTALISHPQENDISWGPDPFQDILSFPDNVLVQNDQVENGACYMNDDNVKRSDFGEWVDQLMTIDDSQHP NWSQLLGDDNVAEPKPKAIQVSPLQQLSSGEVSGLSNSASTASQSKPRMRWTPELHEAFVEAVNHLGGSEKATPKGVLNR MKVEGLTIYHVKSHLQKYRTARYKPESSEGTSEAKITSIDEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRNLQIQ IENQGKHLQMMFEQQRGMVESKVKGPSSPSDVPSAALSDTALPSSPIHNLETSNEEHDKLTSNNSNLKIMPEESSKDASN KQIDGGAEVTNEDEAVDAAPPPKRAKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 30 | 51 | 22 | - | – | |
| MobiDBLite | 31 | 49 | 19 | - | – | |
| PANTHER | 38 | 395 | 358 | 8.7E-131 | – | |
| PANTHER | 38 | 395 | 358 | 8.7E-131 | – | |
| MobiDBLite | 183 | 209 | 27 | - | – | |
| MobiDBLite | 183 | 208 | 26 | - | – | |
| Gene3D | 202 | 264 | 63 | 5.0E-28 | – | |
| ProSiteProfiles | 203 | 263 | 61 | 12.812 | ||
| SUPERFAMILY | 204 | 260 | 57 | 3.58E-17 | ||
| TIGRFAM | 206 | 260 | 55 | 4.3E-25 | ||
| Pfam | 208 | 259 | 52 | 1.1E-8 | ||
| Pfam | 293 | 336 | 44 | 3.7E-20 | ||
| Coils | 294 | 314 | 21 | - | – | |
| MobiDBLite | 337 | 427 | 91 | - | – | |
| MobiDBLite | 347 | 370 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0784100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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